RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 RETNLBQ9BQ08 111 aa8.73□□□□□ -1.01
HDAC8-213ENST00000436675 A0A087X002 238 aa8.72□□□□□ -1.01
HDAC8-213ENST00000436675 HIGD1CA8MV81 97 aa8.72□□□□□ -1.01
HDAC8-213ENST00000436675 C9orf129Q5T035 196 aaKnown RBP8.72□□□□□ -1.01
HDAC8-213ENST00000436675 FAM231DQ6ZW35 169 aa8.72□□□□□ -1.01
HDAC8-213ENST00000436675 TIMM21Q9BVV7 248 aa8.72□□□□□ -1.01
HDAC8-213ENST00000436675 CEBPGP53567 150 aa8.71□□□□□ -1.02
HDAC8-213ENST00000436675 C2orf82Q6UX34 121 aa8.71□□□□□ -1.02
HDAC8-213ENST00000436675 FAM104AQ969W3 186 aa8.71□□□□□ -1.02
HDAC8-213ENST00000436675 TMEM18Q96B42 140 aa8.71□□□□□ -1.02
HDAC8-213ENST00000436675 IFITM10A6NMD0 228 aa8.7□□□□□ -1.02
HDAC8-213ENST00000436675 RGS21Q2M5E4 152 aa8.7□□□□□ -1.02
HDAC8-213ENST00000436675 TYMSOSQ8TAI1 123 aa8.7□□□□□ -1.02
HDAC8-213ENST00000436675 KIAA0087Q14695 138 aa8.69□□□□□ -1.02
HDAC8-213ENST00000436675 CT83Q5H943 113 aa8.69□□□□□ -1.02
HDAC8-213ENST00000436675 PPP1R17O96001 155 aa8.68□□□□□ -1.02
HDAC8-213ENST00000436675 TAGLN2P37802 199 aaKnown RBP8.68□□□□□ -1.02
HDAC8-213ENST00000436675 LINC00469Q8N7U9 141 aa8.68□□□□□ -1.02
HDAC8-213ENST00000436675 CTDSP1Q9GZU7 261 aa8.68□□□□□ -1.02
HDAC8-213ENST00000436675 TGIF2-C20orf24A0A0A6YYL0 155 aa8.67□□□□□ -1.02
HDAC8-213ENST00000436675 NDUFC2-KCTD14E9PQ53 114 aa8.67□□□□□ -1.02
HDAC8-213ENST00000436675 PPP1R2P9O14990 202 aa8.67□□□□□ -1.02
HDAC8-213ENST00000436675 HBBP68871 147 aa8.67□□□□□ -1.02
HDAC8-213ENST00000436675 RIGQ13278 110 aa8.67□□□□□ -1.02
HDAC8-213ENST00000436675 MRPL51Q4U2R6 128 aaKnown RBP8.67□□□□□ -1.02
HDAC8-213ENST00000436675 CDIP1Q9H305 208 aa8.67□□□□□ -1.02
HDAC8-213ENST00000436675 ANAPC11Q9NYG5 84 aa8.67□□□□□ -1.02
HDAC8-213ENST00000436675 TRBV30A0A0K0K1B3 111 aa8.66□□□□□ -1.02
HDAC8-213ENST00000436675 CRYGAP11844 174 aa8.66□□□□□ -1.02
HDAC8-213ENST00000436675 PACRGQ96M98 296 aaPredicted RBP8.66□□□□□ -1.02
HDAC8-213ENST00000436675 C22orf24Q9Y442 160 aa8.66□□□□□ -1.02
HDAC8-213ENST00000436675 NUPR1O60356 82 aa8.65□□□□□ -1.02
HDAC8-213ENST00000436675 FSIP2Q5CZC0 6907 aa8.65□□□□□ -1.03
HDAC8-213ENST00000436675 TMEM250H0YL14 139 aa8.64□□□□□ -1.03
HDAC8-213ENST00000436675 MRPS36P82909 103 aaKnown RBP8.64□□□□□ -1.03
HDAC8-213ENST00000436675 SPANXA1Q9NS26 97 aa8.64□□□□□ -1.03
HDAC8-213ENST00000436675 TCAPO15273 167 aa8.63□□□□□ -1.03
HDAC8-213ENST00000436675 FAM104BQ5XKR9 115 aa8.63□□□□□ -1.03
HDAC8-213ENST00000436675 XAGE1AQ9HD64 81 aa8.63□□□□□ -1.03
HDAC8-213ENST00000436675 CKS2P33552 79 aa8.62□□□□□ -1.03
HDAC8-213ENST00000436675 RPL28P46779 137 aaKnown RBP8.62□□□□□ -1.03
HDAC8-213ENST00000436675 LINC00242Q5T6M2 205 aa8.62□□□□□ -1.03
HDAC8-213ENST00000436675 LINC01551Q86U37 167 aa8.62□□□□□ -1.03
HDAC8-213ENST00000436675 SMIM7Q9BQ49 75 aa8.62□□□□□ -1.03
HDAC8-213ENST00000436675 C20orf78Q9BR46 151 aa8.62□□□□□ -1.03
HDAC8-213ENST00000436675 BATF3Q9NR55 127 aa8.62□□□□□ -1.03
HDAC8-213ENST00000436675 OSTCQ9NRP0 149 aa8.62□□□□□ -1.03
HDAC8-213ENST00000436675 IGLV7-46A0A075B6I9 117 aa8.61□□□□□ -1.03
HDAC8-213ENST00000436675 ZNF727A8MUV8 499 aa8.61□□□□□ -1.03
HDAC8-213ENST00000436675 TNFRSF6BO95407 300 aa8.61□□□□□ -1.03
HDAC8-213ENST00000436675 KRTAP13-2Q52LG2 175 aa8.61□□□□□ -1.03
HDAC8-213ENST00000436675 LBHQ53QV2 105 aaPredicted RBP8.61□□□□□ -1.03
HDAC8-213ENST00000436675 SMIM2Q9BVW6 85 aa8.61□□□□□ -1.03
HDAC8-213ENST00000436675 TOMM7Q9P0U1 55 aa8.61□□□□□ -1.03
HDAC8-213ENST00000436675 BCE1O60756 84 aa8.6□□□□□ -1.03
HDAC8-213ENST00000436675 SLC51BQ86UW2 128 aa8.6□□□□□ -1.03
HDAC8-213ENST00000436675 V9GYV3 84 aa8.6□□□□□ -1.03
HDAC8-213ENST00000436675 TRBV24-1A0A075B6N3 115 aa8.59□□□□□ -1.03
HDAC8-213ENST00000436675 TPRXLQ17RH7 258 aa8.59□□□□□ -1.03
HDAC8-213ENST00000436675 LINC00173Q6ZV60 143 aa8.59□□□□□ -1.03
HDAC8-213ENST00000436675 LINC00304Q8N9R0 145 aa8.59□□□□□ -1.03
HDAC8-213ENST00000436675 LINC00862A6NCI5 91 aa8.58□□□□□ -1.04
HDAC8-213ENST00000436675 RPL37AP8A6NKH3 93 aa8.58□□□□□ -1.04
HDAC8-213ENST00000436675 NPYP01303 97 aa8.58□□□□□ -1.04
HDAC8-213ENST00000436675 PRSS2P07478 247 aa8.58□□□□□ -1.04
HDAC8-213ENST00000436675 CKS1BP61024 79 aa8.58□□□□□ -1.04
HDAC8-213ENST00000436675 RPL32P62910 135 aaKnown RBP8.58□□□□□ -1.04
HDAC8-213ENST00000436675 ZC2HC1BQ5TFG8 222 aa8.58□□□□□ -1.04
HDAC8-213ENST00000436675 MRPL55Q7Z7F7 128 aaKnown RBP8.58□□□□□ -1.04
HDAC8-213ENST00000436675 IGLV4-3A0A075B6K6 122 aa8.57□□□□□ -1.04
HDAC8-213ENST00000436675 D6R8Y8 96 aa8.57□□□□□ -1.04
HDAC8-213ENST00000436675 IFI27P40305 119 aaPredicted RBP8.57□□□□□ -1.04
HDAC8-213ENST00000436675 NAT8BQ9UHF3 227 aa8.57□□□□□ -1.04
HDAC8-213ENST00000436675 GAGE10A6NGK3 116 aa8.56□□□□□ -1.04
HDAC8-213ENST00000436675 C6orf226Q5I0X4 101 aa8.56□□□□□ -1.04
HDAC8-213ENST00000436675 EIF5A2Q9GZV4 153 aaKnown RBP8.56□□□□□ -1.04
HDAC8-213ENST00000436675 TMEM141Q96I45 108 aa8.55□□□□□ -1.04
HDAC8-213ENST00000436675 LINC00167Q96N53 147 aa8.55□□□□□ -1.04
HDAC8-213ENST00000436675 CRCT1Q9UGL9 99 aa8.55□□□□□ -1.04
HDAC8-213ENST00000436675 BLOC1S1P78537 153 aa8.54□□□□□ -1.04
HDAC8-213ENST00000436675 FAM74A3Q4VXF1 159 aa8.54□□□□□ -1.04
HDAC8-213ENST00000436675 LCE2DQ5TA82 110 aaPredicted RBP8.54□□□□□ -1.04
HDAC8-213ENST00000436675 ALKAL2Q6UX46 152 aa8.54□□□□□ -1.04
HDAC8-213ENST00000436675 TEX43Q6ZNM6 134 aa8.54□□□□□ -1.04
HDAC8-213ENST00000436675 RAB5AP20339 215 aa8.53□□□□□ -1.04
HDAC8-213ENST00000436675 UBE2AP49459 152 aa8.53□□□□□ -1.04
HDAC8-213ENST00000436675 MRPL54Q6P161 138 aaKnown RBP8.53□□□□□ -1.04
HDAC8-213ENST00000436675 Q6ZN92 141 aa8.53□□□□□ -1.04
HDAC8-213ENST00000436675 LINC01561Q8N1V8 128 aa8.53□□□□□ -1.04
HDAC8-213ENST00000436675 ALKBH7Q9BT30 221 aaPredicted RBP8.53□□□□□ -1.04
HDAC8-213ENST00000436675 PPDPFQ9H3Y8 114 aa8.53□□□□□ -1.04
HDAC8-213ENST00000436675 TP73-AS1Q9UF72 201 aa8.53□□□□□ -1.04
HDAC8-213ENST00000436675 PYGO1Q9Y3Y4 419 aa8.53□□□□□ -1.04
HDAC8-213ENST00000436675 IGKV2D-26A0A0A0MRZ7 120 aa8.52□□□□□ -1.05
HDAC8-213ENST00000436675 SRP19P09132 144 aaKnown RBP8.52□□□□□ -1.05
HDAC8-213ENST00000436675 LINC01547P58512 204 aaPredicted RBP8.52□□□□□ -1.05
HDAC8-213ENST00000436675 SMIM27A0A1W2PRY6 76 aa8.51□□□□□ -1.05
HDAC8-213ENST00000436675 ADIRFQ15847 76 aa8.51□□□□□ -1.05
HDAC8-213ENST00000436675 FAM229BQ4G0N7 80 aa8.51□□□□□ -1.05
HDAC8-213ENST00000436675 C2orf88Q9BSF0 95 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms