RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 SFTA2Q6UW10 78 aa10.47□□□□□ -0.73
CPSF7-205ENST00000439958 NDUFA12Q9UI09 145 aa10.47□□□□□ -0.73
CPSF7-205ENST00000439958 TINCRA0A1B0GVN0 87 aa10.46□□□□□ -0.73
CPSF7-205ENST00000439958 HERVK_113P63121 156 aa10.46□□□□□ -0.73
CPSF7-205ENST00000439958 A6NDN8 102 aa10.46□□□□□ -0.74
CPSF7-205ENST00000439958 DLEU1O43261 78 aa10.46□□□□□ -0.74
CPSF7-205ENST00000439958 APOMO95445 188 aa10.46□□□□□ -0.74
CPSF7-205ENST00000439958 SPATA25Q9BR10 227 aa10.46□□□□□ -0.74
CPSF7-205ENST00000439958 DAND5Q8N907 189 aa10.45□□□□□ -0.74
CPSF7-205ENST00000439958 LEPROTO15243 131 aa10.45□□□□□ -0.74
CPSF7-205ENST00000439958 MRPL52Q86TS9 123 aaKnown RBP10.45□□□□□ -0.74
CPSF7-205ENST00000439958 KLK12Q9UKR0 248 aa10.44□□□□□ -0.74
CPSF7-205ENST00000439958 IGHV1-58A0A0C4DH39 117 aa10.44□□□□□ -0.74
CPSF7-205ENST00000439958 TEX48A0A1B0GUV7 120 aa10.44□□□□□ -0.74
CPSF7-205ENST00000439958 SIVA1O15304 175 aa10.44□□□□□ -0.74
CPSF7-205ENST00000439958 CCL25O15444 150 aa10.44□□□□□ -0.74
CPSF7-205ENST00000439958 SEC11AP67812 179 aa10.44□□□□□ -0.74
CPSF7-205ENST00000439958 H7C2G1 150 aa10.43□□□□□ -0.74
CPSF7-205ENST00000439958 MEIG1Q5JSS6 88 aa10.43□□□□□ -0.74
CPSF7-205ENST00000439958 CEND1Q8N111 149 aa10.42□□□□□ -0.74
CPSF7-205ENST00000439958 Q9H8V8 135 aa10.42□□□□□ -0.74
CPSF7-205ENST00000439958 H3BUT2 72 aa10.42□□□□□ -0.74
CPSF7-205ENST00000439958 CSDC2Q9Y534 153 aaKnown RBP10.41□□□□□ -0.74
CPSF7-205ENST00000439958 SS18Q15532 418 aa10.41□□□□□ -0.74
CPSF7-205ENST00000439958 UBE2WQ96B02 151 aa10.41□□□□□ -0.74
CPSF7-205ENST00000439958 IGLL5B9A064 214 aa10.4□□□□□ -0.74
CPSF7-205ENST00000439958 SMIM13P0DJ93 91 aa10.4□□□□□ -0.74
CPSF7-205ENST00000439958 C10orf126Q8N4M7 172 aa10.4□□□□□ -0.74
CPSF7-205ENST00000439958 HIGD1BQ9P298 99 aa10.4□□□□□ -0.74
CPSF7-205ENST00000439958 LINC00959A0A1B0GUT2 108 aa10.39□□□□□ -0.75
CPSF7-205ENST00000439958 CMYA5Q8N3K9 4069 aa10.39□□□□□ -0.75
CPSF7-205ENST00000439958 H7C423 109 aa10.38□□□□□ -0.75
CPSF7-205ENST00000439958 TAX1BP3O14907 124 aa10.38□□□□□ -0.75
CPSF7-205ENST00000439958 MALP21145 153 aa10.38□□□□□ -0.75
CPSF7-205ENST00000439958 TIRAPP58753 221 aa10.38□□□□□ -0.75
CPSF7-205ENST00000439958 REG3AQ06141 175 aa10.38□□□□□ -0.75
CPSF7-205ENST00000439958 WFDC10BQ8IUB3 73 aa10.38□□□□□ -0.75
CPSF7-205ENST00000439958 TENM2Q9NT68 2774 aa10.38□□□□□ -0.75
CPSF7-205ENST00000439958 LYPD5Q6UWN5 251 aa10.38□□□□□ -0.75
CPSF7-205ENST00000439958 COX11Q9Y6N1 276 aa10.38□□□□□ -0.75
CPSF7-205ENST00000439958 A0A0J9YXY3 114 aa10.38□□□□□ -0.75
CPSF7-205ENST00000439958 SMIM1B2RUZ4 78 aa10.38□□□□□ -0.75
CPSF7-205ENST00000439958 CRPP02741 224 aa10.38□□□□□ -0.75
CPSF7-205ENST00000439958 NPSP0C0P6 89 aa10.37□□□□□ -0.75
CPSF7-205ENST00000439958 LELP1Q5T871 98 aa10.37□□□□□ -0.75
CPSF7-205ENST00000439958 C6orf226Q5I0X4 101 aa10.36□□□□□ -0.75
CPSF7-205ENST00000439958 LINC00526Q96FQ7 95 aa10.36□□□□□ -0.75
CPSF7-205ENST00000439958 TMEM238C9JI98 176 aa10.36□□□□□ -0.75
CPSF7-205ENST00000439958 PFN2P35080 140 aa10.36□□□□□ -0.75
CPSF7-205ENST00000439958 Q9HAA7 133 aa10.36□□□□□ -0.75
CPSF7-205ENST00000439958 Q1RN00 199 aa10.35□□□□□ -0.75
CPSF7-205ENST00000439958 CHCHD10Q8WYQ3 142 aaPredicted RBP10.35□□□□□ -0.75
CPSF7-205ENST00000439958 MUSTN1Q8IVN3 82 aa10.34□□□□□ -0.75
CPSF7-205ENST00000439958 TMEM238LA0A1B0GVL6 79 aa10.34□□□□□ -0.75
CPSF7-205ENST00000439958 A6NJY4 79 aa10.34□□□□□ -0.75
CPSF7-205ENST00000439958 SH2D6Q7Z4S9 175 aa10.34□□□□□ -0.75
CPSF7-205ENST00000439958 LURAP1LQ8IV03 231 aa10.34□□□□□ -0.75
CPSF7-205ENST00000439958 COL7A1Q02388 2944 aa10.34□□□□□ -0.75
CPSF7-205ENST00000439958 CIRBPQ14011 172 aaKnown RBP10.34□□□□□ -0.75
CPSF7-205ENST00000439958 ESRGQ1W209 222 aa10.34□□□□□ -0.75
CPSF7-205ENST00000439958 LOC107984156A0A0G2JMH3 177 aa10.33□□□□□ -0.76
CPSF7-205ENST00000439958 ADAMTSL4-AS1Q5T5F5 129 aa10.33□□□□□ -0.76
CPSF7-205ENST00000439958 ARL17AQ8IVW1 177 aa10.33□□□□□ -0.76
CPSF7-205ENST00000439958 TM2D3Q9BRN9 247 aa10.33□□□□□ -0.76
CPSF7-205ENST00000439958 ZFAND6Q6FIF0 208 aa10.33□□□□□ -0.76
CPSF7-205ENST00000439958 COX7B2Q8TF08 81 aa10.33□□□□□ -0.76
CPSF7-205ENST00000439958 A4D1N5 150 aa10.32□□□□□ -0.76
CPSF7-205ENST00000439958 LINC00158P58513 81 aa10.32□□□□□ -0.76
CPSF7-205ENST00000439958 A0A1B0GUV1 79 aa10.32□□□□□ -0.76
CPSF7-205ENST00000439958 C2orf82Q6UX34 121 aa10.32□□□□□ -0.76
CPSF7-205ENST00000439958 TM2D2Q9BX73 214 aa10.32□□□□□ -0.76
CPSF7-205ENST00000439958 PGPEP1Q9NXJ5 209 aa10.32□□□□□ -0.76
CPSF7-205ENST00000439958 TRAV10A0A0B4J240 114 aa10.31□□□□□ -0.76
CPSF7-205ENST00000439958 IGHV3OR16-9A0A0B4J2B5 98 aa10.31□□□□□ -0.76
CPSF7-205ENST00000439958 GAGE12HA6NDE8 117 aa10.31□□□□□ -0.76
CPSF7-205ENST00000439958 COX7A2LO14548 114 aa10.31□□□□□ -0.76
CPSF7-205ENST00000439958 IGLV5-45A0A087WSX0 123 aa10.3□□□□□ -0.76
CPSF7-205ENST00000439958 CKS1BP61024 79 aa10.3□□□□□ -0.76
CPSF7-205ENST00000439958 TAL2Q16559 108 aa10.3□□□□□ -0.76
CPSF7-205ENST00000439958 CFAP161Q6P656 301 aa10.29□□□□□ -0.76
CPSF7-205ENST00000439958 GAGE10A6NGK3 116 aa10.29□□□□□ -0.76
CPSF7-205ENST00000439958 FABP2P12104 132 aa10.29□□□□□ -0.76
CPSF7-205ENST00000439958 RPL24P83731 157 aaKnown RBP10.29□□□□□ -0.76
CPSF7-205ENST00000439958 C9orf118A6NHY6 69 aa10.28□□□□□ -0.76
CPSF7-205ENST00000439958 PSMB2P49721 201 aa10.28□□□□□ -0.76
CPSF7-205ENST00000439958 IGKV2D-24A0A075B6R9 120 aa10.28□□□□□ -0.76
CPSF7-205ENST00000439958 NDUFA1O15239 70 aa10.28□□□□□ -0.76
CPSF7-205ENST00000439958 SCGB1C2P0DMR2 95 aa10.28□□□□□ -0.76
CPSF7-205ENST00000439958 SPCS1Q9Y6A9 102 aa10.28□□□□□ -0.76
CPSF7-205ENST00000439958 IGLV5-39A0A0G2JS06 123 aa10.27□□□□□ -0.77
CPSF7-205ENST00000439958 MTURNQ8N3F0 131 aa10.27□□□□□ -0.77
CPSF7-205ENST00000439958 DNHD1Q96M86 4753 aa10.27□□□□□ -0.77
CPSF7-205ENST00000439958 A0A087WZ39 114 aa10.27□□□□□ -0.77
CPSF7-205ENST00000439958 EIF4EBP3O60516 100 aaPredicted RBP10.27□□□□□ -0.77
CPSF7-205ENST00000439958 TGP01266 2768 aa10.26□□□□□ -0.77
CPSF7-205ENST00000439958 CCL18P55774 89 aa10.26□□□□□ -0.77
CPSF7-205ENST00000439958 HIGD2BQ4VC39 106 aa10.25□□□□□ -0.77
CPSF7-205ENST00000439958 CD164L2Q6UWJ8 174 aa10.25□□□□□ -0.77
CPSF7-205ENST00000439958 MIR7-3HGQ8N6C7 128 aa10.25□□□□□ -0.77
CPSF7-205ENST00000439958 CFC1BP0CG36 223 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms