RNA–Protein interactions for RNA: ENST00000435497.1

LINC00028-201, long intergenic non-protein coding RNA 28, humanhuman

TSL 2 BASIC

Gene LINC00028, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00028-201ENST00000435497 ORAOV1Q8WV07 137 aa8.13□□□□□ -1.11
LINC00028-201ENST00000435497 IMMP2LQ96T52 175 aa8.13□□□□□ -1.11
LINC00028-201ENST00000435497 TIMM21Q9BVV7 248 aa8.13□□□□□ -1.11
LINC00028-201ENST00000435497 NAT8BQ9UHF3 227 aa8.13□□□□□ -1.11
LINC00028-201ENST00000435497 V9GYV3 84 aa8.13□□□□□ -1.11
LINC00028-201ENST00000435497 FAT4Q6V0I7 4981 aa8.12□□□□□ -1.11
LINC00028-201ENST00000435497 PEA15Q15121 130 aa8.12□□□□□ -1.11
LINC00028-201ENST00000435497 ADIRFQ15847 76 aa8.12□□□□□ -1.11
LINC00028-201ENST00000435497 FAM19A5Q7Z5A7 132 aaPredicted RBP8.12□□□□□ -1.11
LINC00028-201ENST00000435497 KIR2DL4Q99706 377 aa8.12□□□□□ -1.11
LINC00028-201ENST00000435497 C6orf48Q9UBA6 75 aa8.12□□□□□ -1.11
LINC00028-201ENST00000435497 F8WDY8 70 aa8.11□□□□□ -1.11
LINC00028-201ENST00000435497 RPL23P62829 140 aaKnown RBP8.11□□□□□ -1.11
LINC00028-201ENST00000435497 NAT8Q9UHE5 227 aa8.11□□□□□ -1.11
LINC00028-201ENST00000435497 PPP1R2P9O14990 202 aa8.1□□□□□ -1.11
LINC00028-201ENST00000435497 NDUFA1O15239 70 aa8.1□□□□□ -1.11
LINC00028-201ENST00000435497 RPL39P62891 51 aaKnown RBP8.1□□□□□ -1.11
LINC00028-201ENST00000435497 GAGE2EQ4V326 116 aa8.1□□□□□ -1.11
LINC00028-201ENST00000435497 GAGE2DQ9UEU5 116 aa8.1□□□□□ -1.11
LINC00028-201ENST00000435497 A0A1B0GVG6 124 aa8.09□□□□□ -1.11
LINC00028-201ENST00000435497 A0A1B0GW15 77 aa8.09□□□□□ -1.11
LINC00028-201ENST00000435497 KIAA0087Q14695 138 aa8.09□□□□□ -1.11
LINC00028-201ENST00000435497 MRPL51Q4U2R6 128 aaKnown RBP8.09□□□□□ -1.11
LINC00028-201ENST00000435497 LCE2AQ5TA79 106 aaPredicted RBP8.09□□□□□ -1.11
LINC00028-201ENST00000435497 FAM104BQ5XKR9 115 aa8.09□□□□□ -1.11
LINC00028-201ENST00000435497 TMEM18Q96B42 140 aa8.09□□□□□ -1.11
LINC00028-201ENST00000435497 SMDT1Q9H4I9 107 aa8.09□□□□□ -1.11
LINC00028-201ENST00000435497 SMIM27A0A1W2PRY6 76 aa8.08□□□□□ -1.12
LINC00028-201ENST00000435497 LINC00862A6NCI5 91 aa8.08□□□□□ -1.12
LINC00028-201ENST00000435497 CKS2P33552 79 aa8.08□□□□□ -1.12
LINC00028-201ENST00000435497 UBE2D1P51668 147 aa8.08□□□□□ -1.12
LINC00028-201ENST00000435497 C9JQL5 133 aa8.07□□□□□ -1.12
LINC00028-201ENST00000435497 M0QXV9 152 aa8.07□□□□□ -1.12
LINC00028-201ENST00000435497 S100A8P05109 93 aa8.07□□□□□ -1.12
LINC00028-201ENST00000435497 RPL13AP40429 203 aaKnown RBP8.07□□□□□ -1.12
LINC00028-201ENST00000435497 C20orf78Q9BR46 151 aa8.07□□□□□ -1.12
LINC00028-201ENST00000435497 TRBV24-1A0A075B6N3 115 aa8.06□□□□□ -1.12
LINC00028-201ENST00000435497 A0A0U1RQV1 116 aa8.06□□□□□ -1.12
LINC00028-201ENST00000435497 F8W036 122 aa8.06□□□□□ -1.12
LINC00028-201ENST00000435497 TCAPO15273 167 aa8.06□□□□□ -1.12
LINC00028-201ENST00000435497 UBE2BP63146 152 aa8.06□□□□□ -1.12
LINC00028-201ENST00000435497 SRSF3P84103 164 aaKnown RBP8.06□□□□□ -1.12
LINC00028-201ENST00000435497 C9orf129Q5T035 196 aaKnown RBP8.06□□□□□ -1.12
LINC00028-201ENST00000435497 CARHSP1Q9Y2V2 147 aaKnown RBP8.06□□□□□ -1.12
LINC00028-201ENST00000435497 RPL32P62910 135 aaKnown RBP8.05□□□□□ -1.12
LINC00028-201ENST00000435497 MRPS36P82909 103 aaKnown RBP8.05□□□□□ -1.12
LINC00028-201ENST00000435497 TNFRSF6BO95407 300 aa8.04□□□□□ -1.12
LINC00028-201ENST00000435497 TSPAN13O95857 204 aa8.04□□□□□ -1.12
LINC00028-201ENST00000435497 MRPL54Q6P161 138 aaKnown RBP8.04□□□□□ -1.12
LINC00028-201ENST00000435497 C2orf82Q6UX34 121 aa8.04□□□□□ -1.12
LINC00028-201ENST00000435497 SPANXA1Q9NS26 97 aa8.04□□□□□ -1.12
LINC00028-201ENST00000435497 IFITM10A6NMD0 228 aa8.03□□□□□ -1.12
LINC00028-201ENST00000435497 ZNF861PO60384 105 aa8.03□□□□□ -1.12
LINC00028-201ENST00000435497 HBBP68871 147 aa8.03□□□□□ -1.12
LINC00028-201ENST00000435497 TRBV30A0A0K0K1B3 111 aa8.02□□□□□ -1.13
LINC00028-201ENST00000435497 NDUFC2-KCTD14E9PQ53 114 aa8.02□□□□□ -1.13
LINC00028-201ENST00000435497 PPBPP02775 128 aa8.02□□□□□ -1.13
LINC00028-201ENST00000435497 LINC00242Q5T6M2 205 aa8.02□□□□□ -1.13
LINC00028-201ENST00000435497 SMIM2Q9BVW6 85 aa8.02□□□□□ -1.13
LINC00028-201ENST00000435497 D6R8Y8 96 aa8.01□□□□□ -1.13
LINC00028-201ENST00000435497 RAB5AP20339 215 aa8.01□□□□□ -1.13
LINC00028-201ENST00000435497 A0A087X002 238 aa8□□□□□ -1.13
LINC00028-201ENST00000435497 TGIF2-C20orf24A0A0A6YYL0 155 aa8□□□□□ -1.13
LINC00028-201ENST00000435497 KRTAP9-6A0A140TA67 174 aa8□□□□□ -1.13
LINC00028-201ENST00000435497 MUC17Q685J3 4493 aa8□□□□□ -1.13
LINC00028-201ENST00000435497 NPYP01303 97 aa7.99□□□□□ -1.13
LINC00028-201ENST00000435497 TMEM136Q6ZRR5 245 aa7.99□□□□□ -1.13
LINC00028-201ENST00000435497 ORMDL3Q8N138 153 aa7.99□□□□□ -1.13
LINC00028-201ENST00000435497 C22orf24Q9Y442 160 aa7.99□□□□□ -1.13
LINC00028-201ENST00000435497 IGLV4-3A0A075B6K6 122 aa7.98□□□□□ -1.13
LINC00028-201ENST00000435497 A0A1B0GXF2 115 aa7.98□□□□□ -1.13
LINC00028-201ENST00000435497 ATP5L2Q7Z4Y8 100 aa7.98□□□□□ -1.13
LINC00028-201ENST00000435497 PACRGQ96M98 296 aaPredicted RBP7.98□□□□□ -1.13
LINC00028-201ENST00000435497 CTDSP1Q9GZU7 261 aa7.98□□□□□ -1.13
LINC00028-201ENST00000435497 NUPR1O60356 82 aa7.97□□□□□ -1.13
LINC00028-201ENST00000435497 RAB14P61106 215 aa7.97□□□□□ -1.13
LINC00028-201ENST00000435497 LINC00469Q8N7U9 141 aa7.97□□□□□ -1.13
LINC00028-201ENST00000435497 PRELID3AQ96N28 172 aa7.97□□□□□ -1.13
LINC00028-201ENST00000435497 PYGO1Q9Y3Y4 419 aa7.97□□□□□ -1.13
LINC00028-201ENST00000435497 MT-ND4LP03901 98 aa7.96□□□□□ -1.14
LINC00028-201ENST00000435497 IFI27P40305 119 aaPredicted RBP7.96□□□□□ -1.14
LINC00028-201ENST00000435497 LINC01561Q8N1V8 128 aa7.96□□□□□ -1.14
LINC00028-201ENST00000435497 LOC389332A0A1B0GUA5 103 aa7.95□□□□□ -1.14
LINC00028-201ENST00000435497 PNRC1Q12796 327 aaPredicted RBP7.95□□□□□ -1.14
LINC00028-201ENST00000435497 ZC2HC1BQ5TFG8 222 aa7.95□□□□□ -1.14
LINC00028-201ENST00000435497 TYMSOSQ8TAI1 123 aa7.95□□□□□ -1.14
LINC00028-201ENST00000435497 ANAPC16Q96DE5 110 aa7.95□□□□□ -1.14
LINC00028-201ENST00000435497 XAGE1AQ9HD64 81 aa7.95□□□□□ -1.14
LINC00028-201ENST00000435497 TMEM141Q96I45 108 aa7.94□□□□□ -1.14
LINC00028-201ENST00000435497 ANAPC11Q9NYG5 84 aa7.94□□□□□ -1.14
LINC00028-201ENST00000435497 LAMTOR2Q9Y2Q5 125 aa7.94□□□□□ -1.14
LINC00028-201ENST00000435497 CRYGAP11844 174 aa7.93□□□□□ -1.14
LINC00028-201ENST00000435497 KRTAP13-2Q52LG2 175 aa7.93□□□□□ -1.14
LINC00028-201ENST00000435497 LBHQ53QV2 105 aaPredicted RBP7.93□□□□□ -1.14
LINC00028-201ENST00000435497 LINC00173Q6ZV60 143 aa7.93□□□□□ -1.14
LINC00028-201ENST00000435497 MAP1LC3AQ9H492 121 aa7.93□□□□□ -1.14
LINC00028-201ENST00000435497 PRSS47A8MTI9 375 aa7.92□□□□□ -1.14
LINC00028-201ENST00000435497 BCE1O60756 84 aa7.92□□□□□ -1.14
LINC00028-201ENST00000435497 TEX43Q6ZNM6 134 aa7.92□□□□□ -1.14
LINC00028-201ENST00000435497 RETNLBQ9BQ08 111 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms