RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 MALP21145 153 aa12.16□□□□□ -0.46
PMS1-213ENST00000441310 PRIMA1Q86XR5 153 aa12.16□□□□□ -0.46
PMS1-213ENST00000441310 USMG5Q96IX5 58 aa12.16□□□□□ -0.46
PMS1-213ENST00000441310 Q9UF83 564 aa12.16□□□□□ -0.46
PMS1-213ENST00000441310 NDUFA4O00483 81 aa12.16□□□□□ -0.46
PMS1-213ENST00000441310 SYNJ2BPP57105 145 aa12.16□□□□□ -0.46
PMS1-213ENST00000441310 NDUFA1O15239 70 aa12.16□□□□□ -0.46
PMS1-213ENST00000441310 C9orf129Q5T035 196 aaKnown RBP12.16□□□□□ -0.46
PMS1-213ENST00000441310 USP17L23D6RBM5 183 aa12.15□□□□□ -0.47
PMS1-213ENST00000441310 IGLV1-40P01703 118 aa12.15□□□□□ -0.47
PMS1-213ENST00000441310 Q96MF0 132 aa12.15□□□□□ -0.47
PMS1-213ENST00000441310 CR1P17927 2039 aa12.14□□□□□ -0.47
PMS1-213ENST00000441310 KNCNA6PVL3 124 aa12.14□□□□□ -0.47
PMS1-213ENST00000441310 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.14□□□□□ -0.47
PMS1-213ENST00000441310 LINC00846Q9NV44 126 aa12.14□□□□□ -0.47
PMS1-213ENST00000441310 IGHV3-38A0A0C4DH36 116 aa12.13□□□□□ -0.47
PMS1-213ENST00000441310 IGHV4-31P0DP07 118 aa12.13□□□□□ -0.47
PMS1-213ENST00000441310 SPINK13Q1W4C9 94 aa12.13□□□□□ -0.47
PMS1-213ENST00000441310 LINC01561Q8N1V8 128 aa12.13□□□□□ -0.47
PMS1-213ENST00000441310 FAM222AQ5U5X8 452 aa12.13□□□□□ -0.47
PMS1-213ENST00000441310 UBE2D4Q9Y2X8 147 aa12.12□□□□□ -0.47
PMS1-213ENST00000441310 IGHV1OR15-1A0A075B7D0 117 aa12.12□□□□□ -0.47
PMS1-213ENST00000441310 PIK3CD-AS1Q5SR53 167 aa12.12□□□□□ -0.47
PMS1-213ENST00000441310 COX6A2Q02221 97 aa12.11□□□□□ -0.47
PMS1-213ENST00000441310 DEFB113Q30KQ7 82 aa12.11□□□□□ -0.47
PMS1-213ENST00000441310 LINC00467Q9BRT7 94 aa12.11□□□□□ -0.47
PMS1-213ENST00000441310 HECTD1Q9ULT8 2610 aa12.11□□□□□ -0.47
PMS1-213ENST00000441310 CFHR3Q02985 330 aa12.11□□□□□ -0.47
PMS1-213ENST00000441310 FHL2Q14192 279 aa12.1□□□□□ -0.47
PMS1-213ENST00000441310 PSMB8P28062 276 aa12.1□□□□□ -0.47
PMS1-213ENST00000441310 CHCHD7Q9BUK0 85 aa12.1□□□□□ -0.47
PMS1-213ENST00000441310 H3BUA1 57 aa12.09□□□□□ -0.47
PMS1-213ENST00000441310 Q6JHZ5 121 aa12.09□□□□□ -0.47
PMS1-213ENST00000441310 FASNP49327 2511 aaKnown RBP12.09□□□□□ -0.47
PMS1-213ENST00000441310 DEFB136Q30KP8 78 aa12.09□□□□□ -0.47
PMS1-213ENST00000441310 DGAT2L7PQ6IED9 249 aa12.08□□□□□ -0.48
PMS1-213ENST00000441310 C18orf65Q6ZTR6 163 aa12.08□□□□□ -0.48
PMS1-213ENST00000441310 HILS1P60008 231 aa12.07□□□□□ -0.48
PMS1-213ENST00000441310 A0A087WYN8 130 aa12.07□□□□□ -0.48
PMS1-213ENST00000441310 JMJD1CQ15652 2540 aa12.07□□□□□ -0.48
PMS1-213ENST00000441310 J3QLI3 93 aa12.06□□□□□ -0.48
PMS1-213ENST00000441310 PRM2P04554 102 aa12.06□□□□□ -0.48
PMS1-213ENST00000441310 KHDC1LQ5JSQ8 128 aa12.06□□□□□ -0.48
PMS1-213ENST00000441310 WFDC11Q8NEX6 87 aa12.06□□□□□ -0.48
PMS1-213ENST00000441310 WFDC9Q8NEX5 89 aa12.06□□□□□ -0.48
PMS1-213ENST00000441310 Q6ZSN1 163 aa12.05□□□□□ -0.48
PMS1-213ENST00000441310 NCR3O14931 201 aa12.05□□□□□ -0.48
PMS1-213ENST00000441310 Q6YL49 198 aa12.05□□□□□ -0.48
PMS1-213ENST00000441310 COPS9Q8WXC6 57 aa12.05□□□□□ -0.48
PMS1-213ENST00000441310 C11orf44Q8N8P7 122 aa12.04□□□□□ -0.48
PMS1-213ENST00000441310 ZNF702PQ9H963 129 aa12.04□□□□□ -0.48
PMS1-213ENST00000441310 CRPP02741 224 aa12.03□□□□□ -0.48
PMS1-213ENST00000441310 MRAPQ8TCY5 172 aa12.03□□□□□ -0.48
PMS1-213ENST00000441310 TRAV23DV6A0A075B6W5 121 aa12.03□□□□□ -0.48
PMS1-213ENST00000441310 GHRHP01286 108 aa12.03□□□□□ -0.48
PMS1-213ENST00000441310 PFN2P35080 140 aa12.03□□□□□ -0.48
PMS1-213ENST00000441310 UNC79Q9P2D8 2635 aa12.03□□□□□ -0.48
PMS1-213ENST00000441310 NIPBLQ6KC79 2804 aaeCLIP12.03□□□□□ -0.48
PMS1-213ENST00000441310 C20orf197Q8N268 126 aa12.02□□□□□ -0.49
PMS1-213ENST00000441310 TMEM243Q9BU79 118 aa12.02□□□□□ -0.49
PMS1-213ENST00000441310 IGHV3OR16-12A0A075B7B8 117 aa12.01□□□□□ -0.49
PMS1-213ENST00000441310 SLPIP03973 132 aa12.01□□□□□ -0.49
PMS1-213ENST00000441310 IGLV5-39A0A0G2JS06 123 aa12.01□□□□□ -0.49
PMS1-213ENST00000441310 LINC00242Q5T6M2 205 aa12.01□□□□□ -0.49
PMS1-213ENST00000441310 LINC00337Q8N6G1 96 aa12.01□□□□□ -0.49
PMS1-213ENST00000441310 IGLV5-45A0A087WSX0 123 aa12.01□□□□□ -0.49
PMS1-213ENST00000441310 SMIM1B2RUZ4 78 aa12□□□□□ -0.49
PMS1-213ENST00000441310 RPL28P46779 137 aaKnown RBP12□□□□□ -0.49
PMS1-213ENST00000441310 SLURP1P55000 103 aa12□□□□□ -0.49
PMS1-213ENST00000441310 ZNF415Q09FC8 603 aa12□□□□□ -0.49
PMS1-213ENST00000441310 KRTAP1-3Q8IUG1 177 aa12□□□□□ -0.49
PMS1-213ENST00000441310 LECT2O14960 151 aa12□□□□□ -0.49
PMS1-213ENST00000441310 FSHBP01225 129 aa12□□□□□ -0.49
PMS1-213ENST00000441310 LINC00336Q6ZUF6 198 aa11.99□□□□□ -0.49
PMS1-213ENST00000441310 C1orf43Q9BWL3 253 aa11.99□□□□□ -0.49
PMS1-213ENST00000441310 TRAV13-2A0A0B4J235 113 aa11.99□□□□□ -0.49
PMS1-213ENST00000441310 SMIM11BQ8TCY0 68 aa11.99□□□□□ -0.49
PMS1-213ENST00000441310 C2CD3Q4AC94 2353 aa11.98□□□□□ -0.49
PMS1-213ENST00000441310 K7EMT4 169 aa11.98□□□□□ -0.49
PMS1-213ENST00000441310 RBMY1BA6NDE4 496 aaKnown RBP11.98□□□□□ -0.49
PMS1-213ENST00000441310 RBMY1EA6NEQ0 496 aaKnown RBP11.98□□□□□ -0.49
PMS1-213ENST00000441310 RBMY1DP0C7P1 496 aaKnown RBP11.98□□□□□ -0.49
PMS1-213ENST00000441310 RBMY1A1P0DJD3 496 aaKnown RBP11.98□□□□□ -0.49
PMS1-213ENST00000441310 RBMY1CP0DJD4 496 aa11.98□□□□□ -0.49
PMS1-213ENST00000441310 RBMY1FQ15415 496 aaKnown RBP11.98□□□□□ -0.49
PMS1-213ENST00000441310 SNRPD3P62318 126 aaKnown RBP11.97□□□□□ -0.49
PMS1-213ENST00000441310 FAM19A1Q7Z5A9 133 aa11.97□□□□□ -0.49
PMS1-213ENST00000441310 FAM236DA0A1B0GTK5 79 aa11.97□□□□□ -0.49
PMS1-213ENST00000441310 FAM236CP0DP71 79 aa11.97□□□□□ -0.49
PMS1-213ENST00000441310 FN1P02751 2386 aaKnown RBP11.97□□□□□ -0.49
PMS1-213ENST00000441310 GCN1Q92616 2671 aaKnown RBP11.96□□□□□ -0.49
PMS1-213ENST00000441310 NDUFC2O95298 119 aa11.96□□□□□ -0.49
PMS1-213ENST00000441310 SND1-IT1Q9HBX3 110 aa11.96□□□□□ -0.49
PMS1-213ENST00000441310 IGKV2-28A0A075B6P5 120 aa11.96□□□□□ -0.5
PMS1-213ENST00000441310 IGKV2D-28P01615 120 aa11.96□□□□□ -0.5
PMS1-213ENST00000441310 MIR7-3HGQ8N6C7 128 aa11.96□□□□□ -0.5
PMS1-213ENST00000441310 PKIGQ9Y2B9 76 aa11.96□□□□□ -0.5
PMS1-213ENST00000441310 HIVEP2P31629 2446 aa11.95□□□□□ -0.5
PMS1-213ENST00000441310 A0A1W2PRX2 142 aa11.95□□□□□ -0.5
PMS1-213ENST00000441310 PDZD2O15018 2839 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms