RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 I3L3M4 83 aa4.6□□□□□ -1.67
USP46-202ENST00000451218 SEC61GP60059 68 aa4.6□□□□□ -1.67
USP46-202ENST00000451218 OR4C5Q8NGB2 326 aa4.6□□□□□ -1.67
USP46-202ENST00000451218 NOP10Q9NPE3 64 aaKnown RBP4.6□□□□□ -1.67
USP46-202ENST00000451218 MRPS36P82909 103 aaKnown RBP4.6□□□□□ -1.67
USP46-202ENST00000451218 UBE2WQ96B02 151 aa4.6□□□□□ -1.67
USP46-202ENST00000451218 C16orf74Q96GX8 76 aa4.6□□□□□ -1.67
USP46-202ENST00000451218 A0A0U1RRA0 63 aa4.59□□□□□ -1.67
USP46-202ENST00000451218 PKD1P98161 4303 aa4.59□□□□□ -1.67
USP46-202ENST00000451218 FAT2Q9NYQ8 4349 aa4.59□□□□□ -1.67
USP46-202ENST00000451218 A8MZ25 164 aa4.59□□□□□ -1.67
USP46-202ENST00000451218 PLNP26678 52 aa4.59□□□□□ -1.67
USP46-202ENST00000451218 BATFQ16520 125 aa4.59□□□□□ -1.67
USP46-202ENST00000451218 PLEKHB2Q96CS7 222 aa4.59□□□□□ -1.67
USP46-202ENST00000451218 E9PLD3 99 aa4.59□□□□□ -1.68
USP46-202ENST00000451218 NPSP0C0P6 89 aa4.59□□□□□ -1.68
USP46-202ENST00000451218 DNAH11Q96DT5 4516 aa4.59□□□□□ -1.68
USP46-202ENST00000451218 TRBV25-1A0A075B6N4 114 aa4.58□□□□□ -1.68
USP46-202ENST00000451218 TMEM223A0PJW6 202 aa4.58□□□□□ -1.68
USP46-202ENST00000451218 DPM2O94777 84 aa4.58□□□□□ -1.68
USP46-202ENST00000451218 ZNF22P17026 224 aaPredicted RBP4.58□□□□□ -1.68
USP46-202ENST00000451218 SPANXCQ9NY87 97 aa4.58□□□□□ -1.68
USP46-202ENST00000451218 HIGD1BQ9P298 99 aa4.58□□□□□ -1.68
USP46-202ENST00000451218 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.58□□□□□ -1.68
USP46-202ENST00000451218 COX6A2Q02221 97 aa4.58□□□□□ -1.68
USP46-202ENST00000451218 VSIG2Q96IQ7 327 aa4.58□□□□□ -1.68
USP46-202ENST00000451218 SCGB3A1Q96QR1 104 aa4.58□□□□□ -1.68
USP46-202ENST00000451218 DNAH8Q96JB1 4490 aa4.58□□□□□ -1.68
USP46-202ENST00000451218 F5H768 121 aa4.58□□□□□ -1.68
USP46-202ENST00000451218 K7EQD1 137 aa4.58□□□□□ -1.68
USP46-202ENST00000451218 SPART-AS1P0CW21 52 aa4.58□□□□□ -1.68
USP46-202ENST00000451218 ZNF25P17030 456 aaPredicted RBP4.58□□□□□ -1.68
USP46-202ENST00000451218 UBE2BP63146 152 aa4.58□□□□□ -1.68
USP46-202ENST00000451218 TMEM141Q96I45 108 aa4.58□□□□□ -1.68
USP46-202ENST00000451218 IGHV3-38A0A0C4DH36 116 aa4.58□□□□□ -1.68
USP46-202ENST00000451218 UBE2D1P51668 147 aa4.58□□□□□ -1.68
USP46-202ENST00000451218 Q6ZUT4 128 aa4.58□□□□□ -1.68
USP46-202ENST00000451218 SERTAD4-AS1Q5TG53 156 aa4.57□□□□□ -1.68
USP46-202ENST00000451218 GTSF1LQ9H1H1 148 aa4.57□□□□□ -1.68
USP46-202ENST00000451218 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.57□□□□□ -1.68
USP46-202ENST00000451218 IGKV2-29A2NJV5 120 aaPredicted RBP4.57□□□□□ -1.68
USP46-202ENST00000451218 EMP1P54849 157 aa4.57□□□□□ -1.68
USP46-202ENST00000451218 TRBV6-4A0A1B0GX49 114 aa4.57□□□□□ -1.68
USP46-202ENST00000451218 RBM3P98179 157 aaKnown RBP4.57□□□□□ -1.68
USP46-202ENST00000451218 PMVKQ15126 192 aa4.57□□□□□ -1.68
USP46-202ENST00000451218 CYSLTR1Q9Y271 337 aa4.57□□□□□ -1.68
USP46-202ENST00000451218 CSDC2Q9Y534 153 aaKnown RBP4.57□□□□□ -1.68
USP46-202ENST00000451218 IGHV4-30-4P0DP06 118 aa4.57□□□□□ -1.68
USP46-202ENST00000451218 TRGV1A0A0A0MS02 117 aa4.56□□□□□ -1.68
USP46-202ENST00000451218 FXYD2P54710 66 aa4.56□□□□□ -1.68
USP46-202ENST00000451218 TIMM21Q9BVV7 248 aa4.56□□□□□ -1.68
USP46-202ENST00000451218 DNAH17Q9UFH2 4485 aa4.56□□□□□ -1.68
USP46-202ENST00000451218 TRBV10-1A0A0K0K1A3 114 aa4.56□□□□□ -1.68
USP46-202ENST00000451218 CRYBA4P53673 196 aa4.56□□□□□ -1.68
USP46-202ENST00000451218 RNASE13Q5GAN3 156 aaKnown RBP4.56□□□□□ -1.68
USP46-202ENST00000451218 UBE2V1Q13404 147 aa4.56□□□□□ -1.68
USP46-202ENST00000451218 ZNF706Q9Y5V0 76 aaPredicted RBP4.55□□□□□ -1.68
USP46-202ENST00000451218 Q8N3U1 123 aa4.55□□□□□ -1.68
USP46-202ENST00000451218 COL6A5A8TX70 2615 aa4.55□□□□□ -1.68
USP46-202ENST00000451218 IGHV4-28A0A0C4DH34 117 aa4.55□□□□□ -1.68
USP46-202ENST00000451218 IGLV5-39A0A0G2JS06 123 aa4.55□□□□□ -1.68
USP46-202ENST00000451218 NHLRC4P0CG21 123 aaPredicted RBP4.55□□□□□ -1.68
USP46-202ENST00000451218 C6orf226Q5I0X4 101 aa4.55□□□□□ -1.68
USP46-202ENST00000451218 RETNQ9HD89 108 aa4.55□□□□□ -1.68
USP46-202ENST00000451218 CDC42SE2Q9NRR3 84 aa4.55□□□□□ -1.68
USP46-202ENST00000451218 DNAH5Q8TE73 4624 aa4.55□□□□□ -1.68
USP46-202ENST00000451218 A0A0J9YXV3 536 aa4.55□□□□□ -1.68
USP46-202ENST00000451218 LINC00242Q5T6M2 205 aa4.55□□□□□ -1.68
USP46-202ENST00000451218 KPRPQ5T749 579 aaPredicted RBP4.55□□□□□ -1.68
USP46-202ENST00000451218 ALMS1Q8TCU4 4167 aa4.54□□□□□ -1.68
USP46-202ENST00000451218 IGLV4-60A0A075B6I1 120 aa4.54□□□□□ -1.68
USP46-202ENST00000451218 A0A0J9YY99 117 aa4.54□□□□□ -1.68
USP46-202ENST00000451218 GAGE12BA1L429 117 aa4.54□□□□□ -1.68
USP46-202ENST00000451218 GAGE7O76087 117 aa4.54□□□□□ -1.68
USP46-202ENST00000451218 GAGE12FP0CL80 117 aa4.54□□□□□ -1.68
USP46-202ENST00000451218 GAGE12GP0CL81 117 aa4.54□□□□□ -1.68
USP46-202ENST00000451218 GAGE12IP0CL82 117 aa4.54□□□□□ -1.68
USP46-202ENST00000451218 MRAPQ8TCY5 172 aa4.54□□□□□ -1.68
USP46-202ENST00000451218 G3V4G9 280 aa4.54□□□□□ -1.68
USP46-202ENST00000451218 SPTSSBQ8NFR3 76 aa4.54□□□□□ -1.68
USP46-202ENST00000451218 GAGE1Q13065 139 aa4.54□□□□□ -1.68
USP46-202ENST00000451218 TINCRA0A1B0GVN0 87 aa4.53□□□□□ -1.68
USP46-202ENST00000451218 DEFB135Q30KP9 77 aa4.53□□□□□ -1.68
USP46-202ENST00000451218 TOMM7Q9P0U1 55 aa4.53□□□□□ -1.68
USP46-202ENST00000451218 ICOSQ9Y6W8 199 aa4.53□□□□□ -1.68
USP46-202ENST00000451218 MYMXA0A1B0GTQ4 84 aa4.53□□□□□ -1.68
USP46-202ENST00000451218 ATP5G1P05496 136 aa4.53□□□□□ -1.68
USP46-202ENST00000451218 SMIM9A6NGZ8 99 aa4.53□□□□□ -1.68
USP46-202ENST00000451218 DEFB4AO15263 64 aa4.53□□□□□ -1.68
USP46-202ENST00000451218 CCL25O15444 150 aa4.53□□□□□ -1.68
USP46-202ENST00000451218 IGHV3-30P01768 117 aa4.53□□□□□ -1.68
USP46-202ENST00000451218 IGHV3-30-5P0DP03 117 aa4.53□□□□□ -1.68
USP46-202ENST00000451218 FAM222AQ5U5X8 452 aa4.53□□□□□ -1.68
USP46-202ENST00000451218 DAZ4Q86SG3 579 aaKnown RBP4.53□□□□□ -1.68
USP46-202ENST00000451218 DAZ3Q9NR90 486 aaKnown RBP4.53□□□□□ -1.68
USP46-202ENST00000451218 ADAMTSL4-AS1Q5T5F5 129 aa4.52□□□□□ -1.69
USP46-202ENST00000451218 NOTCH1P46531 2555 aa4.52□□□□□ -1.69
USP46-202ENST00000451218 TRAV8-3A0A0A6YYJ7 113 aa4.52□□□□□ -1.69
USP46-202ENST00000451218 B9D2Q9BPU9 175 aa4.52□□□□□ -1.69
USP46-202ENST00000451218 TMEM238C9JI98 176 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms