RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 OSTCQ9NRP0 149 aa6.68□□□□□ -1.34
USP1-204ENST00000452143 TRAV13-1A0A0B4J241 112 aa6.67□□□□□ -1.34
USP1-204ENST00000452143 SPAG11BQ08648 103 aa6.67□□□□□ -1.34
USP1-204ENST00000452143 ALKAL2Q6UX46 152 aa6.67□□□□□ -1.34
USP1-204ENST00000452143 Q6ZUT4 128 aa6.67□□□□□ -1.34
USP1-204ENST00000452143 ZNF727A8MUV8 499 aa6.66□□□□□ -1.34
USP1-204ENST00000452143 F8WDY8 70 aa6.66□□□□□ -1.34
USP1-204ENST00000452143 SMKR1H3BMG3 65 aa6.66□□□□□ -1.34
USP1-204ENST00000452143 TCAPO15273 167 aa6.66□□□□□ -1.34
USP1-204ENST00000452143 RNASE13Q5GAN3 156 aaKnown RBP6.66□□□□□ -1.34
USP1-204ENST00000452143 C1orf137Q5JT78 98 aa6.66□□□□□ -1.34
USP1-204ENST00000452143 EIF5A2Q9GZV4 153 aaKnown RBP6.66□□□□□ -1.34
USP1-204ENST00000452143 MRPL35Q9NZE8 188 aaKnown RBP6.66□□□□□ -1.34
USP1-204ENST00000452143 LPAP08519 4548 aa6.65□□□□□ -1.34
USP1-204ENST00000452143 RPL32P62910 135 aaKnown RBP6.65□□□□□ -1.34
USP1-204ENST00000452143 C5orf38Q86SI9 138 aa6.65□□□□□ -1.34
USP1-204ENST00000452143 DIRC1Q969H9 104 aa6.65□□□□□ -1.34
USP1-204ENST00000452143 IMMP2LQ96T52 175 aa6.65□□□□□ -1.34
USP1-204ENST00000452143 C20orf78Q9BR46 151 aa6.65□□□□□ -1.34
USP1-204ENST00000452143 NAT8BQ9UHF3 227 aa6.65□□□□□ -1.34
USP1-204ENST00000452143 V9GYV3 84 aa6.65□□□□□ -1.34
USP1-204ENST00000452143 TRBV24-1A0A075B6N3 115 aa6.64□□□□□ -1.35
USP1-204ENST00000452143 LINC00862A6NCI5 91 aa6.64□□□□□ -1.35
USP1-204ENST00000452143 PHF5AQ7RTV0 110 aaKnown RBP6.64□□□□□ -1.35
USP1-204ENST00000452143 IGHV3OR16-9A0A0B4J2B5 98 aa6.63□□□□□ -1.35
USP1-204ENST00000452143 A0A1B0GW15 77 aa6.63□□□□□ -1.35
USP1-204ENST00000452143 NDUFA1O15239 70 aa6.63□□□□□ -1.35
USP1-204ENST00000452143 IGLV7-43P04211 117 aa6.63□□□□□ -1.35
USP1-204ENST00000452143 TLX1NBP0CAT3 122 aa6.63□□□□□ -1.35
USP1-204ENST00000452143 MRPL51Q4U2R6 128 aaKnown RBP6.63□□□□□ -1.35
USP1-204ENST00000452143 LCE5AQ5TCM9 118 aa6.63□□□□□ -1.35
USP1-204ENST00000452143 FAM104BQ5XKR9 115 aa6.63□□□□□ -1.35
USP1-204ENST00000452143 AKAP14Q86UN6 197 aa6.63□□□□□ -1.35
USP1-204ENST00000452143 ORAOV1Q8WV07 137 aa6.63□□□□□ -1.35
USP1-204ENST00000452143 OPRPNQ99935 248 aaPredicted RBP6.63□□□□□ -1.35
USP1-204ENST00000452143 SPANXA1Q9NS26 97 aa6.63□□□□□ -1.35
USP1-204ENST00000452143 H0Y9J4 135 aa6.62□□□□□ -1.35
USP1-204ENST00000452143 SRP19P09132 144 aaKnown RBP6.62□□□□□ -1.35
USP1-204ENST00000452143 MRPS36P82909 103 aaKnown RBP6.62□□□□□ -1.35
USP1-204ENST00000452143 TMEM241Q24JQ0 296 aa6.62□□□□□ -1.35
USP1-204ENST00000452143 FAM74A3Q4VXF1 159 aa6.62□□□□□ -1.35
USP1-204ENST00000452143 SMIM2Q9BVW6 85 aa6.62□□□□□ -1.35
USP1-204ENST00000452143 MUC2Q02817 5179 aa6.61□□□□□ -1.35
USP1-204ENST00000452143 CKS2P33552 79 aa6.61□□□□□ -1.35
USP1-204ENST00000452143 RPL39P62891 51 aaKnown RBP6.61□□□□□ -1.35
USP1-204ENST00000452143 HBBP68871 147 aa6.61□□□□□ -1.35
USP1-204ENST00000452143 IGLV1-50A0A075B6I6 118 aa6.6□□□□□ -1.35
USP1-204ENST00000452143 A0A087WZ39 114 aa6.6□□□□□ -1.35
USP1-204ENST00000452143 SMIM27A0A1W2PRY6 76 aa6.6□□□□□ -1.35
USP1-204ENST00000452143 IFITM10A6NMD0 228 aa6.6□□□□□ -1.35
USP1-204ENST00000452143 KRTAP9-7A8MTY7 169 aa6.6□□□□□ -1.35
USP1-204ENST00000452143 TNFRSF6BO95407 300 aa6.6□□□□□ -1.35
USP1-204ENST00000452143 RPL23P62829 140 aaKnown RBP6.6□□□□□ -1.35
USP1-204ENST00000452143 PRR26Q8N8Z3 221 aa6.6□□□□□ -1.35
USP1-204ENST00000452143 FAM104AQ969W3 186 aa6.6□□□□□ -1.35
USP1-204ENST00000452143 SMDT1Q9H4I9 107 aa6.6□□□□□ -1.35
USP1-204ENST00000452143 TGIF2-C20orf24A0A0A6YYL0 155 aa6.59□□□□□ -1.35
USP1-204ENST00000452143 FAM168BA1KXE4 195 aa6.59□□□□□ -1.35
USP1-204ENST00000452143 S100A8P05109 93 aa6.59□□□□□ -1.35
USP1-204ENST00000452143 ADIRFQ15847 76 aa6.59□□□□□ -1.35
USP1-204ENST00000452143 FAM19A5Q7Z5A7 132 aaPredicted RBP6.59□□□□□ -1.35
USP1-204ENST00000452143 C6orf48Q9UBA6 75 aa6.59□□□□□ -1.35
USP1-204ENST00000452143 TRBV30A0A0K0K1B3 111 aa6.58□□□□□ -1.36
USP1-204ENST00000452143 F8W036 122 aa6.58□□□□□ -1.36
USP1-204ENST00000452143 PPBPP02775 128 aa6.58□□□□□ -1.36
USP1-204ENST00000452143 IFI27P40305 119 aaPredicted RBP6.58□□□□□ -1.36
USP1-204ENST00000452143 C10orf25Q5T742 122 aa6.58□□□□□ -1.36
USP1-204ENST00000452143 KRTAP5-3Q6L8H2 238 aa6.58□□□□□ -1.36
USP1-204ENST00000452143 UNQ6190/PRO20217Q6UXQ8 127 aa6.58□□□□□ -1.36
USP1-204ENST00000452143 NAT8Q9UHE5 227 aa6.58□□□□□ -1.36
USP1-204ENST00000452143 D6R8Y8 96 aa6.57□□□□□ -1.36
USP1-204ENST00000452143 M0QXV9 152 aa6.57□□□□□ -1.36
USP1-204ENST00000452143 KRTAP1-4P0C5Y4 121 aa6.57□□□□□ -1.36
USP1-204ENST00000452143 RPL13AP40429 203 aaKnown RBP6.57□□□□□ -1.36
USP1-204ENST00000452143 KRTAP11-1Q8IUC1 163 aa6.57□□□□□ -1.36
USP1-204ENST00000452143 PYGO1Q9Y3Y4 419 aa6.57□□□□□ -1.36
USP1-204ENST00000452143 A0A1B0GXF2 115 aa6.56□□□□□ -1.36
USP1-204ENST00000452143 NDUFC2-KCTD14E9PQ53 114 aa6.56□□□□□ -1.36
USP1-204ENST00000452143 NPYP01303 97 aa6.56□□□□□ -1.36
USP1-204ENST00000452143 UBE2D1P51668 147 aa6.56□□□□□ -1.36
USP1-204ENST00000452143 UBE2BP63146 152 aa6.56□□□□□ -1.36
USP1-204ENST00000452143 GAGE2EQ4V326 116 aa6.56□□□□□ -1.36
USP1-204ENST00000452143 GAGE2DQ9UEU5 116 aa6.56□□□□□ -1.36
USP1-204ENST00000452143 RAB5AP20339 215 aa6.55□□□□□ -1.36
USP1-204ENST00000452143 KIAA0087Q14695 138 aa6.55□□□□□ -1.36
USP1-204ENST00000452143 LINC00242Q5T6M2 205 aa6.55□□□□□ -1.36
USP1-204ENST00000452143 MRPL54Q6P161 138 aaKnown RBP6.55□□□□□ -1.36
USP1-204ENST00000452143 KRTAP7-1Q8IUC3 87 aa6.55□□□□□ -1.36
USP1-204ENST00000452143 ORMDL3Q8N138 153 aa6.55□□□□□ -1.36
USP1-204ENST00000452143 LINC01561Q8N1V8 128 aa6.55□□□□□ -1.36
USP1-204ENST00000452143 IGLV4-3A0A075B6K6 122 aa6.54□□□□□ -1.36
USP1-204ENST00000452143 TMEM141Q96I45 108 aa6.54□□□□□ -1.36
USP1-204ENST00000452143 PACRGQ96M98 296 aaPredicted RBP6.54□□□□□ -1.36
USP1-204ENST00000452143 C9orf129Q5T035 196 aaKnown RBP6.53□□□□□ -1.36
USP1-204ENST00000452143 TEX43Q6ZNM6 134 aa6.53□□□□□ -1.36
USP1-204ENST00000452143 ATP5L2Q7Z4Y8 100 aa6.53□□□□□ -1.36
USP1-204ENST00000452143 C2orf88Q9BSF0 95 aa6.53□□□□□ -1.36
USP1-204ENST00000452143 CARHSP1Q9Y2V2 147 aaKnown RBP6.53□□□□□ -1.36
USP1-204ENST00000452143 hCG_2014768A0A024R1R8 64 aa6.52□□□□□ -1.37
USP1-204ENST00000452143 C9JQL5 133 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms