RNA–Protein interactions for RNA: ENST00000443574.1

HLA-DQB1-206, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-206ENST00000443574 NPSP0C0P6 89 aa6.72□□□□□ -1.33
HLA-DQB1-206ENST00000443574 HIGD2BQ4VC39 106 aa6.72□□□□□ -1.33
HLA-DQB1-206ENST00000443574 TEX43Q6ZNM6 134 aa6.72□□□□□ -1.33
HLA-DQB1-206ENST00000443574 Q6ZSA8 131 aa6.72□□□□□ -1.33
HLA-DQB1-206ENST00000443574 XGP55808 180 aa6.71□□□□□ -1.34
HLA-DQB1-206ENST00000443574 FA2HQ7L5A8 372 aa6.71□□□□□ -1.34
HLA-DQB1-206ENST00000443574 ALKBH7Q9BT30 221 aaPredicted RBP6.71□□□□□ -1.34
HLA-DQB1-206ENST00000443574 TRAPPC1Q9Y5R8 145 aa6.71□□□□□ -1.34
HLA-DQB1-206ENST00000443574 DNAH8Q96JB1 4490 aa6.71□□□□□ -1.34
HLA-DQB1-206ENST00000443574 IGLV4-3A0A075B6K6 122 aa6.7□□□□□ -1.34
HLA-DQB1-206ENST00000443574 CHAC1Q9BUX1 264 aa6.7□□□□□ -1.34
HLA-DQB1-206ENST00000443574 HAMPP81172 84 aa6.69□□□□□ -1.34
HLA-DQB1-206ENST00000443574 Q5VSD8 79 aa6.69□□□□□ -1.34
HLA-DQB1-206ENST00000443574 SCXQ7RTU7 201 aa6.69□□□□□ -1.34
HLA-DQB1-206ENST00000443574 OR10D4PQ8NGN7 298 aa6.69□□□□□ -1.34
HLA-DQB1-206ENST00000443574 CARD19Q96LW7 228 aa6.69□□□□□ -1.34
HLA-DQB1-206ENST00000443574 TIMM17AQ99595 171 aa6.69□□□□□ -1.34
HLA-DQB1-206ENST00000443574 OPRPNQ99935 248 aaPredicted RBP6.69□□□□□ -1.34
HLA-DQB1-206ENST00000443574 VCX2Q9H322 139 aa6.69□□□□□ -1.34
HLA-DQB1-206ENST00000443574 FAM30AQ9NZY2 134 aa6.69□□□□□ -1.34
HLA-DQB1-206ENST00000443574 SEC11AP67812 179 aa6.68□□□□□ -1.34
HLA-DQB1-206ENST00000443574 C5orf38Q86SI9 138 aa6.68□□□□□ -1.34
HLA-DQB1-206ENST00000443574 TOMM6Q96B49 74 aa6.68□□□□□ -1.34
HLA-DQB1-206ENST00000443574 SMR3BP02814 79 aaPredicted RBP6.67□□□□□ -1.34
HLA-DQB1-206ENST00000443574 RAB5BP61020 215 aa6.67□□□□□ -1.34
HLA-DQB1-206ENST00000443574 SPAG11BQ08648 103 aa6.67□□□□□ -1.34
HLA-DQB1-206ENST00000443574 SYCNQ0VAF6 134 aa6.67□□□□□ -1.34
HLA-DQB1-206ENST00000443574 ERASQ7Z444 233 aa6.67□□□□□ -1.34
HLA-DQB1-206ENST00000443574 SCGB3A1Q96QR1 104 aa6.67□□□□□ -1.34
HLA-DQB1-206ENST00000443574 CAMK2N2Q96S95 79 aa6.67□□□□□ -1.34
HLA-DQB1-206ENST00000443574 IGHV3OR16-9A0A0B4J2B5 98 aa6.66□□□□□ -1.34
HLA-DQB1-206ENST00000443574 LINC01546A6NGU7 62 aa6.66□□□□□ -1.34
HLA-DQB1-206ENST00000443574 IGIPA6NJ69 53 aa6.66□□□□□ -1.34
HLA-DQB1-206ENST00000443574 PLA2G1BP04054 148 aaKnown RBP6.66□□□□□ -1.34
HLA-DQB1-206ENST00000443574 HERVK_113P63121 156 aa6.66□□□□□ -1.34
HLA-DQB1-206ENST00000443574 C18orf32Q8TCD1 76 aa6.66□□□□□ -1.34
HLA-DQB1-206ENST00000443574 ORAOV1Q8WV07 137 aa6.66□□□□□ -1.34
HLA-DQB1-206ENST00000443574 C2orf48Q96LS8 159 aa6.66□□□□□ -1.34
HLA-DQB1-206ENST00000443574 AMELXQ99217 191 aa6.66□□□□□ -1.34
HLA-DQB1-206ENST00000443574 LINC00474Q9P2X8 69 aa6.66□□□□□ -1.34
HLA-DQB1-206ENST00000443574 IGLV4-69A0A075B6H9 119 aa6.65□□□□□ -1.34
HLA-DQB1-206ENST00000443574 F8WDY8 70 aa6.65□□□□□ -1.34
HLA-DQB1-206ENST00000443574 SLPIP03973 132 aa6.65□□□□□ -1.34
HLA-DQB1-206ENST00000443574 UBE2D1P51668 147 aa6.65□□□□□ -1.34
HLA-DQB1-206ENST00000443574 LINC00242Q5T6M2 205 aa6.65□□□□□ -1.34
HLA-DQB1-206ENST00000443574 SDIM1Q6ZPB5 146 aa6.65□□□□□ -1.34
HLA-DQB1-206ENST00000443574 SLC7A5P1Q8MH63 180 aa6.65□□□□□ -1.34
HLA-DQB1-206ENST00000443574 CIRBP-AS1Q8TBR5 109 aa6.65□□□□□ -1.34
HLA-DQB1-206ENST00000443574 FAM104AQ969W3 186 aa6.65□□□□□ -1.34
HLA-DQB1-206ENST00000443574 DPH3Q96FX2 82 aa6.65□□□□□ -1.34
HLA-DQB1-206ENST00000443574 PACRGQ96M98 296 aaPredicted RBP6.65□□□□□ -1.34
HLA-DQB1-206ENST00000443574 GEMIN7Q9H840 131 aaKnown RBP6.65□□□□□ -1.34
HLA-DQB1-206ENST00000443574 A0A087WZ39 114 aa6.64□□□□□ -1.35
HLA-DQB1-206ENST00000443574 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.64□□□□□ -1.35
HLA-DQB1-206ENST00000443574 NDUFA1O15239 70 aa6.64□□□□□ -1.35
HLA-DQB1-206ENST00000443574 COX6A2Q02221 97 aa6.64□□□□□ -1.35
HLA-DQB1-206ENST00000443574 LINC00173Q6ZV60 143 aa6.64□□□□□ -1.35
HLA-DQB1-206ENST00000443574 CBLN2Q8IUK8 224 aa6.64□□□□□ -1.35
HLA-DQB1-206ENST00000443574 LINC01561Q8N1V8 128 aa6.64□□□□□ -1.35
HLA-DQB1-206ENST00000443574 LINC00526Q96FQ7 95 aa6.64□□□□□ -1.35
HLA-DQB1-206ENST00000443574 PCLOQ9Y6V0 5065 aa6.63□□□□□ -1.35
HLA-DQB1-206ENST00000443574 IGKV2-24A0A0C4DH68 120 aa6.63□□□□□ -1.35
HLA-DQB1-206ENST00000443574 LOC107984640A0A0U1RRK4 108 aa6.63□□□□□ -1.35
HLA-DQB1-206ENST00000443574 HBDP02042 147 aa6.63□□□□□ -1.35
HLA-DQB1-206ENST00000443574 LINC00614P0C842 121 aa6.63□□□□□ -1.35
HLA-DQB1-206ENST00000443574 CIRBPQ14011 172 aaKnown RBP6.63□□□□□ -1.35
HLA-DQB1-206ENST00000443574 FAM19A3Q7Z5A8 133 aa6.63□□□□□ -1.35
HLA-DQB1-206ENST00000443574 SPACA4Q8TDM5 124 aa6.63□□□□□ -1.35
HLA-DQB1-206ENST00000443574 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.63□□□□□ -1.35
HLA-DQB1-206ENST00000443574 PRSS2P07478 247 aa6.62□□□□□ -1.35
HLA-DQB1-206ENST00000443574 Q6ZRU5 148 aa6.62□□□□□ -1.35
HLA-DQB1-206ENST00000443574 YPEL4Q96NS1 127 aa6.62□□□□□ -1.35
HLA-DQB1-206ENST00000443574 ABCA13Q86UQ4 5058 aa6.62□□□□□ -1.35
HLA-DQB1-206ENST00000443574 FAT1Q14517 4588 aa6.62□□□□□ -1.35
HLA-DQB1-206ENST00000443574 ATP5LO75964 103 aa6.61□□□□□ -1.35
HLA-DQB1-206ENST00000443574 CHTF8P0CG12 524 aa6.61□□□□□ -1.35
HLA-DQB1-206ENST00000443574 PMVKQ15126 192 aa6.61□□□□□ -1.35
HLA-DQB1-206ENST00000443574 RNF151Q2KHN1 245 aa6.61□□□□□ -1.35
HLA-DQB1-206ENST00000443574 MAJINQ3KP22 176 aa6.61□□□□□ -1.35
HLA-DQB1-206ENST00000443574 ZC2HC1BQ5TFG8 222 aa6.61□□□□□ -1.35
HLA-DQB1-206ENST00000443574 LINC00469Q8N7U9 141 aa6.61□□□□□ -1.35
HLA-DQB1-206ENST00000443574 KRTAP4-5Q9BYR2 181 aa6.61□□□□□ -1.35
HLA-DQB1-206ENST00000443574 MRPL35Q9NZE8 188 aaKnown RBP6.61□□□□□ -1.35
HLA-DQB1-206ENST00000443574 A0A087WYN8 130 aa6.6□□□□□ -1.35
HLA-DQB1-206ENST00000443574 A0A096LNI7 61 aa6.6□□□□□ -1.35
HLA-DQB1-206ENST00000443574 TINCRA0A1B0GVN0 87 aa6.6□□□□□ -1.35
HLA-DQB1-206ENST00000443574 INAFM2P0DMQ5 153 aa6.6□□□□□ -1.35
HLA-DQB1-206ENST00000443574 RPL18AQ02543 176 aaKnown RBP6.6□□□□□ -1.35
HLA-DQB1-206ENST00000443574 C7orf33Q8WU49 177 aa6.6□□□□□ -1.35
HLA-DQB1-206ENST00000443574 CHCHD1Q96BP2 118 aaKnown RBP6.6□□□□□ -1.35
HLA-DQB1-206ENST00000443574 VPS13BQ7Z7G8 4022 aa6.6□□□□□ -1.35
HLA-DQB1-206ENST00000443574 SRRM2Q9UQ35 2752 aaKnown RBP6.6□□□□□ -1.35
HLA-DQB1-206ENST00000443574 TRBV30A0A0K0K1B3 111 aa6.59□□□□□ -1.35
HLA-DQB1-206ENST00000443574 H3BRM9 83 aa6.59□□□□□ -1.35
HLA-DQB1-206ENST00000443574 PANO1I0J062 215 aa6.59□□□□□ -1.35
HLA-DQB1-206ENST00000443574 HSBP1O75506 76 aa6.59□□□□□ -1.35
HLA-DQB1-206ENST00000443574 CKS1BP61024 79 aa6.59□□□□□ -1.35
HLA-DQB1-206ENST00000443574 RPL37AP61513 92 aaKnown RBP6.59□□□□□ -1.35
HLA-DQB1-206ENST00000443574 BAGE3Q86Y29 109 aa6.59□□□□□ -1.35
HLA-DQB1-206ENST00000443574 Q8IZM0 81 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms