RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 C11orf52Q96A22 123 aa4.98□□□□□ -1.61
NIF3L1-208ENST00000436412 BIN3Q9NQY0 253 aa4.98□□□□□ -1.61
NIF3L1-208ENST00000436412 G3V3Q6 166 aa4.97□□□□□ -1.61
NIF3L1-208ENST00000436412 CENPWQ5EE01 88 aa4.97□□□□□ -1.61
NIF3L1-208ENST00000436412 RPL39LQ96EH5 51 aaKnown RBP4.97□□□□□ -1.61
NIF3L1-208ENST00000436412 TRBV6-5A0A0K0K1A5 114 aa4.96□□□□□ -1.62
NIF3L1-208ENST00000436412 CCL20P78556 96 aa4.96□□□□□ -1.62
NIF3L1-208ENST00000436412 SMAGPQ0VAQ4 97 aa4.96□□□□□ -1.62
NIF3L1-208ENST00000436412 KRTAP11-1Q8IUC1 163 aa4.96□□□□□ -1.62
NIF3L1-208ENST00000436412 OR10D4PQ8NGN7 298 aa4.96□□□□□ -1.62
NIF3L1-208ENST00000436412 FAM213BQ8TBF2 198 aa4.96□□□□□ -1.62
NIF3L1-208ENST00000436412 URB1-AS1Q96HZ7 61 aa4.96□□□□□ -1.62
NIF3L1-208ENST00000436412 OPRPNQ99935 248 aaPredicted RBP4.96□□□□□ -1.62
NIF3L1-208ENST00000436412 MANBALQ9NQG1 85 aa4.96□□□□□ -1.62
NIF3L1-208ENST00000436412 CYTL1Q9NRR1 136 aa4.96□□□□□ -1.62
NIF3L1-208ENST00000436412 MRPL35Q9NZE8 188 aaKnown RBP4.96□□□□□ -1.62
NIF3L1-208ENST00000436412 A0A1B0GV50 99 aa4.95□□□□□ -1.62
NIF3L1-208ENST00000436412 TSPAN13O95857 204 aa4.95□□□□□ -1.62
NIF3L1-208ENST00000436412 TSHBP01222 138 aa4.95□□□□□ -1.62
NIF3L1-208ENST00000436412 TLX1NBP0CAT3 122 aa4.95□□□□□ -1.62
NIF3L1-208ENST00000436412 GNG4P50150 75 aa4.95□□□□□ -1.62
NIF3L1-208ENST00000436412 SPAG11BQ08648 103 aa4.95□□□□□ -1.62
NIF3L1-208ENST00000436412 TMEM241Q24JQ0 296 aa4.95□□□□□ -1.62
NIF3L1-208ENST00000436412 CSDC2Q9Y534 153 aaKnown RBP4.95□□□□□ -1.62
NIF3L1-208ENST00000436412 FSIP2Q5CZC0 6907 aa4.94□□□□□ -1.62
NIF3L1-208ENST00000436412 FAM168BA1KXE4 195 aa4.94□□□□□ -1.62
NIF3L1-208ENST00000436412 C7orf77A4D0Y5 90 aa4.94□□□□□ -1.62
NIF3L1-208ENST00000436412 NDUFA1O15239 70 aa4.94□□□□□ -1.62
NIF3L1-208ENST00000436412 ZNF861PO60384 105 aa4.94□□□□□ -1.62
NIF3L1-208ENST00000436412 MT3P25713 68 aa4.94□□□□□ -1.62
NIF3L1-208ENST00000436412 UBE2BP63146 152 aa4.94□□□□□ -1.62
NIF3L1-208ENST00000436412 FAM19A5Q7Z5A7 132 aaPredicted RBP4.94□□□□□ -1.62
NIF3L1-208ENST00000436412 RPP21Q9H633 154 aaKnown RBP4.94□□□□□ -1.62
NIF3L1-208ENST00000436412 ST20Q9HBF5 79 aa4.94□□□□□ -1.62
NIF3L1-208ENST00000436412 CRCT1Q9UGL9 99 aa4.94□□□□□ -1.62
NIF3L1-208ENST00000436412 TRBV27A0A0K0K1C4 114 aa4.93□□□□□ -1.62
NIF3L1-208ENST00000436412 RAB19A4D1S5 217 aa4.93□□□□□ -1.62
NIF3L1-208ENST00000436412 IFITM10A6NMD0 228 aa4.93□□□□□ -1.62
NIF3L1-208ENST00000436412 M0QXV9 152 aa4.93□□□□□ -1.62
NIF3L1-208ENST00000436412 POLR2KP53803 58 aaKnown RBP4.93□□□□□ -1.62
NIF3L1-208ENST00000436412 TPRXLQ17RH7 258 aa4.93□□□□□ -1.62
NIF3L1-208ENST00000436412 C5orf38Q86SI9 138 aa4.93□□□□□ -1.62
NIF3L1-208ENST00000436412 CTDSP1Q9GZU7 261 aa4.93□□□□□ -1.62
NIF3L1-208ENST00000436412 TMEM242Q9NWH2 141 aa4.93□□□□□ -1.62
NIF3L1-208ENST00000436412 TRAV13-1A0A0B4J241 112 aa4.92□□□□□ -1.62
NIF3L1-208ENST00000436412 ARPC5O15511 151 aa4.92□□□□□ -1.62
NIF3L1-208ENST00000436412 PDE6DO43924 150 aa4.92□□□□□ -1.62
NIF3L1-208ENST00000436412 SMDT1Q9H4I9 107 aa4.92□□□□□ -1.62
NIF3L1-208ENST00000436412 GNG13Q9P2W3 67 aa4.92□□□□□ -1.62
NIF3L1-208ENST00000436412 TRBV20OR9-2A0A075B6H5 130 aa4.91□□□□□ -1.62
NIF3L1-208ENST00000436412 NUPR1O60356 82 aa4.91□□□□□ -1.62
NIF3L1-208ENST00000436412 CRYGAP11844 174 aa4.91□□□□□ -1.62
NIF3L1-208ENST00000436412 FOXA3P55318 350 aaPredicted RBP4.91□□□□□ -1.62
NIF3L1-208ENST00000436412 GAGE2EQ4V326 116 aa4.91□□□□□ -1.62
NIF3L1-208ENST00000436412 KRTAP7-1Q8IUC3 87 aa4.91□□□□□ -1.62
NIF3L1-208ENST00000436412 TYMSOSQ8TAI1 123 aa4.91□□□□□ -1.62
NIF3L1-208ENST00000436412 ORAOV1Q8WV07 137 aa4.91□□□□□ -1.62
NIF3L1-208ENST00000436412 RNASE7Q9H1E1 156 aaKnown RBP4.91□□□□□ -1.62
NIF3L1-208ENST00000436412 GAGE2DQ9UEU5 116 aa4.91□□□□□ -1.62
NIF3L1-208ENST00000436412 TEX46H3BTG2 121 aa4.9□□□□□ -1.63
NIF3L1-208ENST00000436412 VCYO14598 125 aa4.9□□□□□ -1.63
NIF3L1-208ENST00000436412 FCER1GP30273 86 aa4.9□□□□□ -1.63
NIF3L1-208ENST00000436412 CTAG1AP78358 180 aa4.9□□□□□ -1.63
NIF3L1-208ENST00000436412 ZNF345Q14585 488 aa4.9□□□□□ -1.63
NIF3L1-208ENST00000436412 TMEM18Q96B42 140 aa4.9□□□□□ -1.63
NIF3L1-208ENST00000436412 TIMM21Q9BVV7 248 aa4.9□□□□□ -1.63
NIF3L1-208ENST00000436412 MED9Q9NWA0 146 aa4.9□□□□□ -1.63
NIF3L1-208ENST00000436412 C6orf48Q9UBA6 75 aa4.9□□□□□ -1.63
NIF3L1-208ENST00000436412 UBE2D4Q9Y2X8 147 aa4.9□□□□□ -1.63
NIF3L1-208ENST00000436412 A0A087X002 238 aa4.89□□□□□ -1.63
NIF3L1-208ENST00000436412 IGHV3OR16-9A0A0B4J2B5 98 aa4.89□□□□□ -1.63
NIF3L1-208ENST00000436412 TRBV30A0A0K0K1B3 111 aa4.89□□□□□ -1.63
NIF3L1-208ENST00000436412 PPP1R17O96001 155 aa4.89□□□□□ -1.63
NIF3L1-208ENST00000436412 RNASE13Q5GAN3 156 aaKnown RBP4.89□□□□□ -1.63
NIF3L1-208ENST00000436412 UNQ6190/PRO20217Q6UXQ8 127 aa4.89□□□□□ -1.63
NIF3L1-208ENST00000436412 IGLV7-46A0A075B6I9 117 aa4.88□□□□□ -1.63
NIF3L1-208ENST00000436412 A8MWL6 223 aa4.88□□□□□ -1.63
NIF3L1-208ENST00000436412 NDUFC2-KCTD14E9PQ53 114 aa4.88□□□□□ -1.63
NIF3L1-208ENST00000436412 RPL28P46779 137 aaKnown RBP4.88□□□□□ -1.63
NIF3L1-208ENST00000436412 LINC01547P58512 204 aaPredicted RBP4.88□□□□□ -1.63
NIF3L1-208ENST00000436412 KIR2DL4Q99706 377 aa4.88□□□□□ -1.63
NIF3L1-208ENST00000436412 TMEM191AQ9H0A3 160 aa4.88□□□□□ -1.63
NIF3L1-208ENST00000436412 TCAPO15273 167 aa4.87□□□□□ -1.63
NIF3L1-208ENST00000436412 LBHQ53QV2 105 aaPredicted RBP4.87□□□□□ -1.63
NIF3L1-208ENST00000436412 Q6ZUT4 128 aa4.87□□□□□ -1.63
NIF3L1-208ENST00000436412 OCC1Q8TAD7 63 aa4.87□□□□□ -1.63
NIF3L1-208ENST00000436412 BORCS7Q96B45 105 aa4.87□□□□□ -1.63
NIF3L1-208ENST00000436412 CHTOPQ9Y3Y2 248 aaKnown RBP4.87□□□□□ -1.63
NIF3L1-208ENST00000436412 A0A1B0GUT8 65 aa4.86□□□□□ -1.63
NIF3L1-208ENST00000436412 KANTRA0A1W2PQU2 76 aa4.86□□□□□ -1.63
NIF3L1-208ENST00000436412 K7EN84 100 aa4.86□□□□□ -1.63
NIF3L1-208ENST00000436412 PPP1R2P9O14990 202 aa4.86□□□□□ -1.63
NIF3L1-208ENST00000436412 RAB4AP20338 218 aa4.86□□□□□ -1.63
NIF3L1-208ENST00000436412 TAGLN2P37802 199 aaKnown RBP4.86□□□□□ -1.63
NIF3L1-208ENST00000436412 KIAA0087Q14695 138 aa4.86□□□□□ -1.63
NIF3L1-208ENST00000436412 C9orf129Q5T035 196 aaKnown RBP4.86□□□□□ -1.63
NIF3L1-208ENST00000436412 LINC00173Q6ZV60 143 aa4.86□□□□□ -1.63
NIF3L1-208ENST00000436412 RETNLBQ9BQ08 111 aa4.86□□□□□ -1.63
NIF3L1-208ENST00000436412 TGIF2-C20orf24A0A0A6YYL0 155 aa4.85□□□□□ -1.63
NIF3L1-208ENST00000436412 HMSDA8MTL9 139 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms