RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 NXT2Q9NPJ8 142 aaKnown RBP6.89□□□□□ -1.31
SF3A1-203ENST00000444440 TRAV13-1A0A0B4J241 112 aa6.88□□□□□ -1.31
SF3A1-203ENST00000444440 SNAPINO95295 136 aa6.88□□□□□ -1.31
SF3A1-203ENST00000444440 APOC3P02656 99 aa6.88□□□□□ -1.31
SF3A1-203ENST00000444440 MALP21145 153 aa6.88□□□□□ -1.31
SF3A1-203ENST00000444440 IFI27P40305 119 aaPredicted RBP6.88□□□□□ -1.31
SF3A1-203ENST00000444440 ORMDL2Q53FV1 153 aa6.88□□□□□ -1.31
SF3A1-203ENST00000444440 PYGO1Q9Y3Y4 419 aa6.88□□□□□ -1.31
SF3A1-203ENST00000444440 COX7A2LO14548 114 aa6.87□□□□□ -1.31
SF3A1-203ENST00000444440 MT-ND6P03923 174 aa6.87□□□□□ -1.31
SF3A1-203ENST00000444440 KIAA1644Q3SXP7 199 aa6.87□□□□□ -1.31
SF3A1-203ENST00000444440 Q6ZUT4 128 aa6.87□□□□□ -1.31
SF3A1-203ENST00000444440 SVBPQ8N300 66 aa6.87□□□□□ -1.31
SF3A1-203ENST00000444440 DPH3Q96FX2 82 aa6.87□□□□□ -1.31
SF3A1-203ENST00000444440 CYSLTR1Q9Y271 337 aa6.87□□□□□ -1.31
SF3A1-203ENST00000444440 A0A096LNI7 61 aa6.86□□□□□ -1.31
SF3A1-203ENST00000444440 IGKV2-24A0A0C4DH68 120 aa6.86□□□□□ -1.31
SF3A1-203ENST00000444440 ZNF561-AS1K7EIQ3 104 aa6.86□□□□□ -1.31
SF3A1-203ENST00000444440 APOMO95445 188 aa6.86□□□□□ -1.31
SF3A1-203ENST00000444440 PLAC8Q9NZF1 115 aa6.86□□□□□ -1.31
SF3A1-203ENST00000444440 IFITM10A6NMD0 228 aa6.85□□□□□ -1.31
SF3A1-203ENST00000444440 FABP9Q0Z7S8 132 aa6.85□□□□□ -1.31
SF3A1-203ENST00000444440 C2orf66Q6UXQ4 117 aa6.85□□□□□ -1.31
SF3A1-203ENST00000444440 Q6ZN92 141 aa6.85□□□□□ -1.31
SF3A1-203ENST00000444440 TMEM141Q96I45 108 aa6.85□□□□□ -1.31
SF3A1-203ENST00000444440 PKIGQ9Y2B9 76 aa6.85□□□□□ -1.31
SF3A1-203ENST00000444440 LINC01549A6NIU2 74 aa6.84□□□□□ -1.31
SF3A1-203ENST00000444440 NPSP0C0P6 89 aa6.84□□□□□ -1.31
SF3A1-203ENST00000444440 MAJINQ3KP22 176 aa6.84□□□□□ -1.31
SF3A1-203ENST00000444440 PAPPA-AS1Q5QFB9 102 aa6.84□□□□□ -1.31
SF3A1-203ENST00000444440 TEX43Q6ZNM6 134 aa6.84□□□□□ -1.31
SF3A1-203ENST00000444440 OPRPNQ99935 248 aaPredicted RBP6.84□□□□□ -1.31
SF3A1-203ENST00000444440 C2orf88Q9BSF0 95 aa6.84□□□□□ -1.31
SF3A1-203ENST00000444440 MRPL18Q9H0U6 180 aaKnown RBP6.84□□□□□ -1.31
SF3A1-203ENST00000444440 VCX2Q9H322 139 aa6.84□□□□□ -1.31
SF3A1-203ENST00000444440 OXTP01178 125 aa6.83□□□□□ -1.32
SF3A1-203ENST00000444440 C5orf38Q86SI9 138 aa6.83□□□□□ -1.32
SF3A1-203ENST00000444440 ALKBH7Q9BT30 221 aaPredicted RBP6.83□□□□□ -1.32
SF3A1-203ENST00000444440 IGLV4-69A0A075B6H9 119 aa6.82□□□□□ -1.32
SF3A1-203ENST00000444440 IGLV4-3A0A075B6K6 122 aa6.82□□□□□ -1.32
SF3A1-203ENST00000444440 TGIF2-C20orf24A0A0A6YYL0 155 aa6.82□□□□□ -1.32
SF3A1-203ENST00000444440 MT1HL1P0DM35 61 aa6.82□□□□□ -1.32
SF3A1-203ENST00000444440 SYCNQ0VAF6 134 aa6.82□□□□□ -1.32
SF3A1-203ENST00000444440 Q6ZRU5 148 aa6.82□□□□□ -1.32
SF3A1-203ENST00000444440 STPG4Q8N801 248 aa6.82□□□□□ -1.32
SF3A1-203ENST00000444440 CARD19Q96LW7 228 aa6.82□□□□□ -1.32
SF3A1-203ENST00000444440 SMCO4Q9NRQ5 59 aa6.82□□□□□ -1.32
SF3A1-203ENST00000444440 TRAPPC1Q9Y5R8 145 aa6.82□□□□□ -1.32
SF3A1-203ENST00000444440 UBR4Q5T4S7 5183 aa6.82□□□□□ -1.32
SF3A1-203ENST00000444440 F8WDY8 70 aa6.81□□□□□ -1.32
SF3A1-203ENST00000444440 FA2HQ7L5A8 372 aa6.81□□□□□ -1.32
SF3A1-203ENST00000444440 OR10D4PQ8NGN7 298 aa6.81□□□□□ -1.32
SF3A1-203ENST00000444440 TOMM6Q96B49 74 aa6.81□□□□□ -1.32
SF3A1-203ENST00000444440 C2orf48Q96LS8 159 aa6.81□□□□□ -1.32
SF3A1-203ENST00000444440 LINC00474Q9P2X8 69 aa6.81□□□□□ -1.32
SF3A1-203ENST00000444440 IGHV3OR16-9A0A0B4J2B5 98 aa6.8□□□□□ -1.32
SF3A1-203ENST00000444440 IGIPA6NJ69 53 aa6.8□□□□□ -1.32
SF3A1-203ENST00000444440 SEC11AP67812 179 aa6.8□□□□□ -1.32
SF3A1-203ENST00000444440 ERASQ7Z444 233 aa6.8□□□□□ -1.32
SF3A1-203ENST00000444440 SCGB3A1Q96QR1 104 aa6.8□□□□□ -1.32
SF3A1-203ENST00000444440 CAMK2N2Q96S95 79 aa6.8□□□□□ -1.32
SF3A1-203ENST00000444440 AMELXQ99217 191 aa6.8□□□□□ -1.32
SF3A1-203ENST00000444440 TIMM17AQ99595 171 aa6.8□□□□□ -1.32
SF3A1-203ENST00000444440 LINC01546A6NGU7 62 aa6.79□□□□□ -1.32
SF3A1-203ENST00000444440 LINC00242Q5T6M2 205 aa6.79□□□□□ -1.32
SF3A1-203ENST00000444440 ORAOV1Q8WV07 137 aa6.79□□□□□ -1.32
SF3A1-203ENST00000444440 A0A087WZ39 114 aa6.78□□□□□ -1.32
SF3A1-203ENST00000444440 A0A0J9YXV3 536 aa6.78□□□□□ -1.32
SF3A1-203ENST00000444440 LOC107984640A0A0U1RRK4 108 aa6.78□□□□□ -1.32
SF3A1-203ENST00000444440 UBE2D1P51668 147 aa6.78□□□□□ -1.32
SF3A1-203ENST00000444440 RAB5BP61020 215 aa6.78□□□□□ -1.32
SF3A1-203ENST00000444440 PRR3P79522 188 aaKnown RBP6.78□□□□□ -1.32
SF3A1-203ENST00000444440 SPAG11BQ08648 103 aa6.78□□□□□ -1.32
SF3A1-203ENST00000444440 LINC01561Q8N1V8 128 aa6.78□□□□□ -1.32
SF3A1-203ENST00000444440 A0A1W2PNN7 141 aa6.77□□□□□ -1.33
SF3A1-203ENST00000444440 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.77□□□□□ -1.33
SF3A1-203ENST00000444440 LINC00614P0C842 121 aa6.77□□□□□ -1.33
SF3A1-203ENST00000444440 PTTG1IPP53801 180 aa6.77□□□□□ -1.33
SF3A1-203ENST00000444440 RNF151Q2KHN1 245 aa6.77□□□□□ -1.33
SF3A1-203ENST00000444440 ZC2HC1BQ5TFG8 222 aa6.77□□□□□ -1.33
SF3A1-203ENST00000444440 GEMIN7Q9H840 131 aaKnown RBP6.77□□□□□ -1.33
SF3A1-203ENST00000444440 NDUFA1O15239 70 aa6.76□□□□□ -1.33
SF3A1-203ENST00000444440 HERVK_113P63121 156 aa6.76□□□□□ -1.33
SF3A1-203ENST00000444440 GAGE2BQ13066 116 aa6.76□□□□□ -1.33
SF3A1-203ENST00000444440 C10orf25Q5T742 122 aa6.76□□□□□ -1.33
SF3A1-203ENST00000444440 LINC00173Q6ZV60 143 aa6.76□□□□□ -1.33
SF3A1-203ENST00000444440 FAM19A3Q7Z5A8 133 aa6.76□□□□□ -1.33
SF3A1-203ENST00000444440 SLC7A5P1Q8MH63 180 aa6.76□□□□□ -1.33
SF3A1-203ENST00000444440 C7orf33Q8WU49 177 aa6.76□□□□□ -1.33
SF3A1-203ENST00000444440 ODF1Q14990 250 aa6.75□□□□□ -1.33
SF3A1-203ENST00000444440 C18orf32Q8TCD1 76 aa6.75□□□□□ -1.33
SF3A1-203ENST00000444440 MRPL35Q9NZE8 188 aaKnown RBP6.75□□□□□ -1.33
SF3A1-203ENST00000444440 PRSS2P07478 247 aa6.74□□□□□ -1.33
SF3A1-203ENST00000444440 PACRGQ96M98 296 aaPredicted RBP6.74□□□□□ -1.33
SF3A1-203ENST00000444440 RPL18AQ02543 176 aaKnown RBP6.73□□□□□ -1.33
SF3A1-203ENST00000444440 KIAA0087Q14695 138 aa6.73□□□□□ -1.33
SF3A1-203ENST00000444440 PMVKQ15126 192 aa6.73□□□□□ -1.33
SF3A1-203ENST00000444440 C6orf226Q5I0X4 101 aa6.73□□□□□ -1.33
SF3A1-203ENST00000444440 YPEL4Q96NS1 127 aa6.73□□□□□ -1.33
SF3A1-203ENST00000444440 CST9LQ9H4G1 147 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 210.2 ms