RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 COPS9Q8WXC6 57 aa9.52□□□□□ -0.89
DDX56-206ENST00000446987 IGHV1-58A0A0C4DH39 117 aa9.51□□□□□ -0.89
DDX56-206ENST00000446987 TINCRA0A1B0GVN0 87 aa9.51□□□□□ -0.89
DDX56-206ENST00000446987 H3BUA1 57 aa9.51□□□□□ -0.89
DDX56-206ENST00000446987 PRSS2P07478 247 aa9.51□□□□□ -0.89
DDX56-206ENST00000446987 RNASE4P34096 147 aaKnown RBP9.51□□□□□ -0.89
DDX56-206ENST00000446987 PFN2P35080 140 aa9.51□□□□□ -0.89
DDX56-206ENST00000446987 TIRAPP58753 221 aa9.51□□□□□ -0.89
DDX56-206ENST00000446987 RPL39P62891 51 aaKnown RBP9.51□□□□□ -0.89
DDX56-206ENST00000446987 APRG1Q8IVJ8 170 aa9.51□□□□□ -0.89
DDX56-206ENST00000446987 C4orf3Q8WVX3 66 aa9.51□□□□□ -0.89
DDX56-206ENST00000446987 UBE2E2Q96LR5 201 aa9.51□□□□□ -0.89
DDX56-206ENST00000446987 FBN3Q75N90 2809 aa9.51□□□□□ -0.89
DDX56-206ENST00000446987 SYNJ2BPP57105 145 aa9.51□□□□□ -0.89
DDX56-206ENST00000446987 NPC2P61916 151 aa9.51□□□□□ -0.89
DDX56-206ENST00000446987 MRPS36P82909 103 aaKnown RBP9.5□□□□□ -0.89
DDX56-206ENST00000446987 C9orf85Q96MD7 179 aa9.5□□□□□ -0.89
DDX56-206ENST00000446987 SERP1Q9Y6X1 66 aa9.5□□□□□ -0.89
DDX56-206ENST00000446987 TRAV12-2A0A075B6T6 113 aa9.49□□□□□ -0.89
DDX56-206ENST00000446987 ADAMTSL4-AS1Q5T5F5 129 aa9.49□□□□□ -0.89
DDX56-206ENST00000446987 LINC00482Q8N8I6 264 aa9.49□□□□□ -0.89
DDX56-206ENST00000446987 IGHV3-11P01762 117 aa9.49□□□□□ -0.89
DDX56-206ENST00000446987 BAALC-AS2P0C853 105 aa9.49□□□□□ -0.89
DDX56-206ENST00000446987 NDUFA12Q9UI09 145 aa9.49□□□□□ -0.89
DDX56-206ENST00000446987 TRBV12-3P01733 135 aa9.48□□□□□ -0.89
DDX56-206ENST00000446987 SUMO4Q6EEV6 95 aa9.48□□□□□ -0.89
DDX56-206ENST00000446987 ZFAND2AQ8N6M9 145 aa9.48□□□□□ -0.89
DDX56-206ENST00000446987 OVOL2Q9BRP0 275 aa9.48□□□□□ -0.89
DDX56-206ENST00000446987 USP17L23D6RBM5 183 aa9.47□□□□□ -0.89
DDX56-206ENST00000446987 CCL24O00175 119 aa9.47□□□□□ -0.89
DDX56-206ENST00000446987 BCE1O60756 84 aa9.47□□□□□ -0.89
DDX56-206ENST00000446987 PRR9Q5T870 116 aa9.47□□□□□ -0.89
DDX56-206ENST00000446987 C20orf203Q8NBC4 194 aa9.47□□□□□ -0.89
DDX56-206ENST00000446987 C22orf24Q9Y442 160 aa9.47□□□□□ -0.89
DDX56-206ENST00000446987 NOTCH3Q9UM47 2321 aa9.47□□□□□ -0.89
DDX56-206ENST00000446987 A0A0J9YXV3 536 aa9.47□□□□□ -0.89
DDX56-206ENST00000446987 RNASE3P12724 160 aaKnown RBP9.47□□□□□ -0.89
DDX56-206ENST00000446987 WFDC9Q8NEX5 89 aa9.47□□□□□ -0.89
DDX56-206ENST00000446987 U3KQE9 123 aa9.47□□□□□ -0.89
DDX56-206ENST00000446987 NOTCH1P46531 2555 aa9.46□□□□□ -0.89
DDX56-206ENST00000446987 IGLV4-3A0A075B6K6 122 aa9.46□□□□□ -0.9
DDX56-206ENST00000446987 FAM223BA6NKX1 122 aa9.46□□□□□ -0.9
DDX56-206ENST00000446987 FAM223AQ8IWN6 122 aa9.46□□□□□ -0.9
DDX56-206ENST00000446987 VSIG2Q96IQ7 327 aa9.46□□□□□ -0.9
DDX56-206ENST00000446987 CCDC140Q96MF4 163 aa9.46□□□□□ -0.9
DDX56-206ENST00000446987 S4R3C0 116 aa9.46□□□□□ -0.9
DDX56-206ENST00000446987 MEGF8Q7Z7M0 2845 aa9.45□□□□□ -0.9
DDX56-206ENST00000446987 PF4P02776 101 aa9.45□□□□□ -0.9
DDX56-206ENST00000446987 SLURP1P55000 103 aa9.45□□□□□ -0.9
DDX56-206ENST00000446987 C15orf32Q32M92 178 aa9.45□□□□□ -0.9
DDX56-206ENST00000446987 ATP5EP2Q5VTU8 51 aa9.45□□□□□ -0.9
DDX56-206ENST00000446987 LINC00336Q6ZUF6 198 aa9.45□□□□□ -0.9
DDX56-206ENST00000446987 USMG5Q96IX5 58 aa9.45□□□□□ -0.9
DDX56-206ENST00000446987 OBSCN-AS1Q96MR7 158 aa9.45□□□□□ -0.9
DDX56-206ENST00000446987 FAM236DA0A1B0GTK5 79 aa9.44□□□□□ -0.9
DDX56-206ENST00000446987 RS1O15537 224 aa9.44□□□□□ -0.9
DDX56-206ENST00000446987 FAM236CP0DP71 79 aa9.44□□□□□ -0.9
DDX56-206ENST00000446987 CIRBPQ14011 172 aaKnown RBP9.44□□□□□ -0.9
DDX56-206ENST00000446987 IGHV3-64A0A075B6Q5 118 aa9.43□□□□□ -0.9
DDX56-206ENST00000446987 DNAL4O96015 105 aa9.43□□□□□ -0.9
DDX56-206ENST00000446987 IGHV3-23P01764 117 aa9.43□□□□□ -0.9
DDX56-206ENST00000446987 LINC01561Q8N1V8 128 aa9.43□□□□□ -0.9
DDX56-206ENST00000446987 C1orf43Q9BWL3 253 aa9.43□□□□□ -0.9
DDX56-206ENST00000446987 UBE2D4Q9Y2X8 147 aa9.43□□□□□ -0.9
DDX56-206ENST00000446987 NDUFA1O15239 70 aa9.42□□□□□ -0.9
DDX56-206ENST00000446987 S100A7L2Q5SY68 101 aa9.42□□□□□ -0.9
DDX56-206ENST00000446987 HOXD3P31249 432 aaPredicted RBP9.42□□□□□ -0.9
DDX56-206ENST00000446987 SEC61GP60059 68 aa9.42□□□□□ -0.9
DDX56-206ENST00000446987 FHL2Q14192 279 aa9.42□□□□□ -0.9
DDX56-206ENST00000446987 OXLD1Q5BKU9 147 aa9.42□□□□□ -0.9
DDX56-206ENST00000446987 PRKDCP78527 4128 aaKnown RBP9.41□□□□□ -0.9
DDX56-206ENST00000446987 SMIM26A0A096LP01 95 aa9.41□□□□□ -0.9
DDX56-206ENST00000446987 KPRPQ5T749 579 aaPredicted RBP9.4□□□□□ -0.9
DDX56-206ENST00000446987 V9GYY9 64 aa9.4□□□□□ -0.9
DDX56-206ENST00000446987 TRBV10-3A0A0K0K1G6 114 aa9.4□□□□□ -0.91
DDX56-206ENST00000446987 LINC00308Q8TCZ7 52 aa9.4□□□□□ -0.91
DDX56-206ENST00000446987 C16orf92Q96LL3 132 aa9.4□□□□□ -0.91
DDX56-206ENST00000446987 TMEM243Q9BU79 118 aa9.4□□□□□ -0.91
DDX56-206ENST00000446987 M0QY20 66 aa9.39□□□□□ -0.91
DDX56-206ENST00000446987 CLEC19AQ6UXS0 136 aa9.39□□□□□ -0.91
DDX56-206ENST00000446987 OPRPNQ99935 248 aaPredicted RBP9.39□□□□□ -0.91
DDX56-206ENST00000446987 RPL35AP18077 110 aaKnown RBP9.38□□□□□ -0.91
DDX56-206ENST00000446987 RBMY1BA6NDE4 496 aaKnown RBP9.38□□□□□ -0.91
DDX56-206ENST00000446987 RBMY1EA6NEQ0 496 aaKnown RBP9.38□□□□□ -0.91
DDX56-206ENST00000446987 GNRH2O43555 120 aa9.38□□□□□ -0.91
DDX56-206ENST00000446987 RBMY1DP0C7P1 496 aaKnown RBP9.38□□□□□ -0.91
DDX56-206ENST00000446987 RBMY1A1P0DJD3 496 aaKnown RBP9.38□□□□□ -0.91
DDX56-206ENST00000446987 RBMY1CP0DJD4 496 aa9.38□□□□□ -0.91
DDX56-206ENST00000446987 EDN2P20800 178 aa9.38□□□□□ -0.91
DDX56-206ENST00000446987 RBMY1FQ15415 496 aaKnown RBP9.38□□□□□ -0.91
DDX56-206ENST00000446987 F5H697 171 aa9.37□□□□□ -0.91
DDX56-206ENST00000446987 RPL28P46779 137 aaKnown RBP9.37□□□□□ -0.91
DDX56-206ENST00000446987 IGLV5-45A0A087WSX0 123 aa9.36□□□□□ -0.91
DDX56-206ENST00000446987 KRTAP10-11P60412 298 aa9.36□□□□□ -0.91
DDX56-206ENST00000446987 EGFEM1PQ0D2K5 195 aa9.36□□□□□ -0.91
DDX56-206ENST00000446987 LINC00846Q9NV44 126 aa9.36□□□□□ -0.91
DDX56-206ENST00000446987 TRAV12-3A0A0B4J271 114 aa9.36□□□□□ -0.91
DDX56-206ENST00000446987 IGKV3D-7A0A0C4DH55 119 aa9.36□□□□□ -0.91
DDX56-206ENST00000446987 KNCNA6PVL3 124 aa9.36□□□□□ -0.91
DDX56-206ENST00000446987 RPL11P62913 178 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 150.6 ms