RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 C22orf24Q9Y442 160 aa4.29□□□□□ -1.72
LINC01961-201ENST00000449954 V9GYH0 126 aa4.29□□□□□ -1.72
LINC01961-201ENST00000449954 TRBV30A0A0K0K1B3 111 aa4.28□□□□□ -1.72
LINC01961-201ENST00000449954 A4D1N5 150 aa4.28□□□□□ -1.72
LINC01961-201ENST00000449954 SPINK1P00995 79 aa4.28□□□□□ -1.72
LINC01961-201ENST00000449954 UBE2AP49459 152 aa4.28□□□□□ -1.72
LINC01961-201ENST00000449954 UNQ6190/PRO20217Q6UXQ8 127 aa4.28□□□□□ -1.72
LINC01961-201ENST00000449954 KRTAP13-1Q8IUC0 172 aa4.28□□□□□ -1.72
LINC01961-201ENST00000449954 C3orf22Q8N5N4 141 aa4.28□□□□□ -1.72
LINC01961-201ENST00000449954 PACRGQ96M98 296 aaPredicted RBP4.28□□□□□ -1.72
LINC01961-201ENST00000449954 CYTL1Q9NRR1 136 aa4.28□□□□□ -1.72
LINC01961-201ENST00000449954 XKRY2A2RUG3 117 aa4.27□□□□□ -1.73
LINC01961-201ENST00000449954 CENPXA8MT69 81 aa4.27□□□□□ -1.73
LINC01961-201ENST00000449954 TAGLN2P37802 199 aaKnown RBP4.27□□□□□ -1.73
LINC01961-201ENST00000449954 MRPL55Q7Z7F7 128 aaKnown RBP4.27□□□□□ -1.73
LINC01961-201ENST00000449954 TCEAL7Q9BRU2 100 aa4.27□□□□□ -1.73
LINC01961-201ENST00000449954 HSPB11Q9Y547 144 aa4.27□□□□□ -1.73
LINC01961-201ENST00000449954 SDHAF1A6NFY7 115 aa4.26□□□□□ -1.73
LINC01961-201ENST00000449954 MBP02144 154 aa4.26□□□□□ -1.73
LINC01961-201ENST00000449954 BTCP35070 178 aa4.26□□□□□ -1.73
LINC01961-201ENST00000449954 TPPP3Q9BW30 176 aa4.26□□□□□ -1.73
LINC01961-201ENST00000449954 TRAV13-1A0A0B4J241 112 aa4.25□□□□□ -1.73
LINC01961-201ENST00000449954 FAM74A7A6NL05 159 aa4.25□□□□□ -1.73
LINC01961-201ENST00000449954 I3L3M4 83 aa4.25□□□□□ -1.73
LINC01961-201ENST00000449954 UBE2G2P60604 165 aa4.25□□□□□ -1.73
LINC01961-201ENST00000449954 SMAGPQ0VAQ4 97 aa4.25□□□□□ -1.73
LINC01961-201ENST00000449954 TRIQKQ629K1 86 aa4.25□□□□□ -1.73
LINC01961-201ENST00000449954 SEC22CQ9BRL7 303 aa4.25□□□□□ -1.73
LINC01961-201ENST00000449954 SMIM3Q9BZL3 60 aa4.25□□□□□ -1.73
LINC01961-201ENST00000449954 IGLC6P0CF74 106 aa4.24□□□□□ -1.73
LINC01961-201ENST00000449954 AKR1C3P42330 323 aa4.24□□□□□ -1.73
LINC01961-201ENST00000449954 RPS29P62273 56 aaKnown RBP4.24□□□□□ -1.73
LINC01961-201ENST00000449954 GATD1Q8NB37 220 aa4.24□□□□□ -1.73
LINC01961-201ENST00000449954 ACTR3CQ9C0K3 210 aaPredicted RBP4.24□□□□□ -1.73
LINC01961-201ENST00000449954 CSDC2Q9Y534 153 aaKnown RBP4.24□□□□□ -1.73
LINC01961-201ENST00000449954 C7orf77A4D0Y5 90 aa4.23□□□□□ -1.73
LINC01961-201ENST00000449954 F2Z2F3 143 aa4.23□□□□□ -1.73
LINC01961-201ENST00000449954 PET100P0DJ07 73 aa4.23□□□□□ -1.73
LINC01961-201ENST00000449954 PMCHP20382 165 aa4.23□□□□□ -1.73
LINC01961-201ENST00000449954 KRTAP10-7P60409 375 aaPredicted RBP4.23□□□□□ -1.73
LINC01961-201ENST00000449954 KRTAP19-6Q3LI70 58 aa4.23□□□□□ -1.73
LINC01961-201ENST00000449954 TEX261Q6UWH6 196 aa4.23□□□□□ -1.73
LINC01961-201ENST00000449954 PSMG3Q9BT73 122 aaPredicted RBP4.23□□□□□ -1.73
LINC01961-201ENST00000449954 RPS20P60866 119 aaKnown RBP4.22□□□□□ -1.73
LINC01961-201ENST00000449954 SERF2P84101 59 aa4.22□□□□□ -1.73
LINC01961-201ENST00000449954 LYZL1Q6UWQ5 148 aa4.22□□□□□ -1.73
LINC01961-201ENST00000449954 Q8N377 158 aa4.22□□□□□ -1.73
LINC01961-201ENST00000449954 Q8NBF4 154 aa4.22□□□□□ -1.73
LINC01961-201ENST00000449954 STOML3Q8TAV4 291 aa4.22□□□□□ -1.73
LINC01961-201ENST00000449954 RPL39LQ96EH5 51 aaKnown RBP4.22□□□□□ -1.73
LINC01961-201ENST00000449954 IGHV3OR16-9A0A0B4J2B5 98 aa4.21□□□□□ -1.74
LINC01961-201ENST00000449954 RAB19A4D1S5 217 aa4.21□□□□□ -1.74
LINC01961-201ENST00000449954 ZNF727A8MUV8 499 aa4.21□□□□□ -1.74
LINC01961-201ENST00000449954 HSBP1L1C9JCN9 74 aa4.21□□□□□ -1.74
LINC01961-201ENST00000449954 SLC25A20O43772 301 aa4.21□□□□□ -1.74
LINC01961-201ENST00000449954 ATP6V0CP27449 155 aa4.21□□□□□ -1.74
LINC01961-201ENST00000449954 FHITP49789 147 aa4.21□□□□□ -1.74
LINC01961-201ENST00000449954 PET117Q6UWS5 81 aa4.21□□□□□ -1.74
LINC01961-201ENST00000449954 MARVELD1Q9BSK0 173 aa4.21□□□□□ -1.74
LINC01961-201ENST00000449954 NUDT15Q9NV35 164 aa4.21□□□□□ -1.74
LINC01961-201ENST00000449954 TMEM242Q9NWH2 141 aa4.21□□□□□ -1.74
LINC01961-201ENST00000449954 TNFSF18Q9UNG2 199 aa4.21□□□□□ -1.74
LINC01961-201ENST00000449954 TRBV6-5A0A0K0K1A5 114 aa4.2□□□□□ -1.74
LINC01961-201ENST00000449954 CCDC160A6NGH7 325 aa4.2□□□□□ -1.74
LINC01961-201ENST00000449954 RPL37AP8A6NKH3 93 aa4.2□□□□□ -1.74
LINC01961-201ENST00000449954 UPK1BO75841 260 aa4.2□□□□□ -1.74
LINC01961-201ENST00000449954 ATP6V1G2O95670 118 aa4.2□□□□□ -1.74
LINC01961-201ENST00000449954 FOXA3P55318 350 aaPredicted RBP4.2□□□□□ -1.74
LINC01961-201ENST00000449954 KIAA0087Q14695 138 aa4.2□□□□□ -1.74
LINC01961-201ENST00000449954 RNASE13Q5GAN3 156 aaKnown RBP4.2□□□□□ -1.74
LINC01961-201ENST00000449954 BAGE2Q86Y30 109 aa4.2□□□□□ -1.74
LINC01961-201ENST00000449954 PLEKHB2Q96CS7 222 aa4.2□□□□□ -1.74
LINC01961-201ENST00000449954 LINC00167Q96N53 147 aa4.2□□□□□ -1.74
LINC01961-201ENST00000449954 CCDC32Q9BV29 185 aa4.2□□□□□ -1.74
LINC01961-201ENST00000449954 GNB1LQ9BYB4 327 aa4.2□□□□□ -1.74
LINC01961-201ENST00000449954 CTXND1A0A1B0GTU2 59 aa4.19□□□□□ -1.74
LINC01961-201ENST00000449954 INMT-MINDY4F8WBC2 141 aa4.19□□□□□ -1.74
LINC01961-201ENST00000449954 PRLHP81277 87 aa4.19□□□□□ -1.74
LINC01961-201ENST00000449954 PNRC1Q12796 327 aaPredicted RBP4.19□□□□□ -1.74
LINC01961-201ENST00000449954 PPP1R1CQ8WVI7 109 aa4.19□□□□□ -1.74
LINC01961-201ENST00000449954 XAGE1AQ9HD64 81 aa4.19□□□□□ -1.74
LINC01961-201ENST00000449954 C2orf82Q6UX34 121 aa4.18□□□□□ -1.74
LINC01961-201ENST00000449954 Q6ZUT4 128 aa4.18□□□□□ -1.74
LINC01961-201ENST00000449954 CNFNQ9BYD5 112 aa4.18□□□□□ -1.74
LINC01961-201ENST00000449954 RNASE7Q9H1E1 156 aaKnown RBP4.18□□□□□ -1.74
LINC01961-201ENST00000449954 TGIF2-C20orf24A0A0A6YYL0 155 aa4.17□□□□□ -1.74
LINC01961-201ENST00000449954 TRBV27A0A0K0K1C4 114 aa4.17□□□□□ -1.74
LINC01961-201ENST00000449954 SIX6O95475 246 aa4.17□□□□□ -1.74
LINC01961-201ENST00000449954 IFNA1P01562 189 aa4.17□□□□□ -1.74
LINC01961-201ENST00000449954 CST9LP1Q5W188 147 aa4.17□□□□□ -1.74
LINC01961-201ENST00000449954 SMIM15Q7Z3B0 74 aa4.17□□□□□ -1.74
LINC01961-201ENST00000449954 ST20Q9HBF5 79 aa4.17□□□□□ -1.74
LINC01961-201ENST00000449954 ZNF706Q9Y5V0 76 aaPredicted RBP4.17□□□□□ -1.74
LINC01961-201ENST00000449954 GAGE10A6NGK3 116 aa4.16□□□□□ -1.74
LINC01961-201ENST00000449954 IFITM10A6NMD0 228 aa4.16□□□□□ -1.74
LINC01961-201ENST00000449954 MPC2O95563 127 aa4.16□□□□□ -1.74
LINC01961-201ENST00000449954 ZNF726P1Q15940 193 aa4.16□□□□□ -1.74
LINC01961-201ENST00000449954 URB1-AS1Q96HZ7 61 aa4.16□□□□□ -1.74
LINC01961-201ENST00000449954 TIMM21Q9BVV7 248 aa4.16□□□□□ -1.74
LINC01961-201ENST00000449954 GEMIN7Q9H840 131 aaKnown RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms