RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 MT1HP80294 61 aa2.09□□□□□ -2.07
RBM39-220ENST00000455343 RPL18AQ02543 176 aaKnown RBP2.09□□□□□ -2.07
RBM39-220ENST00000455343 SS18Q15532 418 aa2.09□□□□□ -2.07
RBM39-220ENST00000455343 KRTAP13-2Q52LG2 175 aa2.09□□□□□ -2.07
RBM39-220ENST00000455343 LINC00242Q5T6M2 205 aa2.09□□□□□ -2.07
RBM39-220ENST00000455343 AMMECR1LQ6DCA0 310 aa2.09□□□□□ -2.07
RBM39-220ENST00000455343 EIF5AL1Q6IS14 154 aaKnown RBP2.09□□□□□ -2.07
RBM39-220ENST00000455343 MZT2BQ6NZ67 158 aa2.09□□□□□ -2.07
RBM39-220ENST00000455343 RNASEKQ6P5S7 137 aaKnown RBP2.09□□□□□ -2.07
RBM39-220ENST00000455343 MRPL52Q86TS9 123 aaKnown RBP2.09□□□□□ -2.07
RBM39-220ENST00000455343 TYMSOSQ8TAI1 123 aa2.09□□□□□ -2.07
RBM39-220ENST00000455343 PPDPFQ9H3Y8 114 aa2.09□□□□□ -2.07
RBM39-220ENST00000455343 MRPL35Q9NZE8 188 aaKnown RBP2.09□□□□□ -2.07
RBM39-220ENST00000455343 CCDC160A6NGH7 325 aa2.08□□□□□ -2.08
RBM39-220ENST00000455343 A8MU10 97 aa2.08□□□□□ -2.08
RBM39-220ENST00000455343 C1orf196B1AJZ1 125 aa2.08□□□□□ -2.08
RBM39-220ENST00000455343 F2Z2F3 143 aa2.08□□□□□ -2.08
RBM39-220ENST00000455343 INMT-MINDY4F8WBC2 141 aa2.08□□□□□ -2.08
RBM39-220ENST00000455343 F8WDY8 70 aa2.08□□□□□ -2.08
RBM39-220ENST00000455343 COX7A2LO14548 114 aa2.08□□□□□ -2.08
RBM39-220ENST00000455343 APCSP02743 223 aa2.08□□□□□ -2.08
RBM39-220ENST00000455343 S100A9P06702 114 aaKnown RBP2.08□□□□□ -2.08
RBM39-220ENST00000455343 AKR1C3P42330 323 aa2.08□□□□□ -2.08
RBM39-220ENST00000455343 TMEM241Q24JQ0 296 aa2.08□□□□□ -2.08
RBM39-220ENST00000455343 LINC00173Q6ZV60 143 aa2.08□□□□□ -2.08
RBM39-220ENST00000455343 BAGE2Q86Y30 109 aa2.08□□□□□ -2.08
RBM39-220ENST00000455343 C9orf62Q8N4C0 152 aa2.08□□□□□ -2.08
RBM39-220ENST00000455343 GATD1Q8NB37 220 aa2.08□□□□□ -2.08
RBM39-220ENST00000455343 FAM210AQ96ND0 272 aa2.08□□□□□ -2.08
RBM39-220ENST00000455343 IMMP2LQ96T52 175 aa2.08□□□□□ -2.08
RBM39-220ENST00000455343 CCDC32Q9BV29 185 aa2.08□□□□□ -2.08
RBM39-220ENST00000455343 CNFNQ9BYD5 112 aa2.08□□□□□ -2.08
RBM39-220ENST00000455343 SMDT1Q9H4I9 107 aa2.08□□□□□ -2.08
RBM39-220ENST00000455343 FCGBPQ9Y6R7 5405 aaPredicted RBP2.07□□□□□ -2.08
RBM39-220ENST00000455343 IGLV9-49A0A0B4J1Y8 123 aa2.07□□□□□ -2.08
RBM39-220ENST00000455343 SDHAF1A6NFY7 115 aa2.07□□□□□ -2.08
RBM39-220ENST00000455343 M0QXV9 152 aa2.07□□□□□ -2.08
RBM39-220ENST00000455343 NUPR1O60356 82 aa2.07□□□□□ -2.08
RBM39-220ENST00000455343 TRGC1P0CF51 173 aa2.07□□□□□ -2.08
RBM39-220ENST00000455343 UBE2BP63146 152 aa2.07□□□□□ -2.08
RBM39-220ENST00000455343 UBE2V1Q13404 147 aa2.07□□□□□ -2.08
RBM39-220ENST00000455343 KRTAP5-2Q701N4 177 aa2.07□□□□□ -2.08
RBM39-220ENST00000455343 FAM19A5Q7Z5A7 132 aaPredicted RBP2.07□□□□□ -2.08
RBM39-220ENST00000455343 LINC00304Q8N9R0 145 aa2.07□□□□□ -2.08
RBM39-220ENST00000455343 OR2D3Q8NGH3 330 aa2.07□□□□□ -2.08
RBM39-220ENST00000455343 OR10D4PQ8NGN7 298 aa2.07□□□□□ -2.08
RBM39-220ENST00000455343 STOML3Q8TAV4 291 aa2.07□□□□□ -2.08
RBM39-220ENST00000455343 RPL39LQ96EH5 51 aaKnown RBP2.07□□□□□ -2.08
RBM39-220ENST00000455343 TMEM101Q96IK0 257 aa2.07□□□□□ -2.08
RBM39-220ENST00000455343 BTF3L4Q96K17 158 aa2.07□□□□□ -2.08
RBM39-220ENST00000455343 C6orf48Q9UBA6 75 aa2.07□□□□□ -2.08
RBM39-220ENST00000455343 CSDC2Q9Y534 153 aaKnown RBP2.07□□□□□ -2.08
RBM39-220ENST00000455343 MACF1Q9UPN3 7388 aaKnown RBP2.06□□□□□ -2.08
RBM39-220ENST00000455343 IGHV3OR16-9A0A0B4J2B5 98 aa2.06□□□□□ -2.08
RBM39-220ENST00000455343 TRBV6-5A0A0K0K1A5 114 aa2.06□□□□□ -2.08
RBM39-220ENST00000455343 MAP1LC3B2A6NCE7 125 aa2.06□□□□□ -2.08
RBM39-220ENST00000455343 I3L3M4 83 aa2.06□□□□□ -2.08
RBM39-220ENST00000455343 NDUFA1O15239 70 aa2.06□□□□□ -2.08
RBM39-220ENST00000455343 CTRLP40313 264 aa2.06□□□□□ -2.08
RBM39-220ENST00000455343 POLR2KP53803 58 aaKnown RBP2.06□□□□□ -2.08
RBM39-220ENST00000455343 RPS20P60866 119 aaKnown RBP2.06□□□□□ -2.08
RBM39-220ENST00000455343 SPAG11BQ08648 103 aa2.06□□□□□ -2.08
RBM39-220ENST00000455343 KIAA0087Q14695 138 aa2.06□□□□□ -2.08
RBM39-220ENST00000455343 FAM229BQ4G0N7 80 aa2.06□□□□□ -2.08
RBM39-220ENST00000455343 GAGE2EQ4V326 116 aa2.06□□□□□ -2.08
RBM39-220ENST00000455343 C9orf129Q5T035 196 aaKnown RBP2.06□□□□□ -2.08
RBM39-220ENST00000455343 CST9LP1Q5W188 147 aa2.06□□□□□ -2.08
RBM39-220ENST00000455343 RPL7L1Q6DKI1 246 aaKnown RBP2.06□□□□□ -2.08
RBM39-220ENST00000455343 GAGE2AQ6NT46 116 aa2.06□□□□□ -2.08
RBM39-220ENST00000455343 LYZL1Q6UWQ5 148 aa2.06□□□□□ -2.08
RBM39-220ENST00000455343 UNQ6190/PRO20217Q6UXQ8 127 aa2.06□□□□□ -2.08
RBM39-220ENST00000455343 TMUB2Q71RG4 321 aa2.06□□□□□ -2.08
RBM39-220ENST00000455343 FP248Q71RG6 208 aaPredicted RBP2.06□□□□□ -2.08
RBM39-220ENST00000455343 C5orf38Q86SI9 138 aa2.06□□□□□ -2.08
RBM39-220ENST00000455343 MRAP2Q96G30 205 aa2.06□□□□□ -2.08
RBM39-220ENST00000455343 MARVELD1Q9BSK0 173 aa2.06□□□□□ -2.08
RBM39-220ENST00000455343 MAP1LC3BQ9GZQ8 125 aa2.06□□□□□ -2.08
RBM39-220ENST00000455343 ANAPC11Q9NYG5 84 aa2.06□□□□□ -2.08
RBM39-220ENST00000455343 GAGE2DQ9UEU5 116 aa2.06□□□□□ -2.08
RBM39-220ENST00000455343 SYNE2Q8WXH0 6885 aaKnown RBP2.06□□□□□ -2.08
RBM39-220ENST00000455343 TRAV13-1A0A0B4J241 112 aa2.05□□□□□ -2.08
RBM39-220ENST00000455343 TRBV27A0A0K0K1C4 114 aa2.05□□□□□ -2.08
RBM39-220ENST00000455343 C7orf77A4D0Y5 90 aa2.05□□□□□ -2.08
RBM39-220ENST00000455343 NDUFC2-KCTD14E9PQ53 114 aa2.05□□□□□ -2.08
RBM39-220ENST00000455343 BCE1O60756 84 aa2.05□□□□□ -2.08
RBM39-220ENST00000455343 RPL35P42766 123 aaKnown RBP2.05□□□□□ -2.08
RBM39-220ENST00000455343 RPL28P46779 137 aaKnown RBP2.05□□□□□ -2.08
RBM39-220ENST00000455343 FOXA3P55318 350 aaPredicted RBP2.05□□□□□ -2.08
RBM39-220ENST00000455343 IFITM3Q01628 133 aa2.05□□□□□ -2.08
RBM39-220ENST00000455343 AKR1C8PQ5T2L2 129 aa2.05□□□□□ -2.08
RBM39-220ENST00000455343 TEX261Q6UWH6 196 aa2.05□□□□□ -2.08
RBM39-220ENST00000455343 KRTAP13-1Q8IUC0 172 aa2.05□□□□□ -2.08
RBM39-220ENST00000455343 Q8N377 158 aa2.05□□□□□ -2.08
RBM39-220ENST00000455343 FAM104AQ969W3 186 aa2.05□□□□□ -2.08
RBM39-220ENST00000455343 TPPP3Q9BW30 176 aa2.05□□□□□ -2.08
RBM39-220ENST00000455343 RNASE7Q9H1E1 156 aaKnown RBP2.05□□□□□ -2.08
RBM39-220ENST00000455343 CYTL1Q9NRR1 136 aa2.05□□□□□ -2.08
RBM39-220ENST00000455343 UBE2D4Q9Y2X8 147 aa2.05□□□□□ -2.08
RBM39-220ENST00000455343 C22orf24Q9Y442 160 aa2.05□□□□□ -2.08
RBM39-220ENST00000455343 ALG5Q9Y673 324 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms