RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 PCDH15Q96QU1 1955 aa3.22□□□□□ -1.89
HMGB3P9-201ENST00000441799 C2CD3Q4AC94 2353 aa3.22□□□□□ -1.89
HMGB3P9-201ENST00000441799 A0A087WVE0 104 aa3.22□□□□□ -1.89
HMGB3P9-201ENST00000441799 TRBV6-8A0A0A6YYG3 113 aa3.22□□□□□ -1.89
HMGB3P9-201ENST00000441799 IGHV3-74A0A0B4J1X5 117 aa3.22□□□□□ -1.89
HMGB3P9-201ENST00000441799 IGHV3-43A0A0B4J1X8 118 aa3.22□□□□□ -1.89
HMGB3P9-201ENST00000441799 TRAV12-1A0A0B4J245 112 aa3.22□□□□□ -1.89
HMGB3P9-201ENST00000441799 LOC101927531A0A1B0GV80 90 aa3.22□□□□□ -1.89
HMGB3P9-201ENST00000441799 C11orf86A6NJI1 115 aa3.22□□□□□ -1.89
HMGB3P9-201ENST00000441799 SRRM5B3KS81 715 aa3.22□□□□□ -1.89
HMGB3P9-201ENST00000441799 B4DSR2 109 aa3.22□□□□□ -1.89
HMGB3P9-201ENST00000441799 KRTAP4-16G5E9R7 235 aaPredicted RBP3.22□□□□□ -1.89
HMGB3P9-201ENST00000441799 MRPL33O75394 65 aaKnown RBP3.22□□□□□ -1.89
HMGB3P9-201ENST00000441799 IGHV3-30-3P0DP02 117 aa3.22□□□□□ -1.89
HMGB3P9-201ENST00000441799 COX7A1P24310 79 aa3.22□□□□□ -1.89
HMGB3P9-201ENST00000441799 RPL28P46779 137 aaKnown RBP3.22□□□□□ -1.89
HMGB3P9-201ENST00000441799 DSCR9P59020 149 aa3.22□□□□□ -1.89
HMGB3P9-201ENST00000441799 KRTAP10-12P60413 245 aa3.22□□□□□ -1.89
HMGB3P9-201ENST00000441799 EGFEM1PQ0D2K5 195 aa3.22□□□□□ -1.89
HMGB3P9-201ENST00000441799 MOBPQ13875 183 aa3.22□□□□□ -1.89
HMGB3P9-201ENST00000441799 PIGYQ3MUY2 71 aa3.22□□□□□ -1.89
HMGB3P9-201ENST00000441799 SFTA2Q6UW10 78 aa3.22□□□□□ -1.89
HMGB3P9-201ENST00000441799 Q8IYB0 196 aa3.22□□□□□ -1.89
HMGB3P9-201ENST00000441799 CDC42SE2Q9NRR3 84 aa3.22□□□□□ -1.89
HMGB3P9-201ENST00000441799 ALPK2Q86TB3 2170 aa3.22□□□□□ -1.89
HMGB3P9-201ENST00000441799 CREBBPQ92793 2442 aa3.22□□□□□ -1.89
HMGB3P9-201ENST00000441799 PCNX2A6NKB5 2137 aa3.22□□□□□ -1.89
HMGB3P9-201ENST00000441799 USP9YO00507 2555 aaPredicted RBP3.21□□□□□ -1.9
HMGB3P9-201ENST00000441799 IGHV5-10-1A0A0J9YXX1 117 aa3.21□□□□□ -1.9
HMGB3P9-201ENST00000441799 HIGD1CA8MV81 97 aa3.21□□□□□ -1.9
HMGB3P9-201ENST00000441799 C10orf142B7Z368 130 aa3.21□□□□□ -1.9
HMGB3P9-201ENST00000441799 CHKB-CPT1BH3BT56 60 aa3.21□□□□□ -1.9
HMGB3P9-201ENST00000441799 IGLV3-1P01715 115 aa3.21□□□□□ -1.9
HMGB3P9-201ENST00000441799 COX6B1P14854 86 aa3.21□□□□□ -1.9
HMGB3P9-201ENST00000441799 CASC10Q5T4H9 136 aa3.21□□□□□ -1.9
HMGB3P9-201ENST00000441799 POLQO75417 2590 aa3.21□□□□□ -1.9
HMGB3P9-201ENST00000441799 DSCAML1Q8TD84 2053 aa3.21□□□□□ -1.9
HMGB3P9-201ENST00000441799 SEC16AO15027 2179 aa3.21□□□□□ -1.9
HMGB3P9-201ENST00000441799 CELSR2Q9HCU4 2923 aa3.2□□□□□ -1.9
HMGB3P9-201ENST00000441799 SPAG17Q6Q759 2223 aa3.2□□□□□ -1.9
HMGB3P9-201ENST00000441799 KNL1Q8NG31 2342 aa3.2□□□□□ -1.9
HMGB3P9-201ENST00000441799 PTPRQQ9UMZ3 2332 aa3.2□□□□□ -1.9
HMGB3P9-201ENST00000441799 RP1P56715 2156 aa3.2□□□□□ -1.9
HMGB3P9-201ENST00000441799 IGKV3D-7A0A0C4DH55 119 aa3.2□□□□□ -1.9
HMGB3P9-201ENST00000441799 A0A0J9YY99 117 aa3.2□□□□□ -1.9
HMGB3P9-201ENST00000441799 A8MU10 97 aa3.2□□□□□ -1.9
HMGB3P9-201ENST00000441799 PSCAO43653 123 aa3.2□□□□□ -1.9
HMGB3P9-201ENST00000441799 IGLV2-11P01706 119 aa3.2□□□□□ -1.9
HMGB3P9-201ENST00000441799 IGHV3-13P01766 116 aa3.2□□□□□ -1.9
HMGB3P9-201ENST00000441799 CGB3P0DN86 165 aa3.2□□□□□ -1.9
HMGB3P9-201ENST00000441799 CGB7P0DN87 165 aa3.2□□□□□ -1.9
HMGB3P9-201ENST00000441799 IAPPP10997 89 aa3.2□□□□□ -1.9
HMGB3P9-201ENST00000441799 ROMO1P60602 79 aa3.2□□□□□ -1.9
HMGB3P9-201ENST00000441799 PRR4Q16378 134 aa3.2□□□□□ -1.9
HMGB3P9-201ENST00000441799 CASC2Q6XLA1 102 aa3.2□□□□□ -1.9
HMGB3P9-201ENST00000441799 C20orf203Q8NBC4 194 aa3.2□□□□□ -1.9
HMGB3P9-201ENST00000441799 OBSCN-AS1Q96MR7 158 aa3.2□□□□□ -1.9
HMGB3P9-201ENST00000441799 DPM3Q9P2X0 92 aa3.2□□□□□ -1.9
HMGB3P9-201ENST00000441799 PDZD2O15018 2839 aa3.2□□□□□ -1.9
HMGB3P9-201ENST00000441799 ADAMTS9Q9P2N4 1935 aa3.2□□□□□ -1.9
HMGB3P9-201ENST00000441799 GON4LQ3T8J9 2241 aa3.2□□□□□ -1.9
HMGB3P9-201ENST00000441799 UNC13CQ8NB66 2214 aa3.2□□□□□ -1.9
HMGB3P9-201ENST00000441799 CELSR1Q9NYQ6 3014 aa3.19□□□□□ -1.9
HMGB3P9-201ENST00000441799 IGLV5-52A0A0A0MRZ9 124 aa3.19□□□□□ -1.9
HMGB3P9-201ENST00000441799 DNAL4O96015 105 aa3.19□□□□□ -1.9
HMGB3P9-201ENST00000441799 IGHV3-11P01762 117 aa3.19□□□□□ -1.9
HMGB3P9-201ENST00000441799 TRGV3P03979 118 aa3.19□□□□□ -1.9
HMGB3P9-201ENST00000441799 ARMS2P0C7Q2 107 aa3.19□□□□□ -1.9
HMGB3P9-201ENST00000441799 FXYD3Q14802 87 aa3.19□□□□□ -1.9
HMGB3P9-201ENST00000441799 MIAQ16674 131 aa3.19□□□□□ -1.9
HMGB3P9-201ENST00000441799 KRTAP21-3Q3LHN1 58 aa3.19□□□□□ -1.9
HMGB3P9-201ENST00000441799 KRTAP24-1Q3LI83 254 aa3.19□□□□□ -1.9
HMGB3P9-201ENST00000441799 SPANXN5Q5MJ07 72 aa3.19□□□□□ -1.9
HMGB3P9-201ENST00000441799 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
HMGB3P9-201ENST00000441799 CNEP1R1Q8N9A8 125 aa3.19□□□□□ -1.9
HMGB3P9-201ENST00000441799 Q8NDZ9 215 aa3.19□□□□□ -1.9
HMGB3P9-201ENST00000441799 UBALD1Q8TB05 177 aa3.19□□□□□ -1.9
HMGB3P9-201ENST00000441799 TMEM254Q8TBM7 123 aa3.19□□□□□ -1.9
HMGB3P9-201ENST00000441799 IMMP1LQ96LU5 166 aa3.19□□□□□ -1.9
HMGB3P9-201ENST00000441799 FGF23Q9GZV9 251 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P9-201ENST00000441799 TMEM167BQ9NRX6 74 aa3.19□□□□□ -1.9
HMGB3P9-201ENST00000441799 SNURFQ9Y675 71 aa3.19□□□□□ -1.9
HMGB3P9-201ENST00000441799 ICOSQ9Y6W8 199 aa3.19□□□□□ -1.9
HMGB3P9-201ENST00000441799 KIF25-AS1Q9Y6Z4 181 aa3.19□□□□□ -1.9
HMGB3P9-201ENST00000441799 ACACAQ13085 2346 aa3.19□□□□□ -1.9
HMGB3P9-201ENST00000441799 ADGRG4Q8IZF6 3080 aa3.18□□□□□ -1.9
HMGB3P9-201ENST00000441799 ARID1AO14497 2285 aa3.18□□□□□ -1.9
HMGB3P9-201ENST00000441799 TRAV23DV6A0A075B6W5 121 aa3.18□□□□□ -1.9
HMGB3P9-201ENST00000441799 TRBV6-6A0A0A6YYG2 114 aa3.18□□□□□ -1.9
HMGB3P9-201ENST00000441799 F8VRH5 84 aa3.18□□□□□ -1.9
HMGB3P9-201ENST00000441799 SOCS3O14543 225 aa3.18□□□□□ -1.9
HMGB3P9-201ENST00000441799 IGHV1-69P01742 117 aa3.18□□□□□ -1.9
HMGB3P9-201ENST00000441799 PATE4P0C8F1 98 aa3.18□□□□□ -1.9
HMGB3P9-201ENST00000441799 REG3GQ6UW15 175 aa3.18□□□□□ -1.9
HMGB3P9-201ENST00000441799 LYPD2Q6UXB3 125 aa3.18□□□□□ -1.9
HMGB3P9-201ENST00000441799 ZNF355PQ9NSJ1 428 aa3.18□□□□□ -1.9
HMGB3P9-201ENST00000441799 S4R3C0 116 aa3.18□□□□□ -1.9
HMGB3P9-201ENST00000441799 NIPBLQ6KC79 2804 aaeCLIP3.18□□□□□ -1.9
HMGB3P9-201ENST00000441799 CACNA1EQ15878 2313 aa3.18□□□□□ -1.9
HMGB3P9-201ENST00000441799 PCNX3Q9H6A9 2034 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms