RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 C5orf38Q86SI9 138 aa10.32□□□□□ -0.76
ITGB1-207ENST00000439974 C9orf163Q8N9P6 203 aa10.32□□□□□ -0.76
ITGB1-207ENST00000439974 CYSLTR1Q9Y271 337 aa10.32□□□□□ -0.76
ITGB1-207ENST00000439974 C1orf196B1AJZ1 125 aa10.31□□□□□ -0.76
ITGB1-207ENST00000439974 MRPS36P82909 103 aaKnown RBP10.31□□□□□ -0.76
ITGB1-207ENST00000439974 RPL37AP61513 92 aaKnown RBP10.3□□□□□ -0.76
ITGB1-207ENST00000439974 CFAP161Q6P656 301 aa10.3□□□□□ -0.76
ITGB1-207ENST00000439974 OXTP01178 125 aa10.29□□□□□ -0.76
ITGB1-207ENST00000439974 TMEM141Q96I45 108 aa10.29□□□□□ -0.76
ITGB1-207ENST00000439974 SMCO4Q9NRQ5 59 aa10.29□□□□□ -0.76
ITGB1-207ENST00000439974 AP5S1Q9NUS5 200 aa10.29□□□□□ -0.76
ITGB1-207ENST00000439974 PYGO1Q9Y3Y4 419 aa10.29□□□□□ -0.76
ITGB1-207ENST00000439974 COX7A2LO14548 114 aa10.28□□□□□ -0.76
ITGB1-207ENST00000439974 MALP21145 153 aa10.28□□□□□ -0.76
ITGB1-207ENST00000439974 FA2HQ7L5A8 372 aa10.28□□□□□ -0.76
ITGB1-207ENST00000439974 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.28□□□□□ -0.76
ITGB1-207ENST00000439974 GVQW2A0A096LPI5 108 aaPredicted RBP10.27□□□□□ -0.77
ITGB1-207ENST00000439974 IGHV1-58A0A0C4DH39 117 aa10.27□□□□□ -0.77
ITGB1-207ENST00000439974 IGIPA6NJ69 53 aa10.27□□□□□ -0.77
ITGB1-207ENST00000439974 CNBPP62633 177 aaKnown RBP10.27□□□□□ -0.77
ITGB1-207ENST00000439974 SDIM1Q6ZPB5 146 aa10.27□□□□□ -0.77
ITGB1-207ENST00000439974 LINC00173Q6ZV60 143 aa10.27□□□□□ -0.77
ITGB1-207ENST00000439974 C18orf32Q8TCD1 76 aa10.27□□□□□ -0.77
ITGB1-207ENST00000439974 TOMM6Q96B49 74 aa10.27□□□□□ -0.77
ITGB1-207ENST00000439974 URB1-AS1Q96HZ7 61 aa10.27□□□□□ -0.77
ITGB1-207ENST00000439974 PANO1I0J062 215 aa10.26□□□□□ -0.77
ITGB1-207ENST00000439974 K7EMI3 77 aa10.26□□□□□ -0.77
ITGB1-207ENST00000439974 COX6A2Q02221 97 aa10.26□□□□□ -0.77
ITGB1-207ENST00000439974 TEX43Q6ZNM6 134 aa10.26□□□□□ -0.77
ITGB1-207ENST00000439974 LINC01546A6NGU7 62 aa10.25□□□□□ -0.77
ITGB1-207ENST00000439974 PMCHL1Q16048 86 aa10.25□□□□□ -0.77
ITGB1-207ENST00000439974 SERTAD4-AS1Q5TG53 156 aa10.25□□□□□ -0.77
ITGB1-207ENST00000439974 SCGB3A1Q96QR1 104 aa10.25□□□□□ -0.77
ITGB1-207ENST00000439974 VCX2Q9H322 139 aa10.25□□□□□ -0.77
ITGB1-207ENST00000439974 SCO1O75880 301 aa10.24□□□□□ -0.77
ITGB1-207ENST00000439974 UBE2D1P51668 147 aa10.24□□□□□ -0.77
ITGB1-207ENST00000439974 LINC00242Q5T6M2 205 aa10.24□□□□□ -0.77
ITGB1-207ENST00000439974 Q6ZN92 141 aa10.24□□□□□ -0.77
ITGB1-207ENST00000439974 AMELXQ99217 191 aa10.24□□□□□ -0.77
ITGB1-207ENST00000439974 IGLV4-69A0A075B6H9 119 aa10.23□□□□□ -0.77
ITGB1-207ENST00000439974 IGHV3-64A0A075B6Q5 118 aa10.23□□□□□ -0.77
ITGB1-207ENST00000439974 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.23□□□□□ -0.77
ITGB1-207ENST00000439974 CHTF8P0CG12 524 aa10.23□□□□□ -0.77
ITGB1-207ENST00000439974 IGHV3OR16-9A0A0B4J2B5 98 aa10.22□□□□□ -0.77
ITGB1-207ENST00000439974 ZNF561-AS1K7EIQ3 104 aa10.22□□□□□ -0.77
ITGB1-207ENST00000439974 HNRNPA3P51991 378 aaKnown RBP10.22□□□□□ -0.77
ITGB1-207ENST00000439974 CIRBPQ14011 172 aaKnown RBP10.22□□□□□ -0.77
ITGB1-207ENST00000439974 TIMM17AQ99595 171 aa10.22□□□□□ -0.77
ITGB1-207ENST00000439974 C2orf88Q9BSF0 95 aa10.22□□□□□ -0.77
ITGB1-207ENST00000439974 A0A096LNJ9 63 aa10.21□□□□□ -0.77
ITGB1-207ENST00000439974 LINC00614P0C842 121 aa10.21□□□□□ -0.77
ITGB1-207ENST00000439974 SPAG11BQ08648 103 aa10.21□□□□□ -0.77
ITGB1-207ENST00000439974 ERASQ7Z444 233 aa10.21□□□□□ -0.77
ITGB1-207ENST00000439974 ORAOV1Q8WV07 137 aa10.21□□□□□ -0.77
ITGB1-207ENST00000439974 TRGC2P03986 189 aa10.2□□□□□ -0.78
ITGB1-207ENST00000439974 G0S2P27469 103 aa10.2□□□□□ -0.78
ITGB1-207ENST00000439974 CARD19Q96LW7 228 aa10.2□□□□□ -0.78
ITGB1-207ENST00000439974 UBR4Q5T4S7 5183 aa10.2□□□□□ -0.78
ITGB1-207ENST00000439974 A0A0J9YXV3 536 aa10.19□□□□□ -0.78
ITGB1-207ENST00000439974 SYCNQ0VAF6 134 aa10.19□□□□□ -0.78
ITGB1-207ENST00000439974 Q6ZRU5 148 aa10.19□□□□□ -0.78
ITGB1-207ENST00000439974 IGKV2-24A0A0C4DH68 120 aa10.18□□□□□ -0.78
ITGB1-207ENST00000439974 COLCA2A8K830 154 aa10.18□□□□□ -0.78
ITGB1-207ENST00000439974 APOMO95445 188 aa10.18□□□□□ -0.78
ITGB1-207ENST00000439974 DPH3Q96FX2 82 aa10.18□□□□□ -0.78
ITGB1-207ENST00000439974 CAMK2N2Q96S95 79 aa10.18□□□□□ -0.78
ITGB1-207ENST00000439974 A0A087WZ39 114 aa10.17□□□□□ -0.78
ITGB1-207ENST00000439974 NPSP0C0P6 89 aa10.17□□□□□ -0.78
ITGB1-207ENST00000439974 SPACA4Q8TDM5 124 aa10.17□□□□□ -0.78
ITGB1-207ENST00000439974 A0A087WYN8 130 aa10.16□□□□□ -0.78
ITGB1-207ENST00000439974 NDUFA6P56556 154 aa10.16□□□□□ -0.78
ITGB1-207ENST00000439974 PAPPA-AS1Q5QFB9 102 aa10.16□□□□□ -0.78
ITGB1-207ENST00000439974 CST9LQ9H4G1 147 aa10.16□□□□□ -0.78
ITGB1-207ENST00000439974 A0A096LNI7 61 aa10.15□□□□□ -0.78
ITGB1-207ENST00000439974 HBDP02042 147 aa10.15□□□□□ -0.78
ITGB1-207ENST00000439974 C10orf25Q5T742 122 aa10.15□□□□□ -0.78
ITGB1-207ENST00000439974 OR10D4PQ8NGN7 298 aa10.15□□□□□ -0.78
ITGB1-207ENST00000439974 CDKN2A-AS1Q9UH64 79 aa10.15□□□□□ -0.78
ITGB1-207ENST00000439974 PLA2G2DQ9UNK4 145 aa10.15□□□□□ -0.78
ITGB1-207ENST00000439974 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.14□□□□□ -0.79
ITGB1-207ENST00000439974 RAB5BP61020 215 aa10.14□□□□□ -0.79
ITGB1-207ENST00000439974 MAJINQ3KP22 176 aa10.14□□□□□ -0.79
ITGB1-207ENST00000439974 PDZD11Q5EBL8 140 aa10.14□□□□□ -0.79
ITGB1-207ENST00000439974 UNQ6190/PRO20217Q6UXQ8 127 aa10.14□□□□□ -0.79
ITGB1-207ENST00000439974 GEMIN7Q9H840 131 aaKnown RBP10.14□□□□□ -0.79
ITGB1-207ENST00000439974 PLAC8Q9NZF1 115 aa10.14□□□□□ -0.79
ITGB1-207ENST00000439974 KIAA0087Q14695 138 aa10.13□□□□□ -0.79
ITGB1-207ENST00000439974 PMVKQ15126 192 aa10.13□□□□□ -0.79
ITGB1-207ENST00000439974 C2orf82Q6UX34 121 aa10.13□□□□□ -0.79
ITGB1-207ENST00000439974 FAM19A3Q7Z5A8 133 aa10.13□□□□□ -0.79
ITGB1-207ENST00000439974 BAGE3Q86Y29 109 aa10.13□□□□□ -0.79
ITGB1-207ENST00000439974 LINC00469Q8N7U9 141 aa10.13□□□□□ -0.79
ITGB1-207ENST00000439974 C2orf48Q96LS8 159 aa10.13□□□□□ -0.79
ITGB1-207ENST00000439974 TOMM7Q9P0U1 55 aa10.13□□□□□ -0.79
ITGB1-207ENST00000439974 HERVK_113P63121 156 aa10.12□□□□□ -0.79
ITGB1-207ENST00000439974 GAGE2BQ13066 116 aa10.12□□□□□ -0.79
ITGB1-207ENST00000439974 FAM19A2Q8N3H0 131 aa10.12□□□□□ -0.79
ITGB1-207ENST00000439974 LINC01549A6NIU2 74 aa10.11□□□□□ -0.79
ITGB1-207ENST00000439974 C7orf33Q8WU49 177 aa10.11□□□□□ -0.79
ITGB1-207ENST00000439974 TNXBP22105 4242 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms