RNA–Protein interactions for RNA: ENST00000446553.2

CDCA3-203, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 646 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-203ENST00000446553 TRGC2P03986 189 aa7.12□□□□□ -1.27
CDCA3-203ENST00000446553 CKS2P33552 79 aa7.12□□□□□ -1.27
CDCA3-203ENST00000446553 FABP9Q0Z7S8 132 aa7.12□□□□□ -1.27
CDCA3-203ENST00000446553 C7orf33Q8WU49 177 aa7.12□□□□□ -1.27
CDCA3-203ENST00000446553 MRPL18Q9H0U6 180 aaKnown RBP7.12□□□□□ -1.27
CDCA3-203ENST00000446553 ZNF561-AS1K7EIQ3 104 aa7.11□□□□□ -1.27
CDCA3-203ENST00000446553 MAJINQ3KP22 176 aa7.11□□□□□ -1.27
CDCA3-203ENST00000446553 CARD19Q96LW7 228 aa7.11□□□□□ -1.27
CDCA3-203ENST00000446553 SMIM2Q9BVW6 85 aa7.11□□□□□ -1.27
CDCA3-203ENST00000446553 A0A096LNI7 61 aa7.1□□□□□ -1.27
CDCA3-203ENST00000446553 COX7A2LO14548 114 aa7.1□□□□□ -1.27
CDCA3-203ENST00000446553 TNFRSF6BO95407 300 aa7.1□□□□□ -1.27
CDCA3-203ENST00000446553 SYCNQ0VAF6 134 aa7.1□□□□□ -1.27
CDCA3-203ENST00000446553 C2orf48Q96LS8 159 aa7.1□□□□□ -1.27
CDCA3-203ENST00000446553 SPANXA1Q9NS26 97 aa7.1□□□□□ -1.27
CDCA3-203ENST00000446553 IGKV2-24A0A0C4DH68 120 aa7.09□□□□□ -1.27
CDCA3-203ENST00000446553 MALP21145 153 aa7.09□□□□□ -1.27
CDCA3-203ENST00000446553 MRPS36P82909 103 aaKnown RBP7.09□□□□□ -1.27
CDCA3-203ENST00000446553 ORMDL3Q8N138 153 aa7.09□□□□□ -1.27
CDCA3-203ENST00000446553 STPG4Q8N801 248 aa7.09□□□□□ -1.27
CDCA3-203ENST00000446553 LAMTOR2Q9Y2Q5 125 aa7.09□□□□□ -1.27
CDCA3-203ENST00000446553 IGLV4-69A0A075B6H9 119 aa7.08□□□□□ -1.28
CDCA3-203ENST00000446553 PRSS47A8MTI9 375 aa7.08□□□□□ -1.28
CDCA3-203ENST00000446553 D6R8Y8 96 aa7.08□□□□□ -1.28
CDCA3-203ENST00000446553 F8WDY8 70 aa7.08□□□□□ -1.28
CDCA3-203ENST00000446553 APOMO95445 188 aa7.08□□□□□ -1.28
CDCA3-203ENST00000446553 RAB5BP61020 215 aa7.08□□□□□ -1.28
CDCA3-203ENST00000446553 RNF151Q2KHN1 245 aa7.08□□□□□ -1.28
CDCA3-203ENST00000446553 Q6ZUT4 128 aa7.08□□□□□ -1.28
CDCA3-203ENST00000446553 TRAV13-1A0A0B4J241 112 aa7.07□□□□□ -1.28
CDCA3-203ENST00000446553 LOC107984640A0A0U1RRK4 108 aa7.07□□□□□ -1.28
CDCA3-203ENST00000446553 MT1HL1P0DM35 61 aa7.07□□□□□ -1.28
CDCA3-203ENST00000446553 KIAA1644Q3SXP7 199 aa7.07□□□□□ -1.28
CDCA3-203ENST00000446553 OR10D4PQ8NGN7 298 aa7.07□□□□□ -1.28
CDCA3-203ENST00000446553 FAM104AQ969W3 186 aa7.07□□□□□ -1.28
CDCA3-203ENST00000446553 ALKBH7Q9BT30 221 aaPredicted RBP7.07□□□□□ -1.28
CDCA3-203ENST00000446553 TNXBP22105 4242 aa7.06□□□□□ -1.28
CDCA3-203ENST00000446553 NPYP01303 97 aa7.06□□□□□ -1.28
CDCA3-203ENST00000446553 PTTG1IPP53801 180 aa7.06□□□□□ -1.28
CDCA3-203ENST00000446553 RPL39P62891 51 aaKnown RBP7.06□□□□□ -1.28
CDCA3-203ENST00000446553 PRR3P79522 188 aaKnown RBP7.06□□□□□ -1.28
CDCA3-203ENST00000446553 LINC00526Q96FQ7 95 aa7.06□□□□□ -1.28
CDCA3-203ENST00000446553 PRELID3AQ96N28 172 aa7.06□□□□□ -1.28
CDCA3-203ENST00000446553 PYGO1Q9Y3Y4 419 aa7.06□□□□□ -1.28
CDCA3-203ENST00000446553 IGHV3OR16-9A0A0B4J2B5 98 aa7.05□□□□□ -1.28
CDCA3-203ENST00000446553 HIST1H2BKO60814 126 aa7.05□□□□□ -1.28
CDCA3-203ENST00000446553 HIST1H2BJP06899 126 aa7.05□□□□□ -1.28
CDCA3-203ENST00000446553 HIST1H2BOP23527 126 aa7.05□□□□□ -1.28
CDCA3-203ENST00000446553 HIST1H2BBP33778 126 aa7.05□□□□□ -1.28
CDCA3-203ENST00000446553 HIST1H2BDP58876 126 aa7.05□□□□□ -1.28
CDCA3-203ENST00000446553 HIST1H2BCP62807 126 aa7.05□□□□□ -1.28
CDCA3-203ENST00000446553 HIST2H2BEQ16778 126 aa7.05□□□□□ -1.28
CDCA3-203ENST00000446553 RNASE13Q5GAN3 156 aaKnown RBP7.05□□□□□ -1.28
CDCA3-203ENST00000446553 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.05□□□□□ -1.28
CDCA3-203ENST00000446553 HIST1H2BHQ93079 126 aa7.05□□□□□ -1.28
CDCA3-203ENST00000446553 CAMK2N2Q96S95 79 aa7.05□□□□□ -1.28
CDCA3-203ENST00000446553 HIST1H2BNQ99877 126 aa7.05□□□□□ -1.28
CDCA3-203ENST00000446553 HIST1H2BMQ99879 126 aa7.05□□□□□ -1.28
CDCA3-203ENST00000446553 C5orf38Q86SI9 138 aa7.04□□□□□ -1.28
CDCA3-203ENST00000446553 MRPL35Q9NZE8 188 aaKnown RBP7.04□□□□□ -1.28
CDCA3-203ENST00000446553 K7EMI3 77 aa7.03□□□□□ -1.28
CDCA3-203ENST00000446553 NPSP0C0P6 89 aa7.03□□□□□ -1.28
CDCA3-203ENST00000446553 IFI27P40305 119 aaPredicted RBP7.03□□□□□ -1.28
CDCA3-203ENST00000446553 SPAG11BQ08648 103 aa7.03□□□□□ -1.28
CDCA3-203ENST00000446553 Q6ZRP5 223 aa7.03□□□□□ -1.28
CDCA3-203ENST00000446553 UBR4Q5T4S7 5183 aa7.03□□□□□ -1.28
CDCA3-203ENST00000446553 IFITM10A6NMD0 228 aa7.02□□□□□ -1.29
CDCA3-203ENST00000446553 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.02□□□□□ -1.29
CDCA3-203ENST00000446553 COA6Q5JTJ3 125 aaKnown RBP7.02□□□□□ -1.29
CDCA3-203ENST00000446553 SPINK6Q6UWN8 80 aa7.02□□□□□ -1.29
CDCA3-203ENST00000446553 C18orf32Q8TCD1 76 aa7.02□□□□□ -1.29
CDCA3-203ENST00000446553 LINC01600Q96MT4 127 aa7.02□□□□□ -1.29
CDCA3-203ENST00000446553 MAP1LC3AQ9H492 121 aa7.02□□□□□ -1.29
CDCA3-203ENST00000446553 NXT2Q9NPJ8 142 aaKnown RBP7.02□□□□□ -1.29
CDCA3-203ENST00000446553 PLA2G2DQ9UNK4 145 aa7.02□□□□□ -1.29
CDCA3-203ENST00000446553 A0A087WZ39 114 aa7.01□□□□□ -1.29
CDCA3-203ENST00000446553 S100A6P06703 90 aa7.01□□□□□ -1.29
CDCA3-203ENST00000446553 TLX1NBP0CAT3 122 aa7.01□□□□□ -1.29
CDCA3-203ENST00000446553 GAGE2BQ13066 116 aa7.01□□□□□ -1.29
CDCA3-203ENST00000446553 SRSF9Q13242 221 aaKnown RBP eCLIP7.01□□□□□ -1.29
CDCA3-203ENST00000446553 BAGE3Q86Y29 109 aa7.01□□□□□ -1.29
CDCA3-203ENST00000446553 LINC01561Q8N1V8 128 aa7.01□□□□□ -1.29
CDCA3-203ENST00000446553 TMEM141Q96I45 108 aa7.01□□□□□ -1.29
CDCA3-203ENST00000446553 OPRPNQ99935 248 aaPredicted RBP7.01□□□□□ -1.29
CDCA3-203ENST00000446553 TMA7Q9Y2S6 64 aaKnown RBP7.01□□□□□ -1.29
CDCA3-203ENST00000446553 IGLV4-3A0A075B6K6 122 aa7□□□□□ -1.29
CDCA3-203ENST00000446553 NDUFA1O15239 70 aa7□□□□□ -1.29
CDCA3-203ENST00000446553 NDUFA6P56556 154 aa7□□□□□ -1.29
CDCA3-203ENST00000446553 Q8N8P6 123 aa7□□□□□ -1.29
CDCA3-203ENST00000446553 ORAOV1Q8WV07 137 aa7□□□□□ -1.29
CDCA3-203ENST00000446553 CHCHD1Q96BP2 118 aaKnown RBP7□□□□□ -1.29
CDCA3-203ENST00000446553 A0A1W2PNN7 141 aa6.99□□□□□ -1.29
CDCA3-203ENST00000446553 LINC01546A6NGU7 62 aa6.99□□□□□ -1.29
CDCA3-203ENST00000446553 LINC00614P0C842 121 aa6.99□□□□□ -1.29
CDCA3-203ENST00000446553 ORMDL2Q53FV1 153 aa6.99□□□□□ -1.29
CDCA3-203ENST00000446553 C9orf116Q5BN46 136 aaPredicted RBP6.99□□□□□ -1.29
CDCA3-203ENST00000446553 LINC00242Q5T6M2 205 aa6.99□□□□□ -1.29
CDCA3-203ENST00000446553 REG3GQ6UW15 175 aa6.99□□□□□ -1.29
CDCA3-203ENST00000446553 FA2HQ7L5A8 372 aa6.99□□□□□ -1.29
CDCA3-203ENST00000446553 CYSLTR1Q9Y271 337 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms