RNA–Protein interactions for RNA: ENST00000449159.5

SMPD4-211, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 635 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-211ENST00000449159 UBE2D1P51668 147 aa6.93□□□□□ -1.3
SMPD4-211ENST00000449159 KRTAP10-1P60331 282 aa6.93□□□□□ -1.3
SMPD4-211ENST00000449159 LINC01620Q4KN68 170 aa6.93□□□□□ -1.3
SMPD4-211ENST00000449159 HIGD2BQ4VC39 106 aa6.93□□□□□ -1.3
SMPD4-211ENST00000449159 C14orf177Q52M58 125 aa6.93□□□□□ -1.3
SMPD4-211ENST00000449159 PDZD11Q5EBL8 140 aa6.93□□□□□ -1.3
SMPD4-211ENST00000449159 LINC00242Q5T6M2 205 aa6.93□□□□□ -1.3
SMPD4-211ENST00000449159 C5orf38Q86SI9 138 aa6.93□□□□□ -1.3
SMPD4-211ENST00000449159 CHCHD1Q96BP2 118 aaKnown RBP6.93□□□□□ -1.3
SMPD4-211ENST00000449159 C2orf88Q9BSF0 95 aa6.93□□□□□ -1.3
SMPD4-211ENST00000449159 HERC1Q15751 4861 aa6.92□□□□□ -1.3
SMPD4-211ENST00000449159 IGHV3OR16-9A0A0B4J2B5 98 aa6.92□□□□□ -1.3
SMPD4-211ENST00000449159 HIST1H2BKO60814 126 aa6.92□□□□□ -1.3
SMPD4-211ENST00000449159 SERF1AO75920 110 aa6.92□□□□□ -1.3
SMPD4-211ENST00000449159 HIST1H2BJP06899 126 aa6.92□□□□□ -1.3
SMPD4-211ENST00000449159 HIST1H2BOP23527 126 aa6.92□□□□□ -1.3
SMPD4-211ENST00000449159 HIST1H2BBP33778 126 aa6.92□□□□□ -1.3
SMPD4-211ENST00000449159 HIST1H2BDP58876 126 aa6.92□□□□□ -1.3
SMPD4-211ENST00000449159 HIST1H2BCP62807 126 aa6.92□□□□□ -1.3
SMPD4-211ENST00000449159 COX6A2Q02221 97 aa6.92□□□□□ -1.3
SMPD4-211ENST00000449159 HIST2H2BEQ16778 126 aa6.92□□□□□ -1.3
SMPD4-211ENST00000449159 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.92□□□□□ -1.3
SMPD4-211ENST00000449159 Q8N1X5 172 aa6.92□□□□□ -1.3
SMPD4-211ENST00000449159 HIST1H2BHQ93079 126 aa6.92□□□□□ -1.3
SMPD4-211ENST00000449159 LINC00526Q96FQ7 95 aa6.92□□□□□ -1.3
SMPD4-211ENST00000449159 HIST1H2BNQ99877 126 aa6.92□□□□□ -1.3
SMPD4-211ENST00000449159 HIST1H2BMQ99879 126 aa6.92□□□□□ -1.3
SMPD4-211ENST00000449159 GVQW2A0A096LPI5 108 aaPredicted RBP6.91□□□□□ -1.3
SMPD4-211ENST00000449159 LINC01549A6NIU2 74 aa6.91□□□□□ -1.3
SMPD4-211ENST00000449159 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.91□□□□□ -1.3
SMPD4-211ENST00000449159 COX7A2LO14548 114 aa6.91□□□□□ -1.3
SMPD4-211ENST00000449159 NUPR1O60356 82 aa6.91□□□□□ -1.3
SMPD4-211ENST00000449159 SLPIP03973 132 aa6.91□□□□□ -1.3
SMPD4-211ENST00000449159 GCSHP23434 173 aa6.91□□□□□ -1.3
SMPD4-211ENST00000449159 PAPPA-AS1Q5QFB9 102 aa6.91□□□□□ -1.3
SMPD4-211ENST00000449159 FAM19A2Q8N3H0 131 aa6.91□□□□□ -1.3
SMPD4-211ENST00000449159 DMBT1Q9UGM3 2413 aaPredicted RBP6.91□□□□□ -1.3
SMPD4-211ENST00000449159 IGHV1-58A0A0C4DH39 117 aa6.9□□□□□ -1.3
SMPD4-211ENST00000449159 HSBP1O75506 76 aa6.9□□□□□ -1.3
SMPD4-211ENST00000449159 MALP21145 153 aa6.9□□□□□ -1.3
SMPD4-211ENST00000449159 CFAP161Q6P656 301 aa6.9□□□□□ -1.3
SMPD4-211ENST00000449159 CST9LQ9H4G1 147 aa6.9□□□□□ -1.3
SMPD4-211ENST00000449159 A0A0J9YXV3 536 aa6.89□□□□□ -1.31
SMPD4-211ENST00000449159 FAM19A3Q7Z5A8 133 aa6.89□□□□□ -1.31
SMPD4-211ENST00000449159 A0A087WZ39 114 aa6.88□□□□□ -1.31
SMPD4-211ENST00000449159 NDUFA6P56556 154 aa6.88□□□□□ -1.31
SMPD4-211ENST00000449159 CNBPP62633 177 aaKnown RBP6.88□□□□□ -1.31
SMPD4-211ENST00000449159 PMVKQ15126 192 aa6.88□□□□□ -1.31
SMPD4-211ENST00000449159 CDKN2A-AS1Q9UH64 79 aa6.88□□□□□ -1.31
SMPD4-211ENST00000449159 IGHV3-64A0A075B6Q5 118 aa6.87□□□□□ -1.31
SMPD4-211ENST00000449159 ATP5LO75964 103 aa6.87□□□□□ -1.31
SMPD4-211ENST00000449159 ORAOV1Q8WV07 137 aa6.87□□□□□ -1.31
SMPD4-211ENST00000449159 FAT1Q14517 4588 aa6.87□□□□□ -1.31
SMPD4-211ENST00000449159 IGLV4-69A0A075B6H9 119 aa6.86□□□□□ -1.31
SMPD4-211ENST00000449159 TINCRA0A1B0GVN0 87 aa6.86□□□□□ -1.31
SMPD4-211ENST00000449159 ZNF561-AS1K7EIQ3 104 aa6.86□□□□□ -1.31
SMPD4-211ENST00000449159 HERVK_113P63121 156 aa6.86□□□□□ -1.31
SMPD4-211ENST00000449159 HAMPP81172 84 aa6.86□□□□□ -1.31
SMPD4-211ENST00000449159 SPAG11BQ08648 103 aa6.86□□□□□ -1.31
SMPD4-211ENST00000449159 C9orf163Q8N9P6 203 aa6.86□□□□□ -1.31
SMPD4-211ENST00000449159 IFI27L1Q96BM0 104 aa6.86□□□□□ -1.31
SMPD4-211ENST00000449159 GEMIN7Q9H840 131 aaKnown RBP6.86□□□□□ -1.31
SMPD4-211ENST00000449159 FAM30AQ9NZY2 134 aa6.86□□□□□ -1.31
SMPD4-211ENST00000449159 APOMO95445 188 aa6.85□□□□□ -1.31
SMPD4-211ENST00000449159 IGLC3P0DOY3 106 aa6.85□□□□□ -1.31
SMPD4-211ENST00000449159 SEC11AP67812 179 aa6.85□□□□□ -1.31
SMPD4-211ENST00000449159 LINC00469Q8N7U9 141 aa6.85□□□□□ -1.31
SMPD4-211ENST00000449159 OR10D4PQ8NGN7 298 aa6.85□□□□□ -1.31
SMPD4-211ENST00000449159 IGLV5-45A0A087WSX0 123 aa6.84□□□□□ -1.31
SMPD4-211ENST00000449159 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.84□□□□□ -1.31
SMPD4-211ENST00000449159 LEPROTL1O95214 131 aa6.84□□□□□ -1.31
SMPD4-211ENST00000449159 FABP4P15090 132 aa6.84□□□□□ -1.31
SMPD4-211ENST00000449159 Q6ZSA8 131 aa6.84□□□□□ -1.31
SMPD4-211ENST00000449159 CARD19Q96LW7 228 aa6.84□□□□□ -1.31
SMPD4-211ENST00000449159 CHAC1Q9BUX1 264 aa6.84□□□□□ -1.31
SMPD4-211ENST00000449159 C11orf86A6NJI1 115 aa6.83□□□□□ -1.32
SMPD4-211ENST00000449159 H0Y8G0 127 aa6.83□□□□□ -1.32
SMPD4-211ENST00000449159 PANO1I0J062 215 aa6.83□□□□□ -1.32
SMPD4-211ENST00000449159 XGP55808 180 aa6.83□□□□□ -1.32
SMPD4-211ENST00000449159 SYCNQ0VAF6 134 aa6.83□□□□□ -1.32
SMPD4-211ENST00000449159 KIAA0087Q14695 138 aa6.83□□□□□ -1.32
SMPD4-211ENST00000449159 SDIM1Q6ZPB5 146 aa6.83□□□□□ -1.32
SMPD4-211ENST00000449159 Q6ZRU5 148 aa6.83□□□□□ -1.32
SMPD4-211ENST00000449159 LINC01561Q8N1V8 128 aa6.83□□□□□ -1.32
SMPD4-211ENST00000449159 CAMK2N2Q96S95 79 aa6.83□□□□□ -1.32
SMPD4-211ENST00000449159 CHTOPQ9Y3Y2 248 aaKnown RBP6.83□□□□□ -1.32
SMPD4-211ENST00000449159 VPS13BQ7Z7G8 4022 aa6.83□□□□□ -1.32
SMPD4-211ENST00000449159 TRAV12-1A0A0B4J245 112 aa6.82□□□□□ -1.32
SMPD4-211ENST00000449159 SMIM1B2RUZ4 78 aa6.82□□□□□ -1.32
SMPD4-211ENST00000449159 EPM2AB3EWF7 344 aa6.82□□□□□ -1.32
SMPD4-211ENST00000449159 SPINK8P0C7L1 97 aa6.82□□□□□ -1.32
SMPD4-211ENST00000449159 ZNF22P17026 224 aaPredicted RBP6.82□□□□□ -1.32
SMPD4-211ENST00000449159 COA6Q5JTJ3 125 aaKnown RBP6.82□□□□□ -1.32
SMPD4-211ENST00000449159 C10orf25Q5T742 122 aa6.82□□□□□ -1.32
SMPD4-211ENST00000449159 C2orf82Q6UX34 121 aa6.82□□□□□ -1.32
SMPD4-211ENST00000449159 C2orf48Q96LS8 159 aa6.82□□□□□ -1.32
SMPD4-211ENST00000449159 PACRGQ96M98 296 aaPredicted RBP6.82□□□□□ -1.32
SMPD4-211ENST00000449159 MRPL35Q9NZE8 188 aaKnown RBP6.82□□□□□ -1.32
SMPD4-211ENST00000449159 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.82□□□□□ -1.32
SMPD4-211ENST00000449159 CHTF8P0CG12 524 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms