RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 DNAH8Q96JB1 4490 aa9.05□□□□□ -0.96
PDLIM2-213ENST00000448520 RMI2Q96E14 147 aa9.04□□□□□ -0.96
PDLIM2-213ENST00000448520 PYGO1Q9Y3Y4 419 aa9.04□□□□□ -0.96
PDLIM2-213ENST00000448520 CSDC2Q9Y534 153 aaKnown RBP9.04□□□□□ -0.96
PDLIM2-213ENST00000448520 FABP4P15090 132 aa9.03□□□□□ -0.96
PDLIM2-213ENST00000448520 REG3AQ06141 175 aa9.03□□□□□ -0.96
PDLIM2-213ENST00000448520 ERASQ7Z444 233 aa9.03□□□□□ -0.96
PDLIM2-213ENST00000448520 IGLV10-54A0A075B6I4 117 aa9.02□□□□□ -0.97
PDLIM2-213ENST00000448520 G0S2P27469 103 aa9.02□□□□□ -0.97
PDLIM2-213ENST00000448520 MRPS36P82909 103 aaKnown RBP9.02□□□□□ -0.97
PDLIM2-213ENST00000448520 WFDC2Q14508 124 aa9.02□□□□□ -0.97
PDLIM2-213ENST00000448520 TMEM141Q96I45 108 aa9.02□□□□□ -0.97
PDLIM2-213ENST00000448520 TIMM17AQ99595 171 aa9.02□□□□□ -0.97
PDLIM2-213ENST00000448520 PRR34Q9NV39 138 aa9.02□□□□□ -0.97
PDLIM2-213ENST00000448520 KRTAP29-1A8MX34 341 aaPredicted RBP9.01□□□□□ -0.97
PDLIM2-213ENST00000448520 CRPP02741 224 aa9.01□□□□□ -0.97
PDLIM2-213ENST00000448520 SNRPEP62304 92 aaKnown RBP9.01□□□□□ -0.97
PDLIM2-213ENST00000448520 SMAGPQ0VAQ4 97 aa9.01□□□□□ -0.97
PDLIM2-213ENST00000448520 BAALCQ8WXS3 180 aa9.01□□□□□ -0.97
PDLIM2-213ENST00000448520 IGLV2-33A0A075B6J2 118 aaPredicted RBP9□□□□□ -0.97
PDLIM2-213ENST00000448520 TRAV13-1A0A0B4J241 112 aa9□□□□□ -0.97
PDLIM2-213ENST00000448520 LECT2O14960 151 aa9□□□□□ -0.97
PDLIM2-213ENST00000448520 LEPROTL1O95214 131 aa9□□□□□ -0.97
PDLIM2-213ENST00000448520 S100A6P06703 90 aa9□□□□□ -0.97
PDLIM2-213ENST00000448520 LINC00528Q8N1L1 170 aa9□□□□□ -0.97
PDLIM2-213ENST00000448520 HIST3H2BBQ8N257 126 aa9□□□□□ -0.97
PDLIM2-213ENST00000448520 IFI27L1Q96BM0 104 aa9□□□□□ -0.97
PDLIM2-213ENST00000448520 AMELXQ99217 191 aa9□□□□□ -0.97
PDLIM2-213ENST00000448520 LINC00959A0A1B0GUT2 108 aa8.99□□□□□ -0.97
PDLIM2-213ENST00000448520 IFITM10A6NMD0 228 aa8.99□□□□□ -0.97
PDLIM2-213ENST00000448520 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.99□□□□□ -0.97
PDLIM2-213ENST00000448520 ATP5LO75964 103 aa8.99□□□□□ -0.97
PDLIM2-213ENST00000448520 Q6ZN92 141 aa8.99□□□□□ -0.97
PDLIM2-213ENST00000448520 TEX43Q6ZNM6 134 aa8.99□□□□□ -0.97
PDLIM2-213ENST00000448520 VCX2Q9H322 139 aa8.99□□□□□ -0.97
PDLIM2-213ENST00000448520 IGKV2D-24A0A075B6R9 120 aa8.98□□□□□ -0.97
PDLIM2-213ENST00000448520 H0Y8G0 127 aa8.98□□□□□ -0.97
PDLIM2-213ENST00000448520 KRTAP26-1Q6PEX3 210 aa8.98□□□□□ -0.97
PDLIM2-213ENST00000448520 C5orf52A6NGY3 159 aa8.97□□□□□ -0.97
PDLIM2-213ENST00000448520 LINC01549A6NIU2 74 aa8.97□□□□□ -0.97
PDLIM2-213ENST00000448520 CCL25O15444 150 aa8.97□□□□□ -0.97
PDLIM2-213ENST00000448520 MIAQ16674 131 aa8.97□□□□□ -0.97
PDLIM2-213ENST00000448520 CHCHD10Q8WYQ3 142 aaPredicted RBP8.97□□□□□ -0.97
PDLIM2-213ENST00000448520 CST9LQ9H4G1 147 aa8.97□□□□□ -0.97
PDLIM2-213ENST00000448520 A0A0J9YXV3 536 aa8.96□□□□□ -0.98
PDLIM2-213ENST00000448520 GAGE12HA6NDE8 117 aa8.96□□□□□ -0.98
PDLIM2-213ENST00000448520 PRSS1P07477 247 aa8.96□□□□□ -0.98
PDLIM2-213ENST00000448520 NPSP0C0P6 89 aa8.96□□□□□ -0.98
PDLIM2-213ENST00000448520 XCL1P47992 114 aa8.96□□□□□ -0.98
PDLIM2-213ENST00000448520 UBE2D1P51668 147 aa8.96□□□□□ -0.98
PDLIM2-213ENST00000448520 COX6A2Q02221 97 aa8.96□□□□□ -0.98
PDLIM2-213ENST00000448520 PMVKQ15126 192 aa8.96□□□□□ -0.98
PDLIM2-213ENST00000448520 HIST1H2BLQ99880 126 aa8.96□□□□□ -0.98
PDLIM2-213ENST00000448520 CHAC1Q9BUX1 264 aa8.96□□□□□ -0.98
PDLIM2-213ENST00000448520 C1orf43Q9BWL3 253 aa8.96□□□□□ -0.98
PDLIM2-213ENST00000448520 HSPB8Q9UJY1 196 aa8.96□□□□□ -0.98
PDLIM2-213ENST00000448520 SS18Q15532 418 aa8.95□□□□□ -0.98
PDLIM2-213ENST00000448520 C14orf177Q52M58 125 aa8.95□□□□□ -0.98
PDLIM2-213ENST00000448520 LINC00242Q5T6M2 205 aa8.95□□□□□ -0.98
PDLIM2-213ENST00000448520 SCXQ7RTU7 201 aa8.95□□□□□ -0.98
PDLIM2-213ENST00000448520 C2orf88Q9BSF0 95 aa8.95□□□□□ -0.98
PDLIM2-213ENST00000448520 S100A2P29034 98 aa8.94□□□□□ -0.98
PDLIM2-213ENST00000448520 PAPPA-AS1Q5QFB9 102 aa8.94□□□□□ -0.98
PDLIM2-213ENST00000448520 SERTAD4-AS1Q5TG53 156 aa8.94□□□□□ -0.98
PDLIM2-213ENST00000448520 PMCHL2Q9BQD1 86 aa8.94□□□□□ -0.98
PDLIM2-213ENST00000448520 IGLV4-69A0A075B6H9 119 aa8.93□□□□□ -0.98
PDLIM2-213ENST00000448520 TRAV8-4A0A0B4J246 113 aa8.93□□□□□ -0.98
PDLIM2-213ENST00000448520 C3orf79P0CE67 100 aa8.93□□□□□ -0.98
PDLIM2-213ENST00000448520 FOXI1Q12951 378 aa8.93□□□□□ -0.98
PDLIM2-213ENST00000448520 LINC01620Q4KN68 170 aa8.93□□□□□ -0.98
PDLIM2-213ENST00000448520 OXTP01178 125 aa8.92□□□□□ -0.98
PDLIM2-213ENST00000448520 KRTDAPP60985 99 aa8.92□□□□□ -0.98
PDLIM2-213ENST00000448520 C5orf38Q86SI9 138 aa8.92□□□□□ -0.98
PDLIM2-213ENST00000448520 CIRBP-AS1Q8TBR5 109 aa8.92□□□□□ -0.98
PDLIM2-213ENST00000448520 MAP1LC3CQ9BXW4 147 aa8.92□□□□□ -0.98
PDLIM2-213ENST00000448520 CHTOPQ9Y3Y2 248 aaKnown RBP8.92□□□□□ -0.98
PDLIM2-213ENST00000448520 SYS1-DBNDD2H3BUS1 97 aa8.91□□□□□ -0.98
PDLIM2-213ENST00000448520 ODF1Q14990 250 aa8.91□□□□□ -0.98
PDLIM2-213ENST00000448520 PACRGQ96M98 296 aaPredicted RBP8.91□□□□□ -0.98
PDLIM2-213ENST00000448520 MRPL35Q9NZE8 188 aaKnown RBP8.91□□□□□ -0.98
PDLIM2-213ENST00000448520 TRAV12-1A0A0B4J245 112 aa8.9□□□□□ -0.98
PDLIM2-213ENST00000448520 C11orf86A6NJI1 115 aa8.9□□□□□ -0.98
PDLIM2-213ENST00000448520 IGLC3P0DOY3 106 aa8.9□□□□□ -0.98
PDLIM2-213ENST00000448520 CD164L2Q6UWJ8 174 aa8.9□□□□□ -0.98
PDLIM2-213ENST00000448520 IGHV3OR16-9A0A0B4J2B5 98 aa8.89□□□□□ -0.99
PDLIM2-213ENST00000448520 FAM19A3Q7Z5A8 133 aa8.89□□□□□ -0.99
PDLIM2-213ENST00000448520 GEMIN7Q9H840 131 aaKnown RBP8.89□□□□□ -0.99
PDLIM2-213ENST00000448520 CDKN2A-AS1Q9UH64 79 aa8.89□□□□□ -0.99
PDLIM2-213ENST00000448520 TINCRA0A1B0GVN0 87 aa8.88□□□□□ -0.99
PDLIM2-213ENST00000448520 F8VRH5 84 aa8.88□□□□□ -0.99
PDLIM2-213ENST00000448520 KRTAP10-4P60372 401 aaPredicted RBP8.88□□□□□ -0.99
PDLIM2-213ENST00000448520 OR10D4PQ8NGN7 298 aa8.88□□□□□ -0.99
PDLIM2-213ENST00000448520 USP17L23D6RBM5 183 aa8.87□□□□□ -0.99
PDLIM2-213ENST00000448520 COX7A2LO14548 114 aa8.87□□□□□ -0.99
PDLIM2-213ENST00000448520 ZNF22P17026 224 aaPredicted RBP8.87□□□□□ -0.99
PDLIM2-213ENST00000448520 LINC00469Q8N7U9 141 aa8.87□□□□□ -0.99
PDLIM2-213ENST00000448520 C15orf56Q8N910 161 aa8.87□□□□□ -0.99
PDLIM2-213ENST00000448520 HERVK_113P63121 156 aa8.86□□□□□ -0.99
PDLIM2-213ENST00000448520 HIGD2BQ4VC39 106 aa8.86□□□□□ -0.99
PDLIM2-213ENST00000448520 LINC01545Q5VT33 79 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms