RNA–Protein interactions for RNA: ENST00000438510.5

HLA-DMB-259, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-259ENST00000438510 FAM104AQ969W3 186 aa7.06□□□□□ -1.28
HLA-DMB-259ENST00000438510 AMELXQ99217 191 aa7.06□□□□□ -1.28
HLA-DMB-259ENST00000438510 TRAV13-1A0A0B4J241 112 aa7.05□□□□□ -1.28
HLA-DMB-259ENST00000438510 PMVKQ15126 192 aa7.05□□□□□ -1.28
HLA-DMB-259ENST00000438510 SPATA12Q7Z6I5 190 aa7.05□□□□□ -1.28
HLA-DMB-259ENST00000438510 BAALCQ8WXS3 180 aa7.05□□□□□ -1.28
HLA-DMB-259ENST00000438510 CHCHD10Q8WYQ3 142 aaPredicted RBP7.05□□□□□ -1.28
HLA-DMB-259ENST00000438510 FRAS1Q86XX4 4008 aa7.04□□□□□ -1.28
HLA-DMB-259ENST00000438510 XCL1P47992 114 aa7.04□□□□□ -1.28
HLA-DMB-259ENST00000438510 PET117Q6UWS5 81 aa7.04□□□□□ -1.28
HLA-DMB-259ENST00000438510 LINC00336Q6ZUF6 198 aa7.04□□□□□ -1.28
HLA-DMB-259ENST00000438510 LINC00173Q6ZV60 143 aa7.04□□□□□ -1.28
HLA-DMB-259ENST00000438510 IFI27L1Q96BM0 104 aa7.04□□□□□ -1.28
HLA-DMB-259ENST00000438510 VAMP8Q9BV40 100 aa7.04□□□□□ -1.28
HLA-DMB-259ENST00000438510 GAGE12HA6NDE8 117 aa7.03□□□□□ -1.28
HLA-DMB-259ENST00000438510 LINC00587B1AMM8 73 aa7.03□□□□□ -1.28
HLA-DMB-259ENST00000438510 RTL8CO15255 209 aa7.03□□□□□ -1.28
HLA-DMB-259ENST00000438510 UBE2D1P51668 147 aa7.03□□□□□ -1.28
HLA-DMB-259ENST00000438510 SEC11AP67812 179 aa7.03□□□□□ -1.28
HLA-DMB-259ENST00000438510 CD164L2Q6UWJ8 174 aa7.03□□□□□ -1.28
HLA-DMB-259ENST00000438510 DNAH2Q9P225 4427 aa7.02□□□□□ -1.28
HLA-DMB-259ENST00000438510 PRSS1P07477 247 aa7.02□□□□□ -1.29
HLA-DMB-259ENST00000438510 C3orf79P0CE67 100 aa7.02□□□□□ -1.29
HLA-DMB-259ENST00000438510 KRTDAPP60985 99 aa7.02□□□□□ -1.29
HLA-DMB-259ENST00000438510 ZC2HC1BQ5TFG8 222 aa7.02□□□□□ -1.29
HLA-DMB-259ENST00000438510 FAM19A3Q7Z5A8 133 aa7.02□□□□□ -1.29
HLA-DMB-259ENST00000438510 CST9LQ9H4G1 147 aa7.02□□□□□ -1.29
HLA-DMB-259ENST00000438510 TRAV12-1A0A0B4J245 112 aa7.01□□□□□ -1.29
HLA-DMB-259ENST00000438510 PRSS29PA6NIE9 313 aa7.01□□□□□ -1.29
HLA-DMB-259ENST00000438510 EREGO14944 169 aa7.01□□□□□ -1.29
HLA-DMB-259ENST00000438510 HERVK_113P63121 156 aa7.01□□□□□ -1.29
HLA-DMB-259ENST00000438510 FOXI1Q12951 378 aa7.01□□□□□ -1.29
HLA-DMB-259ENST00000438510 KRTAP26-1Q6PEX3 210 aa7.01□□□□□ -1.29
HLA-DMB-259ENST00000438510 MIEN1Q9BRT3 115 aa7.01□□□□□ -1.29
HLA-DMB-259ENST00000438510 MAP1LC3CQ9BXW4 147 aa7.01□□□□□ -1.29
HLA-DMB-259ENST00000438510 GEMIN7Q9H840 131 aaKnown RBP7.01□□□□□ -1.29
HLA-DMB-259ENST00000438510 DNAH10Q8IVF4 4471 aa7□□□□□ -1.29
HLA-DMB-259ENST00000438510 COX7A2LO14548 114 aa7□□□□□ -1.29
HLA-DMB-259ENST00000438510 C14orf177Q52M58 125 aa7□□□□□ -1.29
HLA-DMB-259ENST00000438510 LINC00242Q5T6M2 205 aa7□□□□□ -1.29
HLA-DMB-259ENST00000438510 A0A087WTM6 91 aa6.99□□□□□ -1.29
HLA-DMB-259ENST00000438510 TINCRA0A1B0GVN0 87 aa6.99□□□□□ -1.29
HLA-DMB-259ENST00000438510 SYS1-DBNDD2H3BUS1 97 aa6.99□□□□□ -1.29
HLA-DMB-259ENST00000438510 APOMO95445 188 aa6.99□□□□□ -1.29
HLA-DMB-259ENST00000438510 MALP21145 153 aa6.99□□□□□ -1.29
HLA-DMB-259ENST00000438510 TNP2Q05952 138 aa6.99□□□□□ -1.29
HLA-DMB-259ENST00000438510 CDPF1Q6NVV7 123 aa6.99□□□□□ -1.29
HLA-DMB-259ENST00000438510 CFAP161Q6P656 301 aa6.99□□□□□ -1.29
HLA-DMB-259ENST00000438510 MAPKAPK5-AS1Q8N8E1 139 aa6.99□□□□□ -1.29
HLA-DMB-259ENST00000438510 UQCR10Q9UDW1 63 aa6.99□□□□□ -1.29
HLA-DMB-259ENST00000438510 CHTOPQ9Y3Y2 248 aaKnown RBP6.99□□□□□ -1.29
HLA-DMB-259ENST00000438510 IGHV3OR16-9A0A0B4J2B5 98 aa6.98□□□□□ -1.29
HLA-DMB-259ENST00000438510 IGHV1-58A0A0C4DH39 117 aa6.98□□□□□ -1.29
HLA-DMB-259ENST00000438510 A0A0J9YXV3 536 aa6.98□□□□□ -1.29
HLA-DMB-259ENST00000438510 LRCOL1A6NCL2 159 aa6.98□□□□□ -1.29
HLA-DMB-259ENST00000438510 USP17L23D6RBM5 183 aa6.98□□□□□ -1.29
HLA-DMB-259ENST00000438510 F8VRH5 84 aa6.98□□□□□ -1.29
HLA-DMB-259ENST00000438510 H0Y8G0 127 aa6.98□□□□□ -1.29
HLA-DMB-259ENST00000438510 IGLC3P0DOY3 106 aa6.98□□□□□ -1.29
HLA-DMB-259ENST00000438510 C14orf144Q96I85 54 aa6.98□□□□□ -1.29
HLA-DMB-259ENST00000438510 CHAC1Q9BUX1 264 aa6.98□□□□□ -1.29
HLA-DMB-259ENST00000438510 A0A087WZ39 114 aa6.97□□□□□ -1.29
HLA-DMB-259ENST00000438510 HSBP1L1C9JCN9 74 aa6.97□□□□□ -1.29
HLA-DMB-259ENST00000438510 LECT2O14960 151 aa6.97□□□□□ -1.29
HLA-DMB-259ENST00000438510 COX6A2Q02221 97 aa6.97□□□□□ -1.29
HLA-DMB-259ENST00000438510 LINC01545Q5VT33 79 aa6.97□□□□□ -1.29
HLA-DMB-259ENST00000438510 C5orf38Q86SI9 138 aa6.97□□□□□ -1.29
HLA-DMB-259ENST00000438510 LINC00528Q8N1L1 170 aa6.97□□□□□ -1.29
HLA-DMB-259ENST00000438510 LINC01561Q8N1V8 128 aa6.97□□□□□ -1.29
HLA-DMB-259ENST00000438510 LINC00469Q8N7U9 141 aa6.97□□□□□ -1.29
HLA-DMB-259ENST00000438510 DNAH17Q9UFH2 4485 aa6.97□□□□□ -1.29
HLA-DMB-259ENST00000438510 IGLV4-69A0A075B6H9 119 aa6.96□□□□□ -1.3
HLA-DMB-259ENST00000438510 IGLV5-45A0A087WSX0 123 aa6.96□□□□□ -1.3
HLA-DMB-259ENST00000438510 H3BRM9 83 aa6.96□□□□□ -1.3
HLA-DMB-259ENST00000438510 M0R143 59 aa6.96□□□□□ -1.3
HLA-DMB-259ENST00000438510 ODF1Q14990 250 aa6.96□□□□□ -1.3
HLA-DMB-259ENST00000438510 Q8N814 137 aa6.96□□□□□ -1.3
HLA-DMB-259ENST00000438510 PMCHL2Q9BQD1 86 aa6.96□□□□□ -1.3
HLA-DMB-259ENST00000438510 MRPL35Q9NZE8 188 aaKnown RBP6.96□□□□□ -1.3
HLA-DMB-259ENST00000438510 EPPK1P58107 5090 aaKnown RBP6.96□□□□□ -1.3
HLA-DMB-259ENST00000438510 GVQW2A0A096LPI5 108 aaPredicted RBP6.95□□□□□ -1.3
HLA-DMB-259ENST00000438510 hDV102S1A0JD36 115 aa6.95□□□□□ -1.3
HLA-DMB-259ENST00000438510 PLNP26678 52 aa6.95□□□□□ -1.3
HLA-DMB-259ENST00000438510 WFDC2Q14508 124 aa6.95□□□□□ -1.3
HLA-DMB-259ENST00000438510 SPATA45Q537H7 98 aa6.95□□□□□ -1.3
HLA-DMB-259ENST00000438510 C15orf56Q8N910 161 aa6.95□□□□□ -1.3
HLA-DMB-259ENST00000438510 PRO1933Q9H354 126 aa6.95□□□□□ -1.3
HLA-DMB-259ENST00000438510 CDKN2A-AS1Q9UH64 79 aa6.95□□□□□ -1.3
HLA-DMB-259ENST00000438510 IGHV3-64A0A075B6Q5 118 aa6.94□□□□□ -1.3
HLA-DMB-259ENST00000438510 C11orf86A6NJI1 115 aa6.94□□□□□ -1.3
HLA-DMB-259ENST00000438510 ZNF561-AS1K7EIQ3 104 aa6.94□□□□□ -1.3
HLA-DMB-259ENST00000438510 TMEM170BQ5T4T1 132 aa6.94□□□□□ -1.3
HLA-DMB-259ENST00000438510 NTN5Q8WTR8 489 aaPredicted RBP6.94□□□□□ -1.3
HLA-DMB-259ENST00000438510 ORAOV1Q8WV07 137 aa6.94□□□□□ -1.3
HLA-DMB-259ENST00000438510 PAM16Q9Y3D7 125 aa6.94□□□□□ -1.3
HLA-DMB-259ENST00000438510 DPM2O94777 84 aa6.93□□□□□ -1.3
HLA-DMB-259ENST00000438510 ZNF22P17026 224 aaPredicted RBP6.93□□□□□ -1.3
HLA-DMB-259ENST00000438510 SPAG11BQ08648 103 aa6.93□□□□□ -1.3
HLA-DMB-259ENST00000438510 FAT2Q9NYQ8 4349 aa6.93□□□□□ -1.3
HLA-DMB-259ENST00000438510 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms