RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 C6orf48Q9UBA6 75 aa10.76□□□□□ -0.69
CHCHD3-203ENST00000448878 TLX1NBP0CAT3 122 aa10.75□□□□□ -0.69
CHCHD3-203ENST00000448878 SLC51BQ86UW2 128 aa10.75□□□□□ -0.69
CHCHD3-203ENST00000448878 TIMM21Q9BVV7 248 aa10.75□□□□□ -0.69
CHCHD3-203ENST00000448878 RIGQ13278 110 aa10.74□□□□□ -0.69
CHCHD3-203ENST00000448878 SMDT1Q9H4I9 107 aa10.74□□□□□ -0.69
CHCHD3-203ENST00000448878 PPP1R2P9O14990 202 aa10.73□□□□□ -0.69
CHCHD3-203ENST00000448878 RPL39P62891 51 aaKnown RBP10.73□□□□□ -0.69
CHCHD3-203ENST00000448878 NRACQ8N912 160 aa10.73□□□□□ -0.69
CHCHD3-203ENST00000448878 CARHSP1Q9Y2V2 147 aaKnown RBP10.73□□□□□ -0.69
CHCHD3-203ENST00000448878 IGHV3OR16-9A0A0B4J2B5 98 aa10.72□□□□□ -0.69
CHCHD3-203ENST00000448878 KRTAP9-6A0A140TA67 174 aa10.72□□□□□ -0.69
CHCHD3-203ENST00000448878 TMEM250H0YL14 139 aa10.72□□□□□ -0.69
CHCHD3-203ENST00000448878 KRTAP7-1Q8IUC3 87 aa10.72□□□□□ -0.69
CHCHD3-203ENST00000448878 IFITM10A6NMD0 228 aa10.71□□□□□ -0.69
CHCHD3-203ENST00000448878 TGIF2-C20orf24A0A0A6YYL0 155 aa10.7□□□□□ -0.7
CHCHD3-203ENST00000448878 ZNF861PO60384 105 aa10.69□□□□□ -0.7
CHCHD3-203ENST00000448878 HBBP68871 147 aa10.69□□□□□ -0.7
CHCHD3-203ENST00000448878 PACRGQ96M98 296 aaPredicted RBP10.69□□□□□ -0.7
CHCHD3-203ENST00000448878 SMIM7Q9BQ49 75 aa10.69□□□□□ -0.7
CHCHD3-203ENST00000448878 MRPL51Q4U2R6 128 aaKnown RBP10.68□□□□□ -0.7
CHCHD3-203ENST00000448878 LCE2AQ5TA79 106 aaPredicted RBP10.68□□□□□ -0.7
CHCHD3-203ENST00000448878 C2orf82Q6UX34 121 aa10.68□□□□□ -0.7
CHCHD3-203ENST00000448878 CKS2P33552 79 aa10.67□□□□□ -0.7
CHCHD3-203ENST00000448878 C9orf129Q5T035 196 aaKnown RBP10.67□□□□□ -0.7
CHCHD3-203ENST00000448878 LINC01551Q86U37 167 aa10.67□□□□□ -0.7
CHCHD3-203ENST00000448878 OSTCQ9NRP0 149 aa10.67□□□□□ -0.7
CHCHD3-203ENST00000448878 SPANXA1Q9NS26 97 aa10.67□□□□□ -0.7
CHCHD3-203ENST00000448878 TRBV30A0A0K0K1B3 111 aa10.66□□□□□ -0.7
CHCHD3-203ENST00000448878 NDUFC2-KCTD14E9PQ53 114 aa10.66□□□□□ -0.7
CHCHD3-203ENST00000448878 TCAPO15273 167 aa10.66□□□□□ -0.7
CHCHD3-203ENST00000448878 C20orf78Q9BR46 151 aa10.66□□□□□ -0.7
CHCHD3-203ENST00000448878 ZNF727A8MUV8 499 aa10.65□□□□□ -0.7
CHCHD3-203ENST00000448878 MRPS36P82909 103 aaKnown RBP10.65□□□□□ -0.7
CHCHD3-203ENST00000448878 KIAA0087Q14695 138 aa10.65□□□□□ -0.7
CHCHD3-203ENST00000448878 FAM104BQ5XKR9 115 aa10.65□□□□□ -0.7
CHCHD3-203ENST00000448878 TYMSOSQ8TAI1 123 aa10.65□□□□□ -0.7
CHCHD3-203ENST00000448878 FAM104AQ969W3 186 aa10.65□□□□□ -0.7
CHCHD3-203ENST00000448878 EIF5A2Q9GZV4 153 aaKnown RBP10.65□□□□□ -0.7
CHCHD3-203ENST00000448878 LINC00862A6NCI5 91 aa10.64□□□□□ -0.71
CHCHD3-203ENST00000448878 BLOC1S1P78537 153 aa10.64□□□□□ -0.71
CHCHD3-203ENST00000448878 LINC00469Q8N7U9 141 aa10.64□□□□□ -0.71
CHCHD3-203ENST00000448878 CTDSP1Q9GZU7 261 aa10.64□□□□□ -0.71
CHCHD3-203ENST00000448878 NUPR1O60356 82 aa10.63□□□□□ -0.71
CHCHD3-203ENST00000448878 TNFRSF6BO95407 300 aa10.63□□□□□ -0.71
CHCHD3-203ENST00000448878 RAB14P61106 215 aa10.63□□□□□ -0.71
CHCHD3-203ENST00000448878 IFITM2Q01629 132 aa10.63□□□□□ -0.71
CHCHD3-203ENST00000448878 NAT8BQ9UHF3 227 aa10.63□□□□□ -0.71
CHCHD3-203ENST00000448878 V9GYV3 84 aa10.63□□□□□ -0.71
CHCHD3-203ENST00000448878 A0A087X002 238 aa10.62□□□□□ -0.71
CHCHD3-203ENST00000448878 CRYGAP11844 174 aa10.62□□□□□ -0.71
CHCHD3-203ENST00000448878 ALKAL2Q6UX46 152 aa10.62□□□□□ -0.71
CHCHD3-203ENST00000448878 SMIM2Q9BVW6 85 aa10.62□□□□□ -0.71
CHCHD3-203ENST00000448878 C22orf24Q9Y442 160 aa10.62□□□□□ -0.71
CHCHD3-203ENST00000448878 TRBV24-1A0A075B6N3 115 aa10.61□□□□□ -0.71
CHCHD3-203ENST00000448878 PRSS2P07478 247 aa10.61□□□□□ -0.71
CHCHD3-203ENST00000448878 IFI27P40305 119 aaPredicted RBP10.61□□□□□ -0.71
CHCHD3-203ENST00000448878 LBHQ53QV2 105 aaPredicted RBP10.61□□□□□ -0.71
CHCHD3-203ENST00000448878 RETNLBQ9BQ08 111 aa10.61□□□□□ -0.71
CHCHD3-203ENST00000448878 TOMM7Q9P0U1 55 aa10.61□□□□□ -0.71
CHCHD3-203ENST00000448878 RPL32P62910 135 aaKnown RBP10.6□□□□□ -0.71
CHCHD3-203ENST00000448878 LINC00242Q5T6M2 205 aa10.6□□□□□ -0.71
CHCHD3-203ENST00000448878 D6R8Y8 96 aa10.59□□□□□ -0.71
CHCHD3-203ENST00000448878 RAB5AP20339 215 aa10.59□□□□□ -0.71
CHCHD3-203ENST00000448878 RPL28P46779 137 aaKnown RBP10.59□□□□□ -0.71
CHCHD3-203ENST00000448878 CKS1BP61024 79 aa10.59□□□□□ -0.71
CHCHD3-203ENST00000448878 CDIP1Q9H305 208 aa10.59□□□□□ -0.71
CHCHD3-203ENST00000448878 XAGE1AQ9HD64 81 aa10.59□□□□□ -0.71
CHCHD3-203ENST00000448878 NPYP01303 97 aa10.57□□□□□ -0.72
CHCHD3-203ENST00000448878 FAM74A3Q4VXF1 159 aa10.57□□□□□ -0.72
CHCHD3-203ENST00000448878 C6orf226Q5I0X4 101 aa10.57□□□□□ -0.72
CHCHD3-203ENST00000448878 ANAPC11Q9NYG5 84 aa10.57□□□□□ -0.72
CHCHD3-203ENST00000448878 FAT4Q6V0I7 4981 aa10.57□□□□□ -0.72
CHCHD3-203ENST00000448878 TMEM141Q96I45 108 aa10.56□□□□□ -0.72
CHCHD3-203ENST00000448878 IGLV4-3A0A075B6K6 122 aa10.55□□□□□ -0.72
CHCHD3-203ENST00000448878 SRP19P09132 144 aaKnown RBP10.55□□□□□ -0.72
CHCHD3-203ENST00000448878 TEX43Q6ZNM6 134 aa10.55□□□□□ -0.72
CHCHD3-203ENST00000448878 A0A1B0GW15 77 aa10.54□□□□□ -0.72
CHCHD3-203ENST00000448878 F8W036 122 aa10.54□□□□□ -0.72
CHCHD3-203ENST00000448878 BCE1O60756 84 aa10.54□□□□□ -0.72
CHCHD3-203ENST00000448878 ADIRFQ15847 76 aa10.54□□□□□ -0.72
CHCHD3-203ENST00000448878 CLLU1Q5K131 121 aa10.54□□□□□ -0.72
CHCHD3-203ENST00000448878 MRPL54Q6P161 138 aaKnown RBP10.54□□□□□ -0.72
CHCHD3-203ENST00000448878 Q6ZN92 141 aa10.54□□□□□ -0.72
CHCHD3-203ENST00000448878 MRPL55Q7Z7F7 128 aaKnown RBP10.54□□□□□ -0.72
CHCHD3-203ENST00000448878 C2orf88Q9BSF0 95 aa10.54□□□□□ -0.72
CHCHD3-203ENST00000448878 SMIM27A0A1W2PRY6 76 aa10.53□□□□□ -0.72
CHCHD3-203ENST00000448878 ALKBH7Q9BT30 221 aaPredicted RBP10.53□□□□□ -0.72
CHCHD3-203ENST00000448878 PYGO1Q9Y3Y4 419 aa10.53□□□□□ -0.72
CHCHD3-203ENST00000448878 RPL37AP8A6NKH3 93 aa10.52□□□□□ -0.73
CHCHD3-203ENST00000448878 RPL23P62829 140 aaKnown RBP10.52□□□□□ -0.73
CHCHD3-203ENST00000448878 NDUFA5Q16718 116 aa10.52□□□□□ -0.73
CHCHD3-203ENST00000448878 ZC2HC1BQ5TFG8 222 aa10.52□□□□□ -0.73
CHCHD3-203ENST00000448878 LINC01561Q8N1V8 128 aa10.52□□□□□ -0.73
CHCHD3-203ENST00000448878 S100A8P05109 93 aa10.51□□□□□ -0.73
CHCHD3-203ENST00000448878 LOC389332A0A1B0GUA5 103 aa10.5□□□□□ -0.73
CHCHD3-203ENST00000448878 PPBPP02775 128 aa10.5□□□□□ -0.73
CHCHD3-203ENST00000448878 LINC00173Q6ZV60 143 aa10.5□□□□□ -0.73
CHCHD3-203ENST00000448878 LINC00304Q8N9R0 145 aa10.5□□□□□ -0.73
CHCHD3-203ENST00000448878 IGLV7-46A0A075B6I9 117 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 233.9 ms