RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 A0A0J9YX75 114 aa5.48□□□□□ -1.53
CPSF6-202ENST00000435070 COX7A2LO14548 114 aa5.48□□□□□ -1.53
CPSF6-202ENST00000435070 FAM218AQ96MZ4 157 aa5.48□□□□□ -1.53
CPSF6-202ENST00000435070 CDKN2A-AS1Q9UH64 79 aa5.48□□□□□ -1.53
CPSF6-202ENST00000435070 ATP5G1P05496 136 aa5.48□□□□□ -1.53
CPSF6-202ENST00000435070 Q9H8V8 135 aa5.48□□□□□ -1.53
CPSF6-202ENST00000435070 CELSR1Q9NYQ6 3014 aa5.48□□□□□ -1.53
CPSF6-202ENST00000435070 WNK1Q9H4A3 2382 aa5.48□□□□□ -1.53
CPSF6-202ENST00000435070 K7ENP7 123 aa5.48□□□□□ -1.53
CPSF6-202ENST00000435070 PRM2P04554 102 aa5.48□□□□□ -1.53
CPSF6-202ENST00000435070 C5orf38Q86SI9 138 aa5.48□□□□□ -1.53
CPSF6-202ENST00000435070 BDP1A6H8Y1 2624 aa5.48□□□□□ -1.53
CPSF6-202ENST00000435070 IGFL2Q6UWQ7 119 aa5.47□□□□□ -1.53
CPSF6-202ENST00000435070 SERP2Q8N6R1 65 aa5.47□□□□□ -1.53
CPSF6-202ENST00000435070 LINC00308Q8TCZ7 52 aa5.47□□□□□ -1.53
CPSF6-202ENST00000435070 C9orf129Q5T035 196 aaKnown RBP5.47□□□□□ -1.53
CPSF6-202ENST00000435070 NOP10Q9NPE3 64 aaKnown RBP5.47□□□□□ -1.53
CPSF6-202ENST00000435070 CEP295Q9C0D2 2601 aa5.47□□□□□ -1.53
CPSF6-202ENST00000435070 PIK3CD-AS1Q5SR53 167 aa5.47□□□□□ -1.53
CPSF6-202ENST00000435070 MED14OSP0DP75 135 aa5.46□□□□□ -1.53
CPSF6-202ENST00000435070 RPS28P62857 69 aaKnown RBP5.46□□□□□ -1.54
CPSF6-202ENST00000435070 TRBV6-5A0A0K0K1A5 114 aa5.46□□□□□ -1.54
CPSF6-202ENST00000435070 H0Y9J4 135 aa5.46□□□□□ -1.54
CPSF6-202ENST00000435070 Q8N6K4 173 aa5.46□□□□□ -1.54
CPSF6-202ENST00000435070 MRPS36P82909 103 aaKnown RBP5.46□□□□□ -1.54
CPSF6-202ENST00000435070 ODF3BA8MYP8 253 aa5.46□□□□□ -1.54
CPSF6-202ENST00000435070 XCL1P47992 114 aa5.46□□□□□ -1.54
CPSF6-202ENST00000435070 SOSTDC1Q6X4U4 206 aa5.46□□□□□ -1.54
CPSF6-202ENST00000435070 PLA2G1BP04054 148 aaKnown RBP5.45□□□□□ -1.54
CPSF6-202ENST00000435070 IGF2-ASQ6U949 168 aa5.45□□□□□ -1.54
CPSF6-202ENST00000435070 ZFHX2Q9C0A1 2572 aaPredicted RBP5.45□□□□□ -1.54
CPSF6-202ENST00000435070 LINC00846Q9NV44 126 aa5.45□□□□□ -1.54
CPSF6-202ENST00000435070 PYGO1Q9Y3Y4 419 aa5.45□□□□□ -1.54
CPSF6-202ENST00000435070 COL27A1Q8IZC6 1860 aaPredicted RBP5.45□□□□□ -1.54
CPSF6-202ENST00000435070 J3QLI3 93 aa5.45□□□□□ -1.54
CPSF6-202ENST00000435070 HILS1P60008 231 aa5.45□□□□□ -1.54
CPSF6-202ENST00000435070 GRNP28799 593 aaKnown RBP5.45□□□□□ -1.54
CPSF6-202ENST00000435070 DEFB136Q30KP8 78 aa5.45□□□□□ -1.54
CPSF6-202ENST00000435070 IGHV4-38-2P0DP08 117 aa5.44□□□□□ -1.54
CPSF6-202ENST00000435070 ATP5EP56381 51 aaPredicted RBP5.44□□□□□ -1.54
CPSF6-202ENST00000435070 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.44□□□□□ -1.54
CPSF6-202ENST00000435070 OTOGLQ3ZCN5 2332 aa5.44□□□□□ -1.54
CPSF6-202ENST00000435070 ZFP36P26651 326 aaKnown RBP5.44□□□□□ -1.54
CPSF6-202ENST00000435070 C22orf24Q9Y442 160 aa5.44□□□□□ -1.54
CPSF6-202ENST00000435070 IGHV4-61A0A0C4DH41 118 aa5.44□□□□□ -1.54
CPSF6-202ENST00000435070 HIGD2BQ4VC39 106 aa5.44□□□□□ -1.54
CPSF6-202ENST00000435070 WIPF1O43516 503 aa5.44□□□□□ -1.54
CPSF6-202ENST00000435070 SLPIP03973 132 aa5.44□□□□□ -1.54
CPSF6-202ENST00000435070 DEFB112Q30KQ8 113 aa5.44□□□□□ -1.54
CPSF6-202ENST00000435070 C9orf66Q5T8R8 295 aa5.44□□□□□ -1.54
CPSF6-202ENST00000435070 FAM104AQ969W3 186 aa5.44□□□□□ -1.54
CPSF6-202ENST00000435070 CCL24O00175 119 aa5.44□□□□□ -1.54
CPSF6-202ENST00000435070 Q5XG85 94 aa5.43□□□□□ -1.54
CPSF6-202ENST00000435070 NCR3O14931 201 aa5.43□□□□□ -1.54
CPSF6-202ENST00000435070 COX6A2Q02221 97 aa5.43□□□□□ -1.54
CPSF6-202ENST00000435070 APRG1Q8IVJ8 170 aa5.43□□□□□ -1.54
CPSF6-202ENST00000435070 KLLNB2CW77 178 aa5.43□□□□□ -1.54
CPSF6-202ENST00000435070 FHL2Q14192 279 aa5.43□□□□□ -1.54
CPSF6-202ENST00000435070 LINC01561Q8N1V8 128 aa5.43□□□□□ -1.54
CPSF6-202ENST00000435070 LINC00467Q9BRT7 94 aa5.43□□□□□ -1.54
CPSF6-202ENST00000435070 SONP18583 2426 aaKnown RBP5.43□□□□□ -1.54
CPSF6-202ENST00000435070 C4orf48Q5BLP8 95 aa5.43□□□□□ -1.54
CPSF6-202ENST00000435070 ETDCA0A1B0GVM5 59 aa5.42□□□□□ -1.54
CPSF6-202ENST00000435070 COX7B2Q8TF08 81 aa5.42□□□□□ -1.54
CPSF6-202ENST00000435070 UPK3BQ9BT76 320 aa5.42□□□□□ -1.54
CPSF6-202ENST00000435070 ESM1Q9NQ30 184 aa5.42□□□□□ -1.54
CPSF6-202ENST00000435070 SLURP1P55000 103 aa5.42□□□□□ -1.54
CPSF6-202ENST00000435070 DEFB113Q30KQ7 82 aa5.42□□□□□ -1.54
CPSF6-202ENST00000435070 NDUFA4O00483 81 aa5.42□□□□□ -1.54
CPSF6-202ENST00000435070 FAM222AQ5U5X8 452 aa5.42□□□□□ -1.54
CPSF6-202ENST00000435070 SMIM26A0A096LP01 95 aa5.41□□□□□ -1.54
CPSF6-202ENST00000435070 JMJD7-PLA2G4BH0Y9G9 81 aa5.41□□□□□ -1.54
CPSF6-202ENST00000435070 CCL18P55774 89 aa5.41□□□□□ -1.54
CPSF6-202ENST00000435070 BEAN1Q3B7T3 259 aa5.41□□□□□ -1.54
CPSF6-202ENST00000435070 A0A087WYN8 130 aa5.41□□□□□ -1.54
CPSF6-202ENST00000435070 C9orf85Q96MD7 179 aa5.41□□□□□ -1.54
CPSF6-202ENST00000435070 LINC00336Q6ZUF6 198 aa5.41□□□□□ -1.54
CPSF6-202ENST00000435070 IGLV10-54A0A075B6I4 117 aa5.41□□□□□ -1.54
CPSF6-202ENST00000435070 NDUFA1O15239 70 aa5.41□□□□□ -1.54
CPSF6-202ENST00000435070 Q6ZSN1 163 aa5.41□□□□□ -1.54
CPSF6-202ENST00000435070 SETD2Q9BYW2 2564 aaPredicted RBP5.41□□□□□ -1.54
CPSF6-202ENST00000435070 MYO9AB2RTY4 2548 aa5.41□□□□□ -1.54
CPSF6-202ENST00000435070 LECT2O14960 151 aa5.4□□□□□ -1.54
CPSF6-202ENST00000435070 Q8N9L7 120 aa5.4□□□□□ -1.54
CPSF6-202ENST00000435070 SIRPDQ9H106 197 aa5.4□□□□□ -1.54
CPSF6-202ENST00000435070 FAM19A1Q7Z5A9 133 aa5.4□□□□□ -1.54
CPSF6-202ENST00000435070 UBE2D4Q9Y2X8 147 aa5.4□□□□□ -1.54
CPSF6-202ENST00000435070 NDUFC1O43677 76 aa5.4□□□□□ -1.55
CPSF6-202ENST00000435070 A0A0J9YWU9 116 aa5.39□□□□□ -1.55
CPSF6-202ENST00000435070 H0YGX0 51 aa5.39□□□□□ -1.55
CPSF6-202ENST00000435070 GYPEP15421 78 aa5.39□□□□□ -1.55
CPSF6-202ENST00000435070 SPINT4Q6UDR6 99 aa5.39□□□□□ -1.55
CPSF6-202ENST00000435070 C5orf56Q8N8D9 126 aa5.39□□□□□ -1.55
CPSF6-202ENST00000435070 BPY2O14599 106 aa5.39□□□□□ -1.55
CPSF6-202ENST00000435070 DEFB4AO15263 64 aa5.39□□□□□ -1.55
CPSF6-202ENST00000435070 CHCHD7Q9BUK0 85 aa5.39□□□□□ -1.55
CPSF6-202ENST00000435070 JMJD1CQ15652 2540 aa5.39□□□□□ -1.55
CPSF6-202ENST00000435070 ZFHX3Q15911 3703 aa5.39□□□□□ -1.55
CPSF6-202ENST00000435070 RPL28P46779 137 aaKnown RBP5.39□□□□□ -1.55
CPSF6-202ENST00000435070 CAMK2N2Q96S95 79 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms