RNA–Protein interactions for RNA: ENST00000445346.1

LINC02549-201, Transcript of long intergenic non-protein coding RNA 2549, humanhuman

TSL 1 (best) BASIC

Gene LINC02549, Length 674 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02549-201ENST00000445346 RNASE7Q9H1E1 156 aaKnown RBP4.79□□□□□ -1.64
LINC02549-201ENST00000445346 TRBV20OR9-2A0A075B6H5 130 aa4.78□□□□□ -1.64
LINC02549-201ENST00000445346 TRBV6-5A0A0K0K1A5 114 aa4.78□□□□□ -1.64
LINC02549-201ENST00000445346 C7orf77A4D0Y5 90 aa4.78□□□□□ -1.64
LINC02549-201ENST00000445346 TSHBP01222 138 aa4.78□□□□□ -1.64
LINC02549-201ENST00000445346 FCER1GP30273 86 aa4.78□□□□□ -1.64
LINC02549-201ENST00000445346 RPL13AP40429 203 aaKnown RBP4.78□□□□□ -1.64
LINC02549-201ENST00000445346 SPAG11BQ08648 103 aa4.78□□□□□ -1.64
LINC02549-201ENST00000445346 SMAGPQ0VAQ4 97 aa4.78□□□□□ -1.64
LINC02549-201ENST00000445346 C5orf38Q86SI9 138 aa4.78□□□□□ -1.64
LINC02549-201ENST00000445346 BORCS7Q96B45 105 aa4.78□□□□□ -1.64
LINC02549-201ENST00000445346 UBE2BP63146 152 aa4.77□□□□□ -1.65
LINC02549-201ENST00000445346 RNASE13Q5GAN3 156 aaKnown RBP4.77□□□□□ -1.65
LINC02549-201ENST00000445346 FAM19A5Q7Z5A7 132 aaPredicted RBP4.77□□□□□ -1.65
LINC02549-201ENST00000445346 IMMP2LQ96T52 175 aa4.77□□□□□ -1.65
LINC02549-201ENST00000445346 FAM168BA1KXE4 195 aa4.76□□□□□ -1.65
LINC02549-201ENST00000445346 GATCO43716 136 aaKnown RBP4.76□□□□□ -1.65
LINC02549-201ENST00000445346 TNFRSF6BO95407 300 aa4.76□□□□□ -1.65
LINC02549-201ENST00000445346 TSPAN13O95857 204 aa4.76□□□□□ -1.65
LINC02549-201ENST00000445346 OCC1Q8TAD7 63 aa4.76□□□□□ -1.65
LINC02549-201ENST00000445346 MUC2Q02817 5179 aa4.76□□□□□ -1.65
LINC02549-201ENST00000445346 TRBV27A0A0K0K1C4 114 aa4.75□□□□□ -1.65
LINC02549-201ENST00000445346 HMSDA8MTL9 139 aa4.75□□□□□ -1.65
LINC02549-201ENST00000445346 A8MWL6 223 aa4.75□□□□□ -1.65
LINC02549-201ENST00000445346 K7EN84 100 aa4.75□□□□□ -1.65
LINC02549-201ENST00000445346 VCYO14598 125 aa4.75□□□□□ -1.65
LINC02549-201ENST00000445346 NDUFA1O15239 70 aa4.75□□□□□ -1.65
LINC02549-201ENST00000445346 POLR2KP53803 58 aaKnown RBP4.75□□□□□ -1.65
LINC02549-201ENST00000445346 TMEM241Q24JQ0 296 aa4.75□□□□□ -1.65
LINC02549-201ENST00000445346 GAGE2EQ4V326 116 aa4.75□□□□□ -1.65
LINC02549-201ENST00000445346 OR10D4PQ8NGN7 298 aa4.75□□□□□ -1.65
LINC02549-201ENST00000445346 ORAOV1Q8WV07 137 aa4.75□□□□□ -1.65
LINC02549-201ENST00000445346 TMEM18Q96B42 140 aa4.75□□□□□ -1.65
LINC02549-201ENST00000445346 MRPL35Q9NZE8 188 aaKnown RBP4.75□□□□□ -1.65
LINC02549-201ENST00000445346 GAGE2DQ9UEU5 116 aa4.75□□□□□ -1.65
LINC02549-201ENST00000445346 CSDC2Q9Y534 153 aaKnown RBP4.75□□□□□ -1.65
LINC02549-201ENST00000445346 F8WDY8 70 aa4.74□□□□□ -1.65
LINC02549-201ENST00000445346 M0QXV9 152 aa4.74□□□□□ -1.65
LINC02549-201ENST00000445346 KRTAP1-4P0C5Y4 121 aa4.74□□□□□ -1.65
LINC02549-201ENST00000445346 KRTAP11-1Q8IUC1 163 aa4.74□□□□□ -1.65
LINC02549-201ENST00000445346 KIR2DL4Q99706 377 aa4.74□□□□□ -1.65
LINC02549-201ENST00000445346 CARHSP1Q9Y2V2 147 aaKnown RBP4.74□□□□□ -1.65
LINC02549-201ENST00000445346 UBE2D4Q9Y2X8 147 aa4.74□□□□□ -1.65
LINC02549-201ENST00000445346 PPP1R17O96001 155 aa4.73□□□□□ -1.65
LINC02549-201ENST00000445346 RAB4AP20338 218 aa4.73□□□□□ -1.65
LINC02549-201ENST00000445346 TAGLN2P37802 199 aaKnown RBP4.73□□□□□ -1.65
LINC02549-201ENST00000445346 RGS21Q2M5E4 152 aa4.73□□□□□ -1.65
LINC02549-201ENST00000445346 UNQ6190/PRO20217Q6UXQ8 127 aa4.73□□□□□ -1.65
LINC02549-201ENST00000445346 Q6ZUT4 128 aa4.73□□□□□ -1.65
LINC02549-201ENST00000445346 AMN1Q8IY45 258 aa4.73□□□□□ -1.65
LINC02549-201ENST00000445346 TMEM191AQ9H0A3 160 aa4.73□□□□□ -1.65
LINC02549-201ENST00000445346 A0A1B0GUT8 65 aa4.72□□□□□ -1.65
LINC02549-201ENST00000445346 SMKR1H3BMG3 65 aa4.72□□□□□ -1.65
LINC02549-201ENST00000445346 TLX1NBP0CAT3 122 aa4.72□□□□□ -1.65
LINC02549-201ENST00000445346 HIGD1CA8MV81 97 aa4.71□□□□□ -1.66
LINC02549-201ENST00000445346 CEBPGP53567 150 aa4.71□□□□□ -1.66
LINC02549-201ENST00000445346 FAM231DQ6ZW35 169 aa4.71□□□□□ -1.66
LINC02549-201ENST00000445346 SVIPQ8NHG7 77 aa4.71□□□□□ -1.66
LINC02549-201ENST00000445346 TIMM21Q9BVV7 248 aa4.71□□□□□ -1.66
LINC02549-201ENST00000445346 SMDT1Q9H4I9 107 aa4.71□□□□□ -1.66
LINC02549-201ENST00000445346 C6orf48Q9UBA6 75 aa4.71□□□□□ -1.66
LINC02549-201ENST00000445346 PPP1R2P9O14990 202 aa4.7□□□□□ -1.66
LINC02549-201ENST00000445346 ZNF861PO60384 105 aa4.7□□□□□ -1.66
LINC02549-201ENST00000445346 RIGQ13278 110 aa4.7□□□□□ -1.66
LINC02549-201ENST00000445346 PACRGQ96M98 296 aaPredicted RBP4.7□□□□□ -1.66
LINC02549-201ENST00000445346 BATF3Q9NR55 127 aa4.7□□□□□ -1.66
LINC02549-201ENST00000445346 TGIF2-C20orf24A0A0A6YYL0 155 aa4.69□□□□□ -1.66
LINC02549-201ENST00000445346 IGHV3OR16-9A0A0B4J2B5 98 aa4.69□□□□□ -1.66
LINC02549-201ENST00000445346 IFITM10A6NMD0 228 aa4.69□□□□□ -1.66
LINC02549-201ENST00000445346 TCAPO15273 167 aa4.69□□□□□ -1.66
LINC02549-201ENST00000445346 RPL39P62891 51 aaKnown RBP4.69□□□□□ -1.66
LINC02549-201ENST00000445346 HBBP68871 147 aa4.69□□□□□ -1.66
LINC02549-201ENST00000445346 KRTAP7-1Q8IUC3 87 aa4.69□□□□□ -1.66
LINC02549-201ENST00000445346 TYMSOSQ8TAI1 123 aa4.69□□□□□ -1.66
LINC02549-201ENST00000445346 TRBV30A0A0K0K1B3 111 aa4.68□□□□□ -1.66
LINC02549-201ENST00000445346 NDUFC2-KCTD14E9PQ53 114 aa4.68□□□□□ -1.66
LINC02549-201ENST00000445346 TMEM250H0YL14 139 aa4.68□□□□□ -1.66
LINC02549-201ENST00000445346 NUPR1O60356 82 aa4.68□□□□□ -1.66
LINC02549-201ENST00000445346 CRYGAP11844 174 aa4.68□□□□□ -1.66
LINC02549-201ENST00000445346 SPANXA1Q9NS26 97 aa4.68□□□□□ -1.66
LINC02549-201ENST00000445346 RPL28P46779 137 aaKnown RBP4.67□□□□□ -1.66
LINC02549-201ENST00000445346 LBHQ53QV2 105 aaPredicted RBP4.67□□□□□ -1.66
LINC02549-201ENST00000445346 C9orf129Q5T035 196 aaKnown RBP4.67□□□□□ -1.66
LINC02549-201ENST00000445346 C2orf82Q6UX34 121 aa4.67□□□□□ -1.66
LINC02549-201ENST00000445346 C20orf78Q9BR46 151 aa4.67□□□□□ -1.66
LINC02549-201ENST00000445346 CTDSP1Q9GZU7 261 aa4.67□□□□□ -1.66
LINC02549-201ENST00000445346 A0A087X002 238 aa4.66□□□□□ -1.66
LINC02549-201ENST00000445346 LINC00862A6NCI5 91 aa4.66□□□□□ -1.66
LINC02549-201ENST00000445346 PRSS2P07478 247 aa4.66□□□□□ -1.66
LINC02549-201ENST00000445346 CKS2P33552 79 aa4.66□□□□□ -1.66
LINC02549-201ENST00000445346 MRPS36P82909 103 aaKnown RBP4.66□□□□□ -1.66
LINC02549-201ENST00000445346 KIAA0087Q14695 138 aa4.66□□□□□ -1.66
LINC02549-201ENST00000445346 MRPL51Q4U2R6 128 aaKnown RBP4.66□□□□□ -1.66
LINC02549-201ENST00000445346 LINC01551Q86U37 167 aa4.66□□□□□ -1.66
LINC02549-201ENST00000445346 SLC51BQ86UW2 128 aa4.66□□□□□ -1.66
LINC02549-201ENST00000445346 LINC00469Q8N7U9 141 aa4.66□□□□□ -1.66
LINC02549-201ENST00000445346 SMIM7Q9BQ49 75 aa4.66□□□□□ -1.66
LINC02549-201ENST00000445346 OSTCQ9NRP0 149 aa4.66□□□□□ -1.66
LINC02549-201ENST00000445346 C22orf24Q9Y442 160 aa4.66□□□□□ -1.66
LINC02549-201ENST00000445346 ZNF727A8MUV8 499 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms