RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 APCSP02743 223 aa8.27□□□□□ -1.09
LINC00642-202ENST00000442515 ZNF25P17030 456 aaPredicted RBP8.27□□□□□ -1.09
LINC00642-202ENST00000442515 FOXA3P55318 350 aaPredicted RBP8.27□□□□□ -1.09
LINC00642-202ENST00000442515 CD164L2Q6UWJ8 174 aa8.27□□□□□ -1.09
LINC00642-202ENST00000442515 CAMK2N2Q96S95 79 aa8.27□□□□□ -1.09
LINC00642-202ENST00000442515 HIGD1CA8MV81 97 aa8.26□□□□□ -1.09
LINC00642-202ENST00000442515 NCR2O95944 276 aa8.26□□□□□ -1.09
LINC00642-202ENST00000442515 TRGC1P0CF51 173 aa8.26□□□□□ -1.09
LINC00642-202ENST00000442515 RAB5BP61020 215 aa8.26□□□□□ -1.09
LINC00642-202ENST00000442515 A0A1B0GW15 77 aa8.24□□□□□ -1.09
LINC00642-202ENST00000442515 FAM168BA1KXE4 195 aa8.24□□□□□ -1.09
LINC00642-202ENST00000442515 SS18Q15532 418 aa8.24□□□□□ -1.09
LINC00642-202ENST00000442515 TMEM101Q96IK0 257 aa8.24□□□□□ -1.09
LINC00642-202ENST00000442515 OPRPNQ99935 248 aaPredicted RBP8.24□□□□□ -1.09
LINC00642-202ENST00000442515 GNB1LQ9BYB4 327 aa8.24□□□□□ -1.09
LINC00642-202ENST00000442515 A0A1B0GXF2 115 aa8.23□□□□□ -1.09
LINC00642-202ENST00000442515 S100A8P05109 93 aa8.23□□□□□ -1.09
LINC00642-202ENST00000442515 MALP21145 153 aa8.23□□□□□ -1.09
LINC00642-202ENST00000442515 CTRLP40313 264 aa8.23□□□□□ -1.09
LINC00642-202ENST00000442515 GATD1Q8NB37 220 aa8.23□□□□□ -1.09
LINC00642-202ENST00000442515 BORCS7Q96B45 105 aa8.23□□□□□ -1.09
LINC00642-202ENST00000442515 RPL39LQ96EH5 51 aaKnown RBP8.23□□□□□ -1.09
LINC00642-202ENST00000442515 TRGC2P03986 189 aa8.22□□□□□ -1.09
LINC00642-202ENST00000442515 HBBP68871 147 aa8.22□□□□□ -1.09
LINC00642-202ENST00000442515 C2orf48Q96LS8 159 aa8.22□□□□□ -1.09
LINC00642-202ENST00000442515 TRAPPC1Q9Y5R8 145 aa8.22□□□□□ -1.09
LINC00642-202ENST00000442515 A0A1B0GUT8 65 aa8.21□□□□□ -1.1
LINC00642-202ENST00000442515 F2Z2F3 143 aa8.21□□□□□ -1.1
LINC00642-202ENST00000442515 COX7A2LO14548 114 aa8.21□□□□□ -1.1
LINC00642-202ENST00000442515 RIGQ13278 110 aa8.21□□□□□ -1.1
LINC00642-202ENST00000442515 MRPL54Q6P161 138 aaKnown RBP8.21□□□□□ -1.1
LINC00642-202ENST00000442515 LYZL1Q6UWQ5 148 aa8.21□□□□□ -1.1
LINC00642-202ENST00000442515 TMEM136Q6ZRR5 245 aa8.21□□□□□ -1.1
LINC00642-202ENST00000442515 FAM19A5Q7Z5A7 132 aaPredicted RBP8.21□□□□□ -1.1
LINC00642-202ENST00000442515 CNFNQ9BYD5 112 aa8.21□□□□□ -1.1
LINC00642-202ENST00000442515 CDIP1Q9H305 208 aa8.21□□□□□ -1.1
LINC00642-202ENST00000442515 CDC42SE2Q9NRR3 84 aa8.2□□□□□ -1.1
LINC00642-202ENST00000442515 SDHAF1A6NFY7 115 aa8.19□□□□□ -1.1
LINC00642-202ENST00000442515 HIST1H2BKO60814 126 aa8.19□□□□□ -1.1
LINC00642-202ENST00000442515 HIST1H2BJP06899 126 aa8.19□□□□□ -1.1
LINC00642-202ENST00000442515 ESDP10768 282 aa8.19□□□□□ -1.1
LINC00642-202ENST00000442515 HIST1H2BOP23527 126 aa8.19□□□□□ -1.1
LINC00642-202ENST00000442515 HIST1H2BBP33778 126 aa8.19□□□□□ -1.1
LINC00642-202ENST00000442515 HIST1H2BDP58876 126 aa8.19□□□□□ -1.1
LINC00642-202ENST00000442515 HIST1H2BCP62807 126 aa8.19□□□□□ -1.1
LINC00642-202ENST00000442515 FABP9Q0Z7S8 132 aa8.19□□□□□ -1.1
LINC00642-202ENST00000442515 HIST2H2BEQ16778 126 aa8.19□□□□□ -1.1
LINC00642-202ENST00000442515 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.19□□□□□ -1.1
LINC00642-202ENST00000442515 HIST1H2BHQ93079 126 aa8.19□□□□□ -1.1
LINC00642-202ENST00000442515 HIST1H2BNQ99877 126 aa8.19□□□□□ -1.1
LINC00642-202ENST00000442515 HIST1H2BMQ99879 126 aa8.19□□□□□ -1.1
LINC00642-202ENST00000442515 MRPL18Q9H0U6 180 aaKnown RBP8.19□□□□□ -1.1
LINC00642-202ENST00000442515 UBE2BP63146 152 aa8.18□□□□□ -1.1
LINC00642-202ENST00000442515 SPAG11BQ08648 103 aa8.18□□□□□ -1.1
LINC00642-202ENST00000442515 RNF151Q2KHN1 245 aa8.18□□□□□ -1.1
LINC00642-202ENST00000442515 RETNLBQ9BQ08 111 aa8.18□□□□□ -1.1
LINC00642-202ENST00000442515 M0QXV9 152 aa8.17□□□□□ -1.1
LINC00642-202ENST00000442515 S100A6P06703 90 aa8.17□□□□□ -1.1
LINC00642-202ENST00000442515 TPRXLQ17RH7 258 aa8.17□□□□□ -1.1
LINC00642-202ENST00000442515 KRTAP7-1Q8IUC3 87 aa8.17□□□□□ -1.1
LINC00642-202ENST00000442515 MRAP2Q96G30 205 aa8.17□□□□□ -1.1
LINC00642-202ENST00000442515 A0A087X002 238 aa8.16□□□□□ -1.1
LINC00642-202ENST00000442515 I3L3M4 83 aa8.16□□□□□ -1.1
LINC00642-202ENST00000442515 TWIST1Q15672 202 aa8.16□□□□□ -1.1
LINC00642-202ENST00000442515 MRPL52Q86TS9 123 aaKnown RBP8.16□□□□□ -1.1
LINC00642-202ENST00000442515 MRPL35Q9NZE8 188 aaKnown RBP8.16□□□□□ -1.1
LINC00642-202ENST00000442515 ZNF861PO60384 105 aa8.15□□□□□ -1.1
LINC00642-202ENST00000442515 TSHBP01222 138 aa8.15□□□□□ -1.1
LINC00642-202ENST00000442515 PMCHP20382 165 aa8.15□□□□□ -1.1
LINC00642-202ENST00000442515 LINC01547P58512 204 aaPredicted RBP8.15□□□□□ -1.1
LINC00642-202ENST00000442515 COA6Q5JTJ3 125 aaKnown RBP8.15□□□□□ -1.1
LINC00642-202ENST00000442515 C5orf38Q86SI9 138 aa8.15□□□□□ -1.1
LINC00642-202ENST00000442515 C5orf52A6NGY3 159 aa8.14□□□□□ -1.11
LINC00642-202ENST00000442515 LOC105371267A0A1B0GV96 52 aa8.13□□□□□ -1.11
LINC00642-202ENST00000442515 TLX1NBP0CAT3 122 aa8.13□□□□□ -1.11
LINC00642-202ENST00000442515 GAGE2EQ4V326 116 aa8.13□□□□□ -1.11
LINC00642-202ENST00000442515 TYMSOSQ8TAI1 123 aa8.13□□□□□ -1.11
LINC00642-202ENST00000442515 TMEM191AQ9H0A3 160 aa8.13□□□□□ -1.11
LINC00642-202ENST00000442515 GAGE2DQ9UEU5 116 aa8.13□□□□□ -1.11
LINC00642-202ENST00000442515 TRAV13-1A0A0B4J241 112 aa8.12□□□□□ -1.11
LINC00642-202ENST00000442515 NDUFA6P56556 154 aa8.12□□□□□ -1.11
LINC00642-202ENST00000442515 SNRPEP62304 92 aaKnown RBP8.12□□□□□ -1.11
LINC00642-202ENST00000442515 RNASE13Q5GAN3 156 aaKnown RBP8.12□□□□□ -1.11
LINC00642-202ENST00000442515 C10orf25Q5T742 122 aa8.12□□□□□ -1.11
LINC00642-202ENST00000442515 SMIM15Q7Z3B0 74 aa8.12□□□□□ -1.11
LINC00642-202ENST00000442515 OR10D4PQ8NGN7 298 aa8.12□□□□□ -1.11
LINC00642-202ENST00000442515 IGLV7-46A0A075B6I9 117 aa8.11□□□□□ -1.11
LINC00642-202ENST00000442515 TRBV6-5A0A0K0K1A5 114 aa8.11□□□□□ -1.11
LINC00642-202ENST00000442515 NDUFA1O15239 70 aa8.11□□□□□ -1.11
LINC00642-202ENST00000442515 FAM104BQ5XKR9 115 aa8.11□□□□□ -1.11
LINC00642-202ENST00000442515 ALKBH7Q9BT30 221 aaPredicted RBP8.11□□□□□ -1.11
LINC00642-202ENST00000442515 C6orf48Q9UBA6 75 aa8.11□□□□□ -1.11
LINC00642-202ENST00000442515 CRYGAP11844 174 aa8.1□□□□□ -1.11
LINC00642-202ENST00000442515 KIAA1644Q3SXP7 199 aa8.1□□□□□ -1.11
LINC00642-202ENST00000442515 ORAOV1Q8WV07 137 aa8.1□□□□□ -1.11
LINC00642-202ENST00000442515 PPBPP02775 128 aa8.09□□□□□ -1.11
LINC00642-202ENST00000442515 LAMTOR2Q9Y2Q5 125 aa8.09□□□□□ -1.11
LINC00642-202ENST00000442515 F8WDY8 70 aa8.08□□□□□ -1.12
LINC00642-202ENST00000442515 UNQ6190/PRO20217Q6UXQ8 127 aa8.08□□□□□ -1.12
LINC00642-202ENST00000442515 AMN1Q8IY45 258 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms