RNA–Protein interactions for RNA: ENST00000454137.5

MSH6-205, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 725 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-205ENST00000454137 NOP10Q9NPE3 64 aaKnown RBP4.27□□□□□ -1.73
MSH6-205ENST00000454137 PRO1854Q9UHT4 67 aa4.27□□□□□ -1.73
MSH6-205ENST00000454137 TNFRSF18Q9Y5U5 241 aa4.27□□□□□ -1.73
MSH6-205ENST00000454137 A0A0J9YXV3 536 aa4.26□□□□□ -1.73
MSH6-205ENST00000454137 TINCRA0A1B0GVN0 87 aa4.26□□□□□ -1.73
MSH6-205ENST00000454137 K7EQD1 137 aa4.26□□□□□ -1.73
MSH6-205ENST00000454137 TCL1BO95988 128 aa4.26□□□□□ -1.73
MSH6-205ENST00000454137 FOXI1Q12951 378 aa4.26□□□□□ -1.73
MSH6-205ENST00000454137 DEFB135Q30KP9 77 aa4.26□□□□□ -1.73
MSH6-205ENST00000454137 XP32Q5T750 250 aa4.26□□□□□ -1.73
MSH6-205ENST00000454137 DAZ4Q86SG3 579 aaKnown RBP4.26□□□□□ -1.73
MSH6-205ENST00000454137 TEN1Q86WV5 123 aa4.26□□□□□ -1.73
MSH6-205ENST00000454137 DEFB104AQ8WTQ1 72 aa4.26□□□□□ -1.73
MSH6-205ENST00000454137 OPRPNQ99935 248 aaPredicted RBP4.26□□□□□ -1.73
MSH6-205ENST00000454137 TIMM21Q9BVV7 248 aa4.26□□□□□ -1.73
MSH6-205ENST00000454137 GTSF1LQ9H1H1 148 aa4.26□□□□□ -1.73
MSH6-205ENST00000454137 DAZ3Q9NR90 486 aaKnown RBP4.26□□□□□ -1.73
MSH6-205ENST00000454137 TRGV2A0A075B6R0 118 aa4.25□□□□□ -1.73
MSH6-205ENST00000454137 IGHV4-28A0A0C4DH34 117 aa4.25□□□□□ -1.73
MSH6-205ENST00000454137 IGHV1-58A0A0C4DH39 117 aa4.25□□□□□ -1.73
MSH6-205ENST00000454137 A0A0J9YXY3 114 aa4.25□□□□□ -1.73
MSH6-205ENST00000454137 A4D1N5 150 aa4.25□□□□□ -1.73
MSH6-205ENST00000454137 TIMM17BO60830 172 aa4.25□□□□□ -1.73
MSH6-205ENST00000454137 GAGE7O76087 117 aa4.25□□□□□ -1.73
MSH6-205ENST00000454137 IGHV3-33P01772 117 aa4.25□□□□□ -1.73
MSH6-205ENST00000454137 GAGE12FP0CL80 117 aa4.25□□□□□ -1.73
MSH6-205ENST00000454137 GAGE12GP0CL81 117 aa4.25□□□□□ -1.73
MSH6-205ENST00000454137 GAGE12IP0CL82 117 aa4.25□□□□□ -1.73
MSH6-205ENST00000454137 SPART-AS1P0CW21 52 aa4.25□□□□□ -1.73
MSH6-205ENST00000454137 SCGB1C2P0DMR2 95 aa4.25□□□□□ -1.73
MSH6-205ENST00000454137 IGHV3-30-3P0DP02 117 aa4.25□□□□□ -1.73
MSH6-205ENST00000454137 RPL36AP83881 106 aaKnown RBP4.25□□□□□ -1.73
MSH6-205ENST00000454137 FHL2Q14192 279 aa4.25□□□□□ -1.73
MSH6-205ENST00000454137 NBEAL2Q6ZNJ1 2754 aa4.25□□□□□ -1.73
MSH6-205ENST00000454137 MTURNQ8N3F0 131 aa4.25□□□□□ -1.73
MSH6-205ENST00000454137 RPL36ALQ969Q0 106 aaKnown RBP4.25□□□□□ -1.73
MSH6-205ENST00000454137 WWC2-AS2Q96NR7 200 aa4.25□□□□□ -1.73
MSH6-205ENST00000454137 CHCHD7Q9BUK0 85 aa4.25□□□□□ -1.73
MSH6-205ENST00000454137 SPANXDQ9BXN6 97 aa4.25□□□□□ -1.73
MSH6-205ENST00000454137 SPANXCQ9NY87 97 aa4.25□□□□□ -1.73
MSH6-205ENST00000454137 Q9UF83 564 aa4.25□□□□□ -1.73
MSH6-205ENST00000454137 ERG28Q9UKR5 140 aa4.25□□□□□ -1.73
MSH6-205ENST00000454137 FBN3Q75N90 2809 aa4.25□□□□□ -1.73
MSH6-205ENST00000454137 H3BNG1 76 aa4.24□□□□□ -1.73
MSH6-205ENST00000454137 H7C423 109 aa4.24□□□□□ -1.73
MSH6-205ENST00000454137 LINC00694P0DN24 101 aa4.24□□□□□ -1.73
MSH6-205ENST00000454137 SMAGPQ0VAQ4 97 aa4.24□□□□□ -1.73
MSH6-205ENST00000454137 MIAQ16674 131 aa4.24□□□□□ -1.73
MSH6-205ENST00000454137 MUSTN1Q8IVN3 82 aa4.24□□□□□ -1.73
MSH6-205ENST00000454137 FAM104AQ969W3 186 aa4.24□□□□□ -1.73
MSH6-205ENST00000454137 VSIG2Q96IQ7 327 aa4.24□□□□□ -1.73
MSH6-205ENST00000454137 LINC01600Q96MT4 127 aa4.24□□□□□ -1.73
MSH6-205ENST00000454137 LITAFQ99732 161 aa4.24□□□□□ -1.73
MSH6-205ENST00000454137 TM2D3Q9BRN9 247 aa4.24□□□□□ -1.73
MSH6-205ENST00000454137 PRO0255Q9UI72 69 aa4.24□□□□□ -1.73
MSH6-205ENST00000454137 UBE2D4Q9Y2X8 147 aa4.24□□□□□ -1.73
MSH6-205ENST00000454137 NOTCH1P46531 2555 aa4.24□□□□□ -1.73
MSH6-205ENST00000454137 MGAM2Q2M2H8 2515 aa4.24□□□□□ -1.73
MSH6-205ENST00000454137 IGHV3-64A0A075B6Q5 118 aa4.23□□□□□ -1.73
MSH6-205ENST00000454137 IGLV5-45A0A087WSX0 123 aa4.23□□□□□ -1.73
MSH6-205ENST00000454137 TRAV26-1A0A087WT03 109 aa4.23□□□□□ -1.73
MSH6-205ENST00000454137 TRGV4A0A0C4DH28 118 aa4.23□□□□□ -1.73
MSH6-205ENST00000454137 TRBV30A0A0K0K1B3 111 aa4.23□□□□□ -1.73
MSH6-205ENST00000454137 K7EIL1 84 aa4.23□□□□□ -1.73
MSH6-205ENST00000454137 ATP5G1P05496 136 aa4.23□□□□□ -1.73
MSH6-205ENST00000454137 IFITM1P13164 125 aa4.23□□□□□ -1.73
MSH6-205ENST00000454137 ATXN8Q156A1 80 aa4.23□□□□□ -1.73
MSH6-205ENST00000454137 FAM222AQ5U5X8 452 aa4.23□□□□□ -1.73
MSH6-205ENST00000454137 ZFAND6Q6FIF0 208 aa4.23□□□□□ -1.73
MSH6-205ENST00000454137 DGAT2L7PQ6IED9 249 aa4.23□□□□□ -1.73
MSH6-205ENST00000454137 SFTA2Q6UW10 78 aa4.23□□□□□ -1.73
MSH6-205ENST00000454137 Q6ZUT4 128 aa4.23□□□□□ -1.73
MSH6-205ENST00000454137 ANKRD29Q8N6D5 301 aa4.23□□□□□ -1.73
MSH6-205ENST00000454137 GEMIN7Q9H840 131 aaKnown RBP4.23□□□□□ -1.73
MSH6-205ENST00000454137 NDUFA12Q9UI09 145 aa4.23□□□□□ -1.73
MSH6-205ENST00000454137 CSDC2Q9Y534 153 aaKnown RBP4.23□□□□□ -1.73
MSH6-205ENST00000454137 DNHD1Q96M86 4753 aa4.23□□□□□ -1.73
MSH6-205ENST00000454137 IGHV3-38A0A0C4DH36 116 aa4.22□□□□□ -1.73
MSH6-205ENST00000454137 A0A1B0GV72 72 aa4.22□□□□□ -1.73
MSH6-205ENST00000454137 TMEM262E9PQX1 116 aa4.22□□□□□ -1.73
MSH6-205ENST00000454137 NDUFA1O15239 70 aa4.22□□□□□ -1.73
MSH6-205ENST00000454137 SLC25A20O43772 301 aa4.22□□□□□ -1.73
MSH6-205ENST00000454137 DAD1P61803 113 aa4.22□□□□□ -1.73
MSH6-205ENST00000454137 Q1RN00 199 aa4.22□□□□□ -1.73
MSH6-205ENST00000454137 CARD19Q96LW7 228 aa4.22□□□□□ -1.73
MSH6-205ENST00000454137 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.21□□□□□ -1.74
MSH6-205ENST00000454137 TRAV8-3A0A0A6YYJ7 113 aa4.21□□□□□ -1.74
MSH6-205ENST00000454137 TRBV10-2A0A0K0K1G8 114 aa4.21□□□□□ -1.74
MSH6-205ENST00000454137 IGKV2-29A2NJV5 120 aaPredicted RBP4.21□□□□□ -1.74
MSH6-205ENST00000454137 GAGE12JA6NER3 117 aa4.21□□□□□ -1.74
MSH6-205ENST00000454137 C9JAW5 83 aa4.21□□□□□ -1.74
MSH6-205ENST00000454137 SPINK8P0C7L1 97 aa4.21□□□□□ -1.74
MSH6-205ENST00000454137 DEFB130BP0DP73 79 aa4.21□□□□□ -1.74
MSH6-205ENST00000454137 DEFB130AP0DP74 79 aa4.21□□□□□ -1.74
MSH6-205ENST00000454137 HERVK_113P63121 156 aa4.21□□□□□ -1.74
MSH6-205ENST00000454137 GAGE4Q13068 117 aa4.21□□□□□ -1.74
MSH6-205ENST00000454137 GAGE5Q13069 117 aa4.21□□□□□ -1.74
MSH6-205ENST00000454137 LINC01620Q4KN68 170 aa4.21□□□□□ -1.74
MSH6-205ENST00000454137 CEMP1Q6PRD7 247 aaPredicted RBP4.21□□□□□ -1.74
MSH6-205ENST00000454137 FAM19A3Q7Z5A8 133 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms