RNA–Protein interactions for RNA: ENST00000450198.6

SMARCA2-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCA2, Length 5,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-214ENST00000450198 Q8N6K4 173 aa10.55□□□□□ -0.72
SMARCA2-214ENST00000450198 TRBV27A0A0K0K1C4 114 aa10.55□□□□□ -0.72
SMARCA2-214ENST00000450198 FREM1Q5H8C1 2179 aa10.54□□□□□ -0.72
SMARCA2-214ENST00000450198 ATP5EP56381 51 aaPredicted RBP10.54□□□□□ -0.72
SMARCA2-214ENST00000450198 WFDC2Q14508 124 aa10.53□□□□□ -0.72
SMARCA2-214ENST00000450198 COA6Q5JTJ3 125 aaKnown RBP10.53□□□□□ -0.72
SMARCA2-214ENST00000450198 IGHV6-1A0A0B4J1U7 121 aa10.53□□□□□ -0.72
SMARCA2-214ENST00000450198 FAM240AA0A1B0GVK7 77 aa10.53□□□□□ -0.72
SMARCA2-214ENST00000450198 NDUFC1O43677 76 aa10.53□□□□□ -0.72
SMARCA2-214ENST00000450198 NDUFV3P56181 108 aaKnown RBP10.52□□□□□ -0.73
SMARCA2-214ENST00000450198 SDIM1Q6ZPB5 146 aa10.52□□□□□ -0.73
SMARCA2-214ENST00000450198 ADAMTS9Q9P2N4 1935 aa10.52□□□□□ -0.73
SMARCA2-214ENST00000450198 MPLKIPQ8TAP9 179 aa10.52□□□□□ -0.73
SMARCA2-214ENST00000450198 KLLNB2CW77 178 aa10.51□□□□□ -0.73
SMARCA2-214ENST00000450198 Q6Q795 121 aa10.51□□□□□ -0.73
SMARCA2-214ENST00000450198 PIEZO1Q92508 2521 aa10.5□□□□□ -0.73
SMARCA2-214ENST00000450198 A6NED7 52 aa10.5□□□□□ -0.73
SMARCA2-214ENST00000450198 NDUFC2-KCTD14E9PQ53 114 aa10.49□□□□□ -0.73
SMARCA2-214ENST00000450198 ODF3L2Q3SX64 289 aa10.49□□□□□ -0.73
SMARCA2-214ENST00000450198 TSHBP01222 138 aa10.49□□□□□ -0.73
SMARCA2-214ENST00000450198 EDN2P20800 178 aa10.49□□□□□ -0.73
SMARCA2-214ENST00000450198 Q9BRP9 147 aa10.48□□□□□ -0.73
SMARCA2-214ENST00000450198 Q6ZS46 218 aa10.48□□□□□ -0.73
SMARCA2-214ENST00000450198 MDFIQ99750 246 aa10.48□□□□□ -0.73
SMARCA2-214ENST00000450198 AVPP01185 164 aa10.48□□□□□ -0.73
SMARCA2-214ENST00000450198 COX6A2Q02221 97 aa10.48□□□□□ -0.73
SMARCA2-214ENST00000450198 PRRC2AP48634 2157 aaKnown RBP10.47□□□□□ -0.73
SMARCA2-214ENST00000450198 CDC42SE2Q9NRR3 84 aa10.47□□□□□ -0.73
SMARCA2-214ENST00000450198 FHL3Q13643 280 aa10.47□□□□□ -0.73
SMARCA2-214ENST00000450198 Q8N2B8 174 aa10.47□□□□□ -0.73
SMARCA2-214ENST00000450198 POM121L12Q8N7R1 296 aa10.47□□□□□ -0.73
SMARCA2-214ENST00000450198 NOTCH4Q99466 2003 aa10.47□□□□□ -0.73
SMARCA2-214ENST00000450198 XGP55808 180 aa10.47□□□□□ -0.73
SMARCA2-214ENST00000450198 UNQ6190/PRO20217Q6UXQ8 127 aa10.46□□□□□ -0.73
SMARCA2-214ENST00000450198 ANAPC1Q9H1A4 1944 aa10.46□□□□□ -0.73
SMARCA2-214ENST00000450198 ABCA2Q9BZC7 2435 aa10.46□□□□□ -0.74
SMARCA2-214ENST00000450198 PLA2G1BP04054 148 aaKnown RBP10.45□□□□□ -0.74
SMARCA2-214ENST00000450198 RNASE3P12724 160 aaKnown RBP10.45□□□□□ -0.74
SMARCA2-214ENST00000450198 RETNLBQ9BQ08 111 aa10.45□□□□□ -0.74
SMARCA2-214ENST00000450198 C16orf90A8MZG2 172 aa10.45□□□□□ -0.74
SMARCA2-214ENST00000450198 PRR14LQ5THK1 2151 aa10.44□□□□□ -0.74
SMARCA2-214ENST00000450198 PTH2Q96A98 100 aa10.44□□□□□ -0.74
SMARCA2-214ENST00000450198 C1orf229Q6ZS94 237 aaPredicted RBP10.43□□□□□ -0.74
SMARCA2-214ENST00000450198 WWC2-AS2Q96NR7 200 aa10.43□□□□□ -0.74
SMARCA2-214ENST00000450198 TRBV7-6A0A0J9YX20 115 aa10.43□□□□□ -0.74
SMARCA2-214ENST00000450198 NUPR1O60356 82 aa10.43□□□□□ -0.74
SMARCA2-214ENST00000450198 SMIM11BQ8TCY0 68 aa10.43□□□□□ -0.74
SMARCA2-214ENST00000450198 UQCRQO14949 82 aa10.43□□□□□ -0.74
SMARCA2-214ENST00000450198 TRIAP1O43715 76 aa10.43□□□□□ -0.74
SMARCA2-214ENST00000450198 SPINK1P00995 79 aa10.43□□□□□ -0.74
SMARCA2-214ENST00000450198 NCOA6Q14686 2063 aaPredicted RBP10.42□□□□□ -0.74
SMARCA2-214ENST00000450198 GOLGB1Q14789 3259 aaKnown RBP10.41□□□□□ -0.74
SMARCA2-214ENST00000450198 LYPD5Q6UWN5 251 aa10.41□□□□□ -0.74
SMARCA2-214ENST00000450198 FAM30AQ9NZY2 134 aa10.4□□□□□ -0.74
SMARCA2-214ENST00000450198 TRBV10-3A0A0K0K1G6 114 aa10.4□□□□□ -0.74
SMARCA2-214ENST00000450198 PRR4Q16378 134 aa10.39□□□□□ -0.75
SMARCA2-214ENST00000450198 ZNF580Q9UK33 172 aa10.39□□□□□ -0.75
SMARCA2-214ENST00000450198 FHL2Q14192 279 aa10.39□□□□□ -0.75
SMARCA2-214ENST00000450198 ZNF295-AS1Q8N0V1 137 aa10.39□□□□□ -0.75
SMARCA2-214ENST00000450198 A8MZ25 164 aa10.38□□□□□ -0.75
SMARCA2-214ENST00000450198 PRM2P04554 102 aa10.38□□□□□ -0.75
SMARCA2-214ENST00000450198 NTM-AS1Q6ZSK4 140 aa10.38□□□□□ -0.75
SMARCA2-214ENST00000450198 OBSL1O75147 1896 aa10.38□□□□□ -0.75
SMARCA2-214ENST00000450198 hDV103S1A0JD37 113 aa10.37□□□□□ -0.75
SMARCA2-214ENST00000450198 CDSNQ15517 529 aa10.37□□□□□ -0.75
SMARCA2-214ENST00000450198 LINC00208Q96KT6 92 aa10.37□□□□□ -0.75
SMARCA2-214ENST00000450198 POLR2KP53803 58 aaKnown RBP10.37□□□□□ -0.75
SMARCA2-214ENST00000450198 C9orf116Q5BN46 136 aaPredicted RBP10.37□□□□□ -0.75
SMARCA2-214ENST00000450198 BRWD1-AS2P59051 145 aa10.37□□□□□ -0.75
SMARCA2-214ENST00000450198 DSCAML1Q8TD84 2053 aa10.37□□□□□ -0.75
SMARCA2-214ENST00000450198 CRIP1P50238 77 aa10.36□□□□□ -0.75
SMARCA2-214ENST00000450198 CRIP2P52943 208 aaPredicted RBP10.36□□□□□ -0.75
SMARCA2-214ENST00000450198 SPACA4Q8TDM5 124 aa10.35□□□□□ -0.75
SMARCA2-214ENST00000450198 KIF26AQ9ULI4 1882 aaPredicted RBP10.35□□□□□ -0.75
SMARCA2-214ENST00000450198 PRR9Q5T870 116 aa10.35□□□□□ -0.75
SMARCA2-214ENST00000450198 COX6B2Q6YFQ2 88 aa10.34□□□□□ -0.75
SMARCA2-214ENST00000450198 TP73-AS1Q9UF72 201 aa10.34□□□□□ -0.75
SMARCA2-214ENST00000450198 RNASE8Q8TDE3 154 aaKnown RBP10.34□□□□□ -0.75
SMARCA2-214ENST00000450198 A0A087WSZ3 146 aa10.33□□□□□ -0.76
SMARCA2-214ENST00000450198 EIF4EBP1Q13541 118 aaPredicted RBP10.33□□□□□ -0.76
SMARCA2-214ENST00000450198 LINC01547P58512 204 aaPredicted RBP10.33□□□□□ -0.76
SMARCA2-214ENST00000450198 SNURFQ9Y675 71 aa10.33□□□□□ -0.76
SMARCA2-214ENST00000450198 CRYGAP11844 174 aa10.32□□□□□ -0.76
SMARCA2-214ENST00000450198 C11orf1Q9H5F2 150 aa10.32□□□□□ -0.76
SMARCA2-214ENST00000450198 NCOR2Q9Y618 2525 aa10.32□□□□□ -0.76
SMARCA2-214ENST00000450198 A0A1B0GUV1 79 aa10.32□□□□□ -0.76
SMARCA2-214ENST00000450198 LINC00242Q5T6M2 205 aa10.32□□□□□ -0.76
SMARCA2-214ENST00000450198 NRACQ8N912 160 aa10.32□□□□□ -0.76
SMARCA2-214ENST00000450198 CELA1Q9UNI1 258 aa10.31□□□□□ -0.76
SMARCA2-214ENST00000450198 IGKV2D-30A0A075B6S6 120 aa10.31□□□□□ -0.76
SMARCA2-214ENST00000450198 IGKV2-30P06310 120 aa10.31□□□□□ -0.76
SMARCA2-214ENST00000450198 LINC01561Q8N1V8 128 aa10.3□□□□□ -0.76
SMARCA2-214ENST00000450198 Q8N814 137 aa10.29□□□□□ -0.76
SMARCA2-214ENST00000450198 SMCR5Q8TEV8 140 aa10.29□□□□□ -0.76
SMARCA2-214ENST00000450198 IGLV4-60A0A075B6I1 120 aa10.28□□□□□ -0.76
SMARCA2-214ENST00000450198 Q6ZRP5 223 aa10.28□□□□□ -0.76
SMARCA2-214ENST00000450198 SBSPONQ8IVN8 264 aa10.28□□□□□ -0.76
SMARCA2-214ENST00000450198 TYMSOSQ8TAI1 123 aa10.28□□□□□ -0.76
SMARCA2-214ENST00000450198 IMUPQ9GZP8 106 aa10.28□□□□□ -0.76
SMARCA2-214ENST00000450198 MED12LQ86YW9 2145 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms