RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 LINC00614P0C842 121 aa7.06□□□□□ -1.28
CSTF3-203ENST00000438862 ESDP10768 282 aa7.06□□□□□ -1.28
CSTF3-203ENST00000438862 FCER1GP30273 86 aa7.06□□□□□ -1.28
CSTF3-203ENST00000438862 CIRBPQ14011 172 aaKnown RBP7.06□□□□□ -1.28
CSTF3-203ENST00000438862 ORMDL2Q53FV1 153 aa7.06□□□□□ -1.28
CSTF3-203ENST00000438862 CHCHD1Q96BP2 118 aaKnown RBP7.06□□□□□ -1.28
CSTF3-203ENST00000438862 DPH3Q96FX2 82 aa7.06□□□□□ -1.28
CSTF3-203ENST00000438862 FAT4Q6V0I7 4981 aa7.06□□□□□ -1.28
CSTF3-203ENST00000438862 MUC2Q02817 5179 aa7.05□□□□□ -1.28
CSTF3-203ENST00000438862 LOC389332A0A1B0GUA5 103 aa7.05□□□□□ -1.28
CSTF3-203ENST00000438862 HIST1H2BKO60814 126 aa7.05□□□□□ -1.28
CSTF3-203ENST00000438862 TSHBP01222 138 aa7.05□□□□□ -1.28
CSTF3-203ENST00000438862 HIST1H2BJP06899 126 aa7.05□□□□□ -1.28
CSTF3-203ENST00000438862 HIST1H2BOP23527 126 aa7.05□□□□□ -1.28
CSTF3-203ENST00000438862 HIST1H2BBP33778 126 aa7.05□□□□□ -1.28
CSTF3-203ENST00000438862 IFI27P40305 119 aaPredicted RBP7.05□□□□□ -1.28
CSTF3-203ENST00000438862 HIST1H2BDP58876 126 aa7.05□□□□□ -1.28
CSTF3-203ENST00000438862 HIST1H2BCP62807 126 aa7.05□□□□□ -1.28
CSTF3-203ENST00000438862 SMAGPQ0VAQ4 97 aa7.05□□□□□ -1.28
CSTF3-203ENST00000438862 HIST2H2BEQ16778 126 aa7.05□□□□□ -1.28
CSTF3-203ENST00000438862 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.05□□□□□ -1.28
CSTF3-203ENST00000438862 REG3GQ6UW15 175 aa7.05□□□□□ -1.28
CSTF3-203ENST00000438862 NTM-AS1Q6ZSK4 140 aa7.05□□□□□ -1.28
CSTF3-203ENST00000438862 FA2HQ7L5A8 372 aa7.05□□□□□ -1.28
CSTF3-203ENST00000438862 HIST1H2BHQ93079 126 aa7.05□□□□□ -1.28
CSTF3-203ENST00000438862 TMEM18Q96B42 140 aa7.05□□□□□ -1.28
CSTF3-203ENST00000438862 HIST1H2BNQ99877 126 aa7.05□□□□□ -1.28
CSTF3-203ENST00000438862 HIST1H2BMQ99879 126 aa7.05□□□□□ -1.28
CSTF3-203ENST00000438862 CHCHD7Q9BUK0 85 aa7.05□□□□□ -1.28
CSTF3-203ENST00000438862 C1orf43Q9BWL3 253 aa7.05□□□□□ -1.28
CSTF3-203ENST00000438862 PRSS1P07477 247 aa7.04□□□□□ -1.28
CSTF3-203ENST00000438862 AMTP48728 403 aa7.04□□□□□ -1.28
CSTF3-203ENST00000438862 COA6Q5JTJ3 125 aaKnown RBP7.04□□□□□ -1.28
CSTF3-203ENST00000438862 BAGE3Q86Y29 109 aa7.04□□□□□ -1.28
CSTF3-203ENST00000438862 C7orf33Q8WU49 177 aa7.04□□□□□ -1.28
CSTF3-203ENST00000438862 TMEM243Q9BU79 118 aa7.04□□□□□ -1.28
CSTF3-203ENST00000438862 A0A087WX48 190 aa7.03□□□□□ -1.28
CSTF3-203ENST00000438862 A0A1B0GUV1 79 aa7.03□□□□□ -1.28
CSTF3-203ENST00000438862 USP17L23D6RBM5 183 aa7.03□□□□□ -1.28
CSTF3-203ENST00000438862 NPSP0C0P6 89 aa7.03□□□□□ -1.28
CSTF3-203ENST00000438862 C20orf203Q8NBC4 194 aa7.03□□□□□ -1.28
CSTF3-203ENST00000438862 TIMM21Q9BVV7 248 aa7.03□□□□□ -1.28
CSTF3-203ENST00000438862 CSDC2Q9Y534 153 aaKnown RBP7.03□□□□□ -1.28
CSTF3-203ENST00000438862 A0A087WYN8 130 aa7.02□□□□□ -1.29
CSTF3-203ENST00000438862 ZNF25P17030 456 aaPredicted RBP7.02□□□□□ -1.29
CSTF3-203ENST00000438862 MRPL52Q86TS9 123 aaKnown RBP7.02□□□□□ -1.29
CSTF3-203ENST00000438862 URB1-AS1Q96HZ7 61 aa7.02□□□□□ -1.29
CSTF3-203ENST00000438862 UBE2L6O14933 153 aa7.01□□□□□ -1.29
CSTF3-203ENST00000438862 SLPIP03973 132 aa7.01□□□□□ -1.29
CSTF3-203ENST00000438862 ANKRD39Q53RE8 183 aa7.01□□□□□ -1.29
CSTF3-203ENST00000438862 SPINK6Q6UWN8 80 aa7.01□□□□□ -1.29
CSTF3-203ENST00000438862 CHCHD5Q9BSY4 110 aa7.01□□□□□ -1.29
CSTF3-203ENST00000438862 CYSLTR1Q9Y271 337 aa7.01□□□□□ -1.29
CSTF3-203ENST00000438862 PYGO1Q9Y3Y4 419 aa7.01□□□□□ -1.29
CSTF3-203ENST00000438862 HSBP1O75506 76 aa7□□□□□ -1.29
CSTF3-203ENST00000438862 SPANXA1Q9NS26 97 aa7□□□□□ -1.29
CSTF3-203ENST00000438862 SERF1AO75920 110 aa6.99□□□□□ -1.29
CSTF3-203ENST00000438862 HBDP02042 147 aa6.99□□□□□ -1.29
CSTF3-203ENST00000438862 CRPP02741 224 aa6.99□□□□□ -1.29
CSTF3-203ENST00000438862 RNASEKQ6P5S7 137 aaKnown RBP6.99□□□□□ -1.29
CSTF3-203ENST00000438862 ENHOQ6UWT2 76 aa6.99□□□□□ -1.29
CSTF3-203ENST00000438862 C2orf66Q6UXQ4 117 aa6.99□□□□□ -1.29
CSTF3-203ENST00000438862 TOMM6Q96B49 74 aa6.99□□□□□ -1.29
CSTF3-203ENST00000438862 PACRGQ96M98 296 aaPredicted RBP6.99□□□□□ -1.29
CSTF3-203ENST00000438862 PLAC8Q9NZF1 115 aa6.99□□□□□ -1.29
CSTF3-203ENST00000438862 IGHV3-64A0A075B6Q5 118 aa6.98□□□□□ -1.29
CSTF3-203ENST00000438862 TMEM262E9PQX1 116 aa6.98□□□□□ -1.29
CSTF3-203ENST00000438862 FGF6P10767 208 aa6.98□□□□□ -1.29
CSTF3-203ENST00000438862 CNBPP62633 177 aaKnown RBP6.98□□□□□ -1.29
CSTF3-203ENST00000438862 PRR3P79522 188 aaKnown RBP6.98□□□□□ -1.29
CSTF3-203ENST00000438862 MRPS36P82909 103 aaKnown RBP6.98□□□□□ -1.29
CSTF3-203ENST00000438862 PAPPA-AS1Q5QFB9 102 aa6.98□□□□□ -1.29
CSTF3-203ENST00000438862 AMMECR1LQ6DCA0 310 aa6.98□□□□□ -1.29
CSTF3-203ENST00000438862 ERASQ7Z444 233 aa6.98□□□□□ -1.29
CSTF3-203ENST00000438862 SPACA4Q8TDM5 124 aa6.98□□□□□ -1.29
CSTF3-203ENST00000438862 TMEM141Q96I45 108 aa6.98□□□□□ -1.29
CSTF3-203ENST00000438862 TMEM101Q96IK0 257 aa6.98□□□□□ -1.29
CSTF3-203ENST00000438862 TIMM17AQ99595 171 aa6.98□□□□□ -1.29
CSTF3-203ENST00000438862 UBE2D4Q9Y2X8 147 aa6.98□□□□□ -1.29
CSTF3-203ENST00000438862 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.97□□□□□ -1.29
CSTF3-203ENST00000438862 IGKV2-29A2NJV5 120 aaPredicted RBP6.97□□□□□ -1.29
CSTF3-203ENST00000438862 IGIPA6NJ69 53 aa6.97□□□□□ -1.29
CSTF3-203ENST00000438862 S100A6P06703 90 aa6.97□□□□□ -1.29
CSTF3-203ENST00000438862 NDUFA6P56556 154 aa6.97□□□□□ -1.29
CSTF3-203ENST00000438862 RBX1P62877 108 aa6.97□□□□□ -1.29
CSTF3-203ENST00000438862 GAGE6Q13070 117 aa6.97□□□□□ -1.29
CSTF3-203ENST00000438862 A0A096LNJ9 63 aa6.96□□□□□ -1.3
CSTF3-203ENST00000438862 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.96□□□□□ -1.3
CSTF3-203ENST00000438862 CCL25O15444 150 aa6.96□□□□□ -1.3
CSTF3-203ENST00000438862 ATP5LO75964 103 aa6.96□□□□□ -1.3
CSTF3-203ENST00000438862 MIAQ16674 131 aa6.96□□□□□ -1.3
CSTF3-203ENST00000438862 MPV17L2Q567V2 206 aa6.96□□□□□ -1.3
CSTF3-203ENST00000438862 PDZD11Q5EBL8 140 aa6.96□□□□□ -1.3
CSTF3-203ENST00000438862 OR5A1Q8NGJ0 315 aa6.96□□□□□ -1.3
CSTF3-203ENST00000438862 CDC42SE2Q9NRR3 84 aa6.96□□□□□ -1.3
CSTF3-203ENST00000438862 NUPR1O60356 82 aa6.95□□□□□ -1.3
CSTF3-203ENST00000438862 CHTF8P0CG12 524 aa6.95□□□□□ -1.3
CSTF3-203ENST00000438862 RPL39P62891 51 aaKnown RBP6.95□□□□□ -1.3
CSTF3-203ENST00000438862 ZNF664Q8N3J9 261 aa6.95□□□□□ -1.3
CSTF3-203ENST00000438862 SCGB3A1Q96QR1 104 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms