RNA–Protein interactions for RNA: ENST00000434517.1

TOP3B-205, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-205ENST00000434517 UBE2D1P51668 147 aa14.02□□□□□ -0.17
TOP3B-205ENST00000434517 C15orf56Q8N910 161 aa14.02□□□□□ -0.17
TOP3B-205ENST00000434517 IGHV1-58A0A0C4DH39 117 aa14.01□□□□□ -0.17
TOP3B-205ENST00000434517 C5orf38Q86SI9 138 aa14.01□□□□□ -0.17
TOP3B-205ENST00000434517 SERF1AO75920 110 aa14□□□□□ -0.17
TOP3B-205ENST00000434517 HIGD2BQ4VC39 106 aa14□□□□□ -0.17
TOP3B-205ENST00000434517 LINC00242Q5T6M2 205 aa14□□□□□ -0.17
TOP3B-205ENST00000434517 DNAH5Q8TE73 4624 aa14□□□□□ -0.17
TOP3B-205ENST00000434517 DYNC1H1Q14204 4646 aaKnown RBP14□□□□□ -0.17
TOP3B-205ENST00000434517 GCSHP23434 173 aa13.99□□□□□ -0.17
TOP3B-205ENST00000434517 PDZD11Q5EBL8 140 aa13.99□□□□□ -0.17
TOP3B-205ENST00000434517 ATP5LO75964 103 aa13.98□□□□□ -0.17
TOP3B-205ENST00000434517 NDUFA6P56556 154 aa13.98□□□□□ -0.17
TOP3B-205ENST00000434517 GVQW2A0A096LPI5 108 aaPredicted RBP13.97□□□□□ -0.17
TOP3B-205ENST00000434517 IGHV3OR16-9A0A0B4J2B5 98 aa13.97□□□□□ -0.17
TOP3B-205ENST00000434517 HIST1H2BKO60814 126 aa13.97□□□□□ -0.17
TOP3B-205ENST00000434517 APOMO95445 188 aa13.97□□□□□ -0.17
TOP3B-205ENST00000434517 HIST1H2BJP06899 126 aa13.97□□□□□ -0.17
TOP3B-205ENST00000434517 HIST1H2BOP23527 126 aa13.97□□□□□ -0.17
TOP3B-205ENST00000434517 HIST1H2BBP33778 126 aa13.97□□□□□ -0.17
TOP3B-205ENST00000434517 HIST1H2BDP58876 126 aa13.97□□□□□ -0.17
TOP3B-205ENST00000434517 HIST1H2BCP62807 126 aa13.97□□□□□ -0.17
TOP3B-205ENST00000434517 PMVKQ15126 192 aa13.97□□□□□ -0.17
TOP3B-205ENST00000434517 HIST2H2BEQ16778 126 aa13.97□□□□□ -0.17
TOP3B-205ENST00000434517 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.97□□□□□ -0.17
TOP3B-205ENST00000434517 FAM19A2Q8N3H0 131 aa13.97□□□□□ -0.17
TOP3B-205ENST00000434517 HIST1H2BHQ93079 126 aa13.97□□□□□ -0.17
TOP3B-205ENST00000434517 HIST1H2BNQ99877 126 aa13.97□□□□□ -0.17
TOP3B-205ENST00000434517 HIST1H2BMQ99879 126 aa13.97□□□□□ -0.17
TOP3B-205ENST00000434517 SEC11AP67812 179 aa13.96□□□□□ -0.17
TOP3B-205ENST00000434517 COX6A2Q02221 97 aa13.96□□□□□ -0.17
TOP3B-205ENST00000434517 CST9LQ9H4G1 147 aa13.96□□□□□ -0.17
TOP3B-205ENST00000434517 LINC00310P59036 64 aa13.95□□□□□ -0.18
TOP3B-205ENST00000434517 GEMIN7Q9H840 131 aaKnown RBP13.95□□□□□ -0.18
TOP3B-205ENST00000434517 A0A0J9YXV3 536 aa13.94□□□□□ -0.18
TOP3B-205ENST00000434517 ZNF561-AS1K7EIQ3 104 aa13.94□□□□□ -0.18
TOP3B-205ENST00000434517 HERVK_113P63121 156 aa13.94□□□□□ -0.18
TOP3B-205ENST00000434517 FAM19A3Q7Z5A8 133 aa13.94□□□□□ -0.18
TOP3B-205ENST00000434517 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.93□□□□□ -0.18
TOP3B-205ENST00000434517 KRTAP10-1P60331 282 aa13.93□□□□□ -0.18
TOP3B-205ENST00000434517 LINC01620Q4KN68 170 aa13.93□□□□□ -0.18
TOP3B-205ENST00000434517 A0A087WZ39 114 aa13.92□□□□□ -0.18
TOP3B-205ENST00000434517 CNBPP62633 177 aaKnown RBP13.92□□□□□ -0.18
TOP3B-205ENST00000434517 NUPR1O60356 82 aa13.91□□□□□ -0.18
TOP3B-205ENST00000434517 ORAOV1Q8WV07 137 aa13.91□□□□□ -0.18
TOP3B-205ENST00000434517 IFI27L1Q96BM0 104 aa13.91□□□□□ -0.18
TOP3B-205ENST00000434517 LINC00526Q96FQ7 95 aa13.91□□□□□ -0.18
TOP3B-205ENST00000434517 IGHV3-64A0A075B6Q5 118 aa13.9□□□□□ -0.18
TOP3B-205ENST00000434517 TINCRA0A1B0GVN0 87 aa13.9□□□□□ -0.18
TOP3B-205ENST00000434517 SPAG11BQ08648 103 aa13.9□□□□□ -0.18
TOP3B-205ENST00000434517 OR10D4PQ8NGN7 298 aa13.9□□□□□ -0.18
TOP3B-205ENST00000434517 KRTAP4-5Q9BYR2 181 aa13.9□□□□□ -0.18
TOP3B-205ENST00000434517 LRP1BQ9NZR2 4599 aa13.9□□□□□ -0.18
TOP3B-205ENST00000434517 IGLV4-69A0A075B6H9 119 aa13.89□□□□□ -0.19
TOP3B-205ENST00000434517 LEPROTL1O95214 131 aa13.89□□□□□ -0.19
TOP3B-205ENST00000434517 SLPIP03973 132 aa13.89□□□□□ -0.19
TOP3B-205ENST00000434517 LINC00469Q8N7U9 141 aa13.89□□□□□ -0.19
TOP3B-205ENST00000434517 LINC01561Q8N1V8 128 aa13.88□□□□□ -0.19
TOP3B-205ENST00000434517 C9orf163Q8N9P6 203 aa13.88□□□□□ -0.19
TOP3B-205ENST00000434517 PACRGQ96M98 296 aaPredicted RBP13.88□□□□□ -0.19
TOP3B-205ENST00000434517 CDKN2A-AS1Q9UH64 79 aa13.88□□□□□ -0.19
TOP3B-205ENST00000434517 FABP4P15090 132 aa13.86□□□□□ -0.19
TOP3B-205ENST00000434517 CARD19Q96LW7 228 aa13.86□□□□□ -0.19
TOP3B-205ENST00000434517 CAMK2N2Q96S95 79 aa13.86□□□□□ -0.19
TOP3B-205ENST00000434517 CHAC1Q9BUX1 264 aa13.86□□□□□ -0.19
TOP3B-205ENST00000434517 HSPB8Q9UJY1 196 aa13.86□□□□□ -0.19
TOP3B-205ENST00000434517 IGLC3P0DOY3 106 aa13.85□□□□□ -0.19
TOP3B-205ENST00000434517 SYCNQ0VAF6 134 aa13.85□□□□□ -0.19
TOP3B-205ENST00000434517 CHTOPQ9Y3Y2 248 aaKnown RBP13.85□□□□□ -0.19
TOP3B-205ENST00000434517 H0Y8G0 127 aa13.84□□□□□ -0.19
TOP3B-205ENST00000434517 C2orf48Q96LS8 159 aa13.84□□□□□ -0.19
TOP3B-205ENST00000434517 IGLV5-45A0A087WSX0 123 aa13.83□□□□□ -0.2
TOP3B-205ENST00000434517 TRAV12-1A0A0B4J245 112 aa13.83□□□□□ -0.2
TOP3B-205ENST00000434517 H3BRM9 83 aa13.82□□□□□ -0.2
TOP3B-205ENST00000434517 CDK2AP2O75956 126 aa13.82□□□□□ -0.2
TOP3B-205ENST00000434517 PRSS2P07478 247 aa13.82□□□□□ -0.2
TOP3B-205ENST00000434517 TOMM7Q9P0U1 55 aa13.82□□□□□ -0.2
TOP3B-205ENST00000434517 HERC1Q15751 4861 aa13.81□□□□□ -0.2
TOP3B-205ENST00000434517 Q6ZRU5 148 aa13.81□□□□□ -0.2
TOP3B-205ENST00000434517 F8WDY8 70 aa13.8□□□□□ -0.2
TOP3B-205ENST00000434517 NDUFA1O15239 70 aa13.8□□□□□ -0.2
TOP3B-205ENST00000434517 COA6Q5JTJ3 125 aaKnown RBP13.8□□□□□ -0.2
TOP3B-205ENST00000434517 C11orf86A6NJI1 115 aa13.79□□□□□ -0.2
TOP3B-205ENST00000434517 SMIM1B2RUZ4 78 aa13.79□□□□□ -0.2
TOP3B-205ENST00000434517 SPINK8P0C7L1 97 aa13.79□□□□□ -0.2
TOP3B-205ENST00000434517 ZNF22P17026 224 aaPredicted RBP13.79□□□□□ -0.2
TOP3B-205ENST00000434517 FAM30AQ9NZY2 134 aa13.79□□□□□ -0.2
TOP3B-205ENST00000434517 F8VRH5 84 aa13.78□□□□□ -0.2
TOP3B-205ENST00000434517 KIAA0087Q14695 138 aa13.78□□□□□ -0.2
TOP3B-205ENST00000434517 TMEM170BQ5T4T1 132 aa13.78□□□□□ -0.2
TOP3B-205ENST00000434517 SDIM1Q6ZPB5 146 aa13.78□□□□□ -0.2
TOP3B-205ENST00000434517 MRPL35Q9NZE8 188 aaKnown RBP13.78□□□□□ -0.2
TOP3B-205ENST00000434517 C6orf226Q5I0X4 101 aa13.77□□□□□ -0.21
TOP3B-205ENST00000434517 Q6ZSA8 131 aa13.77□□□□□ -0.21
TOP3B-205ENST00000434517 Q8IZM0 81 aa13.77□□□□□ -0.21
TOP3B-205ENST00000434517 MAP1LC3CQ9BXW4 147 aa13.77□□□□□ -0.21
TOP3B-205ENST00000434517 PKIGQ9Y2B9 76 aa13.77□□□□□ -0.21
TOP3B-205ENST00000434517 HSPG2P98160 4391 aa13.77□□□□□ -0.21
TOP3B-205ENST00000434517 APOBP04114 4563 aaKnown RBP13.76□□□□□ -0.21
TOP3B-205ENST00000434517 DNAH8Q96JB1 4490 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms