RNA–Protein interactions for RNA: ENST00000446739.1

PHTF1-207, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 4

Gene PHTF1, Length 770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-207ENST00000446739 IGHV3OR16-9A0A0B4J2B5 98 aa11.87□□□□□ -0.51
PHTF1-207ENST00000446739 LINC00242Q5T6M2 205 aa11.87□□□□□ -0.51
PHTF1-207ENST00000446739 ZC2HC1BQ5TFG8 222 aa11.87□□□□□ -0.51
PHTF1-207ENST00000446739 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.86□□□□□ -0.51
PHTF1-207ENST00000446739 KRTAP10-1P60331 282 aa11.86□□□□□ -0.51
PHTF1-207ENST00000446739 CNBPP62633 177 aaKnown RBP11.86□□□□□ -0.51
PHTF1-207ENST00000446739 PMCHL1Q16048 86 aa11.86□□□□□ -0.51
PHTF1-207ENST00000446739 HIGD2BQ4VC39 106 aa11.86□□□□□ -0.51
PHTF1-207ENST00000446739 C5orf38Q86SI9 138 aa11.86□□□□□ -0.51
PHTF1-207ENST00000446739 RYR1P21817 5038 aa11.85□□□□□ -0.51
PHTF1-207ENST00000446739 APOMO95445 188 aa11.85□□□□□ -0.51
PHTF1-207ENST00000446739 SEC11AP67812 179 aa11.85□□□□□ -0.51
PHTF1-207ENST00000446739 FAM19A3Q7Z5A8 133 aa11.85□□□□□ -0.51
PHTF1-207ENST00000446739 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.84□□□□□ -0.51
PHTF1-207ENST00000446739 PDZD11Q5EBL8 140 aa11.84□□□□□ -0.51
PHTF1-207ENST00000446739 APOBP04114 4563 aaKnown RBP11.84□□□□□ -0.51
PHTF1-207ENST00000446739 HSBP1O75506 76 aa11.83□□□□□ -0.52
PHTF1-207ENST00000446739 CDK2AP2O75956 126 aa11.83□□□□□ -0.52
PHTF1-207ENST00000446739 ATP5LO75964 103 aa11.83□□□□□ -0.52
PHTF1-207ENST00000446739 C9orf163Q8N9P6 203 aa11.83□□□□□ -0.52
PHTF1-207ENST00000446739 A0A087WZ39 114 aa11.82□□□□□ -0.52
PHTF1-207ENST00000446739 ZNF561-AS1K7EIQ3 104 aa11.82□□□□□ -0.52
PHTF1-207ENST00000446739 COX6A2Q02221 97 aa11.82□□□□□ -0.52
PHTF1-207ENST00000446739 PMVKQ15126 192 aa11.82□□□□□ -0.52
PHTF1-207ENST00000446739 CST9LQ9H4G1 147 aa11.82□□□□□ -0.52
PHTF1-207ENST00000446739 DNAH8Q96JB1 4490 aa11.81□□□□□ -0.52
PHTF1-207ENST00000446739 SLPIP03973 132 aa11.81□□□□□ -0.52
PHTF1-207ENST00000446739 HERVK_113P63121 156 aa11.81□□□□□ -0.52
PHTF1-207ENST00000446739 LINC01620Q4KN68 170 aa11.81□□□□□ -0.52
PHTF1-207ENST00000446739 LINC01561Q8N1V8 128 aa11.81□□□□□ -0.52
PHTF1-207ENST00000446739 IGHV3-64A0A075B6Q5 118 aa11.8□□□□□ -0.52
PHTF1-207ENST00000446739 SERF1AO75920 110 aa11.8□□□□□ -0.52
PHTF1-207ENST00000446739 OR10D4PQ8NGN7 298 aa11.8□□□□□ -0.52
PHTF1-207ENST00000446739 GEMIN7Q9H840 131 aaKnown RBP11.8□□□□□ -0.52
PHTF1-207ENST00000446739 LINC00310P59036 64 aa11.79□□□□□ -0.52
PHTF1-207ENST00000446739 A0A0J9YXV3 536 aa11.78□□□□□ -0.52
PHTF1-207ENST00000446739 TINCRA0A1B0GVN0 87 aa11.78□□□□□ -0.52
PHTF1-207ENST00000446739 SPAG11BQ08648 103 aa11.78□□□□□ -0.52
PHTF1-207ENST00000446739 ORAOV1Q8WV07 137 aa11.78□□□□□ -0.52
PHTF1-207ENST00000446739 LINC00526Q96FQ7 95 aa11.78□□□□□ -0.52
PHTF1-207ENST00000446739 IGLV4-69A0A075B6H9 119 aa11.77□□□□□ -0.53
PHTF1-207ENST00000446739 HIST1H2BKO60814 126 aa11.77□□□□□ -0.53
PHTF1-207ENST00000446739 HIST1H2BJP06899 126 aa11.77□□□□□ -0.53
PHTF1-207ENST00000446739 HIST1H2BOP23527 126 aa11.77□□□□□ -0.53
PHTF1-207ENST00000446739 HIST1H2BBP33778 126 aa11.77□□□□□ -0.53
PHTF1-207ENST00000446739 NDUFA6P56556 154 aa11.77□□□□□ -0.53
PHTF1-207ENST00000446739 HIST1H2BDP58876 126 aa11.77□□□□□ -0.53
PHTF1-207ENST00000446739 HIST1H2BCP62807 126 aa11.77□□□□□ -0.53
PHTF1-207ENST00000446739 HIST2H2BEQ16778 126 aa11.77□□□□□ -0.53
PHTF1-207ENST00000446739 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.77□□□□□ -0.53
PHTF1-207ENST00000446739 Q6ZSA8 131 aa11.77□□□□□ -0.53
PHTF1-207ENST00000446739 FAM19A2Q8N3H0 131 aa11.77□□□□□ -0.53
PHTF1-207ENST00000446739 HIST1H2BHQ93079 126 aa11.77□□□□□ -0.53
PHTF1-207ENST00000446739 C2orf48Q96LS8 159 aa11.77□□□□□ -0.53
PHTF1-207ENST00000446739 HIST1H2BNQ99877 126 aa11.77□□□□□ -0.53
PHTF1-207ENST00000446739 HIST1H2BMQ99879 126 aa11.77□□□□□ -0.53
PHTF1-207ENST00000446739 HERC2O95714 4834 aa11.76□□□□□ -0.53
PHTF1-207ENST00000446739 HSPG2P98160 4391 aa11.75□□□□□ -0.53
PHTF1-207ENST00000446739 SYCNQ0VAF6 134 aa11.75□□□□□ -0.53
PHTF1-207ENST00000446739 IFI27L1Q96BM0 104 aa11.75□□□□□ -0.53
PHTF1-207ENST00000446739 CARD19Q96LW7 228 aa11.75□□□□□ -0.53
PHTF1-207ENST00000446739 FAM30AQ9NZY2 134 aa11.75□□□□□ -0.53
PHTF1-207ENST00000446739 CDKN2A-AS1Q9UH64 79 aa11.75□□□□□ -0.53
PHTF1-207ENST00000446739 IGLV5-45A0A087WSX0 123 aa11.74□□□□□ -0.53
PHTF1-207ENST00000446739 F8WDY8 70 aa11.74□□□□□ -0.53
PHTF1-207ENST00000446739 XGP55808 180 aa11.74□□□□□ -0.53
PHTF1-207ENST00000446739 SDIM1Q6ZPB5 146 aa11.74□□□□□ -0.53
PHTF1-207ENST00000446739 LINC00469Q8N7U9 141 aa11.74□□□□□ -0.53
PHTF1-207ENST00000446739 CAMK2N2Q96S95 79 aa11.74□□□□□ -0.53
PHTF1-207ENST00000446739 NUPR1O60356 82 aa11.73□□□□□ -0.53
PHTF1-207ENST00000446739 LEPROTL1O95214 131 aa11.73□□□□□ -0.53
PHTF1-207ENST00000446739 IGLC3P0DOY3 106 aa11.73□□□□□ -0.53
PHTF1-207ENST00000446739 PACRGQ96M98 296 aaPredicted RBP11.73□□□□□ -0.53
PHTF1-207ENST00000446739 PKIGQ9Y2B9 76 aa11.73□□□□□ -0.53
PHTF1-207ENST00000446739 TRAV12-1A0A0B4J245 112 aa11.72□□□□□ -0.53
PHTF1-207ENST00000446739 CHAC1Q9BUX1 264 aa11.72□□□□□ -0.53
PHTF1-207ENST00000446739 KIAA0087Q14695 138 aa11.71□□□□□ -0.53
PHTF1-207ENST00000446739 Q6ZRU5 148 aa11.71□□□□□ -0.53
PHTF1-207ENST00000446739 H3BRM9 83 aa11.7□□□□□ -0.54
PHTF1-207ENST00000446739 NDUFA1O15239 70 aa11.7□□□□□ -0.54
PHTF1-207ENST00000446739 HSPB8Q9UJY1 196 aa11.7□□□□□ -0.54
PHTF1-207ENST00000446739 PRSS2P07478 247 aa11.69□□□□□ -0.54
PHTF1-207ENST00000446739 Q8IZM0 81 aa11.69□□□□□ -0.54
PHTF1-207ENST00000446739 MRPL35Q9NZE8 188 aaKnown RBP11.69□□□□□ -0.54
PHTF1-207ENST00000446739 CHTOPQ9Y3Y2 248 aaKnown RBP11.69□□□□□ -0.54
PHTF1-207ENST00000446739 SMIM1B2RUZ4 78 aa11.68□□□□□ -0.54
PHTF1-207ENST00000446739 RNF151Q2KHN1 245 aa11.68□□□□□ -0.54
PHTF1-207ENST00000446739 TOMM7Q9P0U1 55 aa11.68□□□□□ -0.54
PHTF1-207ENST00000446739 FABP4P15090 132 aa11.67□□□□□ -0.54
PHTF1-207ENST00000446739 ZNF22P17026 224 aaPredicted RBP11.67□□□□□ -0.54
PHTF1-207ENST00000446739 COA6Q5JTJ3 125 aaKnown RBP11.67□□□□□ -0.54
PHTF1-207ENST00000446739 C11orf86A6NJI1 115 aa11.66□□□□□ -0.54
PHTF1-207ENST00000446739 F8VRH5 84 aa11.66□□□□□ -0.54
PHTF1-207ENST00000446739 HAMPP81172 84 aa11.66□□□□□ -0.54
PHTF1-207ENST00000446739 CIRBPQ14011 172 aaKnown RBP11.66□□□□□ -0.54
PHTF1-207ENST00000446739 C6orf226Q5I0X4 101 aa11.66□□□□□ -0.54
PHTF1-207ENST00000446739 UNQ6190/PRO20217Q6UXQ8 127 aa11.66□□□□□ -0.54
PHTF1-207ENST00000446739 SCXQ7RTU7 201 aa11.66□□□□□ -0.54
PHTF1-207ENST00000446739 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.66□□□□□ -0.54
PHTF1-207ENST00000446739 LOC107984640A0A0U1RRK4 108 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms