RNA–Protein interactions for RNA: ENST00000444315.6

TSPAN9-204, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-204ENST00000444315 LINC00474Q9P2X8 69 aa10.7□□□□□ -0.7
TSPAN9-204ENST00000444315 MRPS36P82909 103 aaKnown RBP10.69□□□□□ -0.7
TSPAN9-204ENST00000444315 TEX43Q6ZNM6 134 aa10.69□□□□□ -0.7
TSPAN9-204ENST00000444315 STPG4Q8N801 248 aa10.69□□□□□ -0.7
TSPAN9-204ENST00000444315 ORAOV1Q8WV07 137 aa10.69□□□□□ -0.7
TSPAN9-204ENST00000444315 TMEM141Q96I45 108 aa10.69□□□□□ -0.7
TSPAN9-204ENST00000444315 GAGE2BQ13066 116 aa10.68□□□□□ -0.7
TSPAN9-204ENST00000444315 KIAA1644Q3SXP7 199 aa10.68□□□□□ -0.7
TSPAN9-204ENST00000444315 NXT2Q9NPJ8 142 aaKnown RBP10.68□□□□□ -0.7
TSPAN9-204ENST00000444315 DMBT1Q9UGM3 2413 aaPredicted RBP10.68□□□□□ -0.7
TSPAN9-204ENST00000444315 TRAV9-1A0A075B6T8 112 aa10.67□□□□□ -0.7
TSPAN9-204ENST00000444315 A0A096LNI7 61 aa10.67□□□□□ -0.7
TSPAN9-204ENST00000444315 RPL18AQ02543 176 aaKnown RBP10.67□□□□□ -0.7
TSPAN9-204ENST00000444315 C2orf66Q6UXQ4 117 aa10.67□□□□□ -0.7
TSPAN9-204ENST00000444315 RPS10P5Q9NQ39 176 aa10.67□□□□□ -0.7
TSPAN9-204ENST00000444315 LOC107984640A0A0U1RRK4 108 aa10.66□□□□□ -0.7
TSPAN9-204ENST00000444315 G0S2P27469 103 aa10.66□□□□□ -0.7
TSPAN9-204ENST00000444315 CIRBPQ14011 172 aaKnown RBP10.66□□□□□ -0.7
TSPAN9-204ENST00000444315 Q6ZRU5 148 aa10.66□□□□□ -0.7
TSPAN9-204ENST00000444315 OR10D4PQ8NGN7 298 aa10.66□□□□□ -0.7
TSPAN9-204ENST00000444315 IGLV4-3A0A075B6K6 122 aa10.65□□□□□ -0.7
TSPAN9-204ENST00000444315 VCX2Q9H322 139 aa10.65□□□□□ -0.7
TSPAN9-204ENST00000444315 PYGO1Q9Y3Y4 419 aa10.65□□□□□ -0.7
TSPAN9-204ENST00000444315 PRSS47A8MTI9 375 aa10.64□□□□□ -0.71
TSPAN9-204ENST00000444315 K7EMI3 77 aa10.64□□□□□ -0.71
TSPAN9-204ENST00000444315 C2orf48Q96LS8 159 aa10.64□□□□□ -0.71
TSPAN9-204ENST00000444315 PLAC8Q9NZF1 115 aa10.64□□□□□ -0.71
TSPAN9-204ENST00000444315 NDUFA1O15239 70 aa10.63□□□□□ -0.71
TSPAN9-204ENST00000444315 RHEBQ15382 184 aa10.63□□□□□ -0.71
TSPAN9-204ENST00000444315 NDUFA5Q16718 116 aa10.63□□□□□ -0.71
TSPAN9-204ENST00000444315 PAPPA-AS1Q5QFB9 102 aa10.63□□□□□ -0.71
TSPAN9-204ENST00000444315 SMCO4Q9NRQ5 59 aa10.63□□□□□ -0.71
TSPAN9-204ENST00000444315 MYCBP2O75592 4640 aa10.62□□□□□ -0.71
TSPAN9-204ENST00000444315 COX19Q49B96 90 aa10.62□□□□□ -0.71
TSPAN9-204ENST00000444315 PRSS2P07478 247 aa10.61□□□□□ -0.71
TSPAN9-204ENST00000444315 FABP9Q0Z7S8 132 aa10.61□□□□□ -0.71
TSPAN9-204ENST00000444315 GNB1LQ9BYB4 327 aa10.61□□□□□ -0.71
TSPAN9-204ENST00000444315 IGHV3OR16-9A0A0B4J2B5 98 aa10.6□□□□□ -0.71
TSPAN9-204ENST00000444315 A0A0J9YXV3 536 aa10.6□□□□□ -0.71
TSPAN9-204ENST00000444315 PTTG1IPP53801 180 aa10.6□□□□□ -0.71
TSPAN9-204ENST00000444315 FA2HQ7L5A8 372 aa10.6□□□□□ -0.71
TSPAN9-204ENST00000444315 MT-ND6P03923 174 aa10.59□□□□□ -0.71
TSPAN9-204ENST00000444315 ZC2HC1BQ5TFG8 222 aa10.59□□□□□ -0.71
TSPAN9-204ENST00000444315 PACRGQ96M98 296 aaPredicted RBP10.59□□□□□ -0.71
TSPAN9-204ENST00000444315 MRPL18Q9H0U6 180 aaKnown RBP10.59□□□□□ -0.71
TSPAN9-204ENST00000444315 GEMIN7Q9H840 131 aaKnown RBP10.59□□□□□ -0.71
TSPAN9-204ENST00000444315 TOMM7Q9P0U1 55 aa10.59□□□□□ -0.71
TSPAN9-204ENST00000444315 KRTAP29-1A8MX34 341 aaPredicted RBP10.58□□□□□ -0.72
TSPAN9-204ENST00000444315 F8WDY8 70 aa10.58□□□□□ -0.72
TSPAN9-204ENST00000444315 APOC3P02656 99 aa10.58□□□□□ -0.72
TSPAN9-204ENST00000444315 KRTAP10-4P60372 401 aaPredicted RBP10.58□□□□□ -0.72
TSPAN9-204ENST00000444315 LINC00242Q5T6M2 205 aa10.58□□□□□ -0.72
TSPAN9-204ENST00000444315 FAM104AQ969W3 186 aa10.58□□□□□ -0.72
TSPAN9-204ENST00000444315 SCGB3A1Q96QR1 104 aa10.58□□□□□ -0.72
TSPAN9-204ENST00000444315 CARHSP1Q9Y2V2 147 aaKnown RBP10.58□□□□□ -0.72
TSPAN9-204ENST00000444315 A0A087WZ39 114 aa10.57□□□□□ -0.72
TSPAN9-204ENST00000444315 UBE2D1P51668 147 aa10.57□□□□□ -0.72
TSPAN9-204ENST00000444315 SEC11AP67812 179 aa10.57□□□□□ -0.72
TSPAN9-204ENST00000444315 OXTP01178 125 aa10.56□□□□□ -0.72
TSPAN9-204ENST00000444315 NPSP0C0P6 89 aa10.56□□□□□ -0.72
TSPAN9-204ENST00000444315 MRPL35Q9NZE8 188 aaKnown RBP10.56□□□□□ -0.72
TSPAN9-204ENST00000444315 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.55□□□□□ -0.72
TSPAN9-204ENST00000444315 SNAPINO95295 136 aa10.55□□□□□ -0.72
TSPAN9-204ENST00000444315 CKS1BP61024 79 aa10.55□□□□□ -0.72
TSPAN9-204ENST00000444315 RNF151Q2KHN1 245 aa10.55□□□□□ -0.72
TSPAN9-204ENST00000444315 TOMM6Q96B49 74 aa10.55□□□□□ -0.72
TSPAN9-204ENST00000444315 HNRNPA3P51991 378 aaKnown RBP10.54□□□□□ -0.72
TSPAN9-204ENST00000444315 HERVK_113P63121 156 aa10.54□□□□□ -0.72
TSPAN9-204ENST00000444315 GAGE2EQ4V326 116 aa10.54□□□□□ -0.72
TSPAN9-204ENST00000444315 C10orf91Q5T1B1 145 aa10.54□□□□□ -0.72
TSPAN9-204ENST00000444315 UNQ6190/PRO20217Q6UXQ8 127 aa10.54□□□□□ -0.72
TSPAN9-204ENST00000444315 SVBPQ8N300 66 aa10.54□□□□□ -0.72
TSPAN9-204ENST00000444315 AMELXQ99217 191 aa10.54□□□□□ -0.72
TSPAN9-204ENST00000444315 TIMM17AQ99595 171 aa10.54□□□□□ -0.72
TSPAN9-204ENST00000444315 ALKBH7Q9BT30 221 aaPredicted RBP10.54□□□□□ -0.72
TSPAN9-204ENST00000444315 GAGE2DQ9UEU5 116 aa10.54□□□□□ -0.72
TSPAN9-204ENST00000444315 TRAPPC1Q9Y5R8 145 aa10.54□□□□□ -0.72
TSPAN9-204ENST00000444315 HERC1Q15751 4861 aa10.53□□□□□ -0.72
TSPAN9-204ENST00000444315 LINC01549A6NIU2 74 aa10.53□□□□□ -0.72
TSPAN9-204ENST00000444315 IGIPA6NJ69 53 aa10.53□□□□□ -0.72
TSPAN9-204ENST00000444315 PRR3P79522 188 aaKnown RBP10.53□□□□□ -0.72
TSPAN9-204ENST00000444315 C9orf116Q5BN46 136 aaPredicted RBP10.52□□□□□ -0.73
TSPAN9-204ENST00000444315 C6orf226Q5I0X4 101 aa10.52□□□□□ -0.73
TSPAN9-204ENST00000444315 LINC00173Q6ZV60 143 aa10.52□□□□□ -0.73
TSPAN9-204ENST00000444315 ERASQ7Z444 233 aa10.52□□□□□ -0.73
TSPAN9-204ENST00000444315 LINC00469Q8N7U9 141 aa10.52□□□□□ -0.73
TSPAN9-204ENST00000444315 PKHD1L1Q86WI1 4243 aa10.51□□□□□ -0.73
TSPAN9-204ENST00000444315 NDUFA6P56556 154 aa10.51□□□□□ -0.73
TSPAN9-204ENST00000444315 C10orf25Q5T742 122 aa10.51□□□□□ -0.73
TSPAN9-204ENST00000444315 Q6ZRP5 223 aa10.51□□□□□ -0.73
TSPAN9-204ENST00000444315 C6orf48Q9UBA6 75 aa10.51□□□□□ -0.73
TSPAN9-204ENST00000444315 TRBV30A0A0K0K1B3 111 aa10.5□□□□□ -0.73
TSPAN9-204ENST00000444315 C2orf82Q6UX34 121 aa10.5□□□□□ -0.73
TSPAN9-204ENST00000444315 FAM19A5Q7Z5A7 132 aaPredicted RBP10.5□□□□□ -0.73
TSPAN9-204ENST00000444315 LINC01561Q8N1V8 128 aa10.5□□□□□ -0.73
TSPAN9-204ENST00000444315 A0A1W2PNN7 141 aa10.49□□□□□ -0.73
TSPAN9-204ENST00000444315 CDKN2A-AS1Q9UH64 79 aa10.48□□□□□ -0.73
TSPAN9-204ENST00000444315 PHF5AQ7RTV0 110 aaKnown RBP10.47□□□□□ -0.73
TSPAN9-204ENST00000444315 UBE2BP63146 152 aa10.46□□□□□ -0.73
TSPAN9-204ENST00000444315 KIAA0087Q14695 138 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms