RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 hDV102S1A0JD36 115 aa11.9□□□□□ -0.5
HLA-F-220ENST00000434407 LINC01620Q4KN68 170 aa11.9□□□□□ -0.5
HLA-F-220ENST00000434407 C2orf66Q6UXQ4 117 aa11.9□□□□□ -0.5
HLA-F-220ENST00000434407 C9orf163Q8N9P6 203 aa11.9□□□□□ -0.5
HLA-F-220ENST00000434407 CYSLTR1Q9Y271 337 aa11.9□□□□□ -0.5
HLA-F-220ENST00000434407 IGLV4-3A0A075B6K6 122 aa11.89□□□□□ -0.51
HLA-F-220ENST00000434407 GVQW2A0A096LPI5 108 aaPredicted RBP11.89□□□□□ -0.51
HLA-F-220ENST00000434407 TRAV13-1A0A0B4J241 112 aa11.89□□□□□ -0.51
HLA-F-220ENST00000434407 SLPIP03973 132 aa11.89□□□□□ -0.51
HLA-F-220ENST00000434407 NPSP0C0P6 89 aa11.88□□□□□ -0.51
HLA-F-220ENST00000434407 FAT1Q14517 4588 aa11.87□□□□□ -0.51
HLA-F-220ENST00000434407 IGIPA6NJ69 53 aa11.87□□□□□ -0.51
HLA-F-220ENST00000434407 G0S2P27469 103 aa11.87□□□□□ -0.51
HLA-F-220ENST00000434407 PRSS3P2Q8NHM4 247 aa11.87□□□□□ -0.51
HLA-F-220ENST00000434407 TMEM141Q96I45 108 aa11.87□□□□□ -0.51
HLA-F-220ENST00000434407 IGHV1-58A0A0C4DH39 117 aa11.86□□□□□ -0.51
HLA-F-220ENST00000434407 SNRPEP62304 92 aaKnown RBP11.86□□□□□ -0.51
HLA-F-220ENST00000434407 Q8N1X5 172 aa11.86□□□□□ -0.51
HLA-F-220ENST00000434407 TOMM6Q96B49 74 aa11.86□□□□□ -0.51
HLA-F-220ENST00000434407 AP5S1Q9NUS5 200 aa11.86□□□□□ -0.51
HLA-F-220ENST00000434407 BAGE3Q86Y29 109 aa11.85□□□□□ -0.51
HLA-F-220ENST00000434407 AMELXQ99217 191 aa11.85□□□□□ -0.51
HLA-F-220ENST00000434407 IGHV3OR16-9A0A0B4J2B5 98 aa11.84□□□□□ -0.51
HLA-F-220ENST00000434407 C5orf52A6NGY3 159 aa11.84□□□□□ -0.51
HLA-F-220ENST00000434407 IFITM10A6NMD0 228 aa11.84□□□□□ -0.51
HLA-F-220ENST00000434407 COX7A2LO14548 114 aa11.84□□□□□ -0.51
HLA-F-220ENST00000434407 HIGD2BQ4VC39 106 aa11.84□□□□□ -0.51
HLA-F-220ENST00000434407 COA6Q5JTJ3 125 aaKnown RBP11.84□□□□□ -0.51
HLA-F-220ENST00000434407 SDIM1Q6ZPB5 146 aa11.84□□□□□ -0.51
HLA-F-220ENST00000434407 LINC00173Q6ZV60 143 aa11.84□□□□□ -0.51
HLA-F-220ENST00000434407 C18orf32Q8TCD1 76 aa11.83□□□□□ -0.52
HLA-F-220ENST00000434407 TIMM17AQ99595 171 aa11.83□□□□□ -0.52
HLA-F-220ENST00000434407 KRTAP4-5Q9BYR2 181 aa11.83□□□□□ -0.52
HLA-F-220ENST00000434407 VPS13BQ7Z7G8 4022 aa11.83□□□□□ -0.52
HLA-F-220ENST00000434407 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.82□□□□□ -0.52
HLA-F-220ENST00000434407 TEX43Q6ZNM6 134 aa11.82□□□□□ -0.52
HLA-F-220ENST00000434407 LINC01549A6NIU2 74 aa11.81□□□□□ -0.52
HLA-F-220ENST00000434407 UBE2D1P51668 147 aa11.81□□□□□ -0.52
HLA-F-220ENST00000434407 HAMPP81172 84 aa11.81□□□□□ -0.52
HLA-F-220ENST00000434407 LINC00242Q5T6M2 205 aa11.81□□□□□ -0.52
HLA-F-220ENST00000434407 FA2HQ7L5A8 372 aa11.81□□□□□ -0.52
HLA-F-220ENST00000434407 C5orf38Q86SI9 138 aa11.81□□□□□ -0.52
HLA-F-220ENST00000434407 Q6ZN92 141 aa11.8□□□□□ -0.52
HLA-F-220ENST00000434407 ERASQ7Z444 233 aa11.8□□□□□ -0.52
HLA-F-220ENST00000434407 URB1-AS1Q96HZ7 61 aa11.8□□□□□ -0.52
HLA-F-220ENST00000434407 CHAC1Q9BUX1 264 aa11.8□□□□□ -0.52
HLA-F-220ENST00000434407 VCX2Q9H322 139 aa11.8□□□□□ -0.52
HLA-F-220ENST00000434407 IGHV3-64A0A075B6Q5 118 aa11.79□□□□□ -0.52
HLA-F-220ENST00000434407 MALP21145 153 aa11.79□□□□□ -0.52
HLA-F-220ENST00000434407 PAPPA-AS1Q5QFB9 102 aa11.79□□□□□ -0.52
HLA-F-220ENST00000434407 ZC2HC1BQ5TFG8 222 aa11.79□□□□□ -0.52
HLA-F-220ENST00000434407 FAM19A3Q7Z5A8 133 aa11.79□□□□□ -0.52
HLA-F-220ENST00000434407 C2orf88Q9BSF0 95 aa11.79□□□□□ -0.52
HLA-F-220ENST00000434407 ABCA13Q86UQ4 5058 aa11.79□□□□□ -0.52
HLA-F-220ENST00000434407 LOC105371267A0A1B0GV96 52 aa11.78□□□□□ -0.52
HLA-F-220ENST00000434407 SERF1AO75920 110 aa11.78□□□□□ -0.52
HLA-F-220ENST00000434407 CIRBPQ14011 172 aaKnown RBP11.78□□□□□ -0.52
HLA-F-220ENST00000434407 SCXQ7RTU7 201 aa11.78□□□□□ -0.52
HLA-F-220ENST00000434407 SCGB3A1Q96QR1 104 aa11.78□□□□□ -0.52
HLA-F-220ENST00000434407 PCLOQ9Y6V0 5065 aa11.77□□□□□ -0.53
HLA-F-220ENST00000434407 ZNF561-AS1K7EIQ3 104 aa11.77□□□□□ -0.53
HLA-F-220ENST00000434407 APOMO95445 188 aa11.77□□□□□ -0.53
HLA-F-220ENST00000434407 LINC00614P0C842 121 aa11.77□□□□□ -0.53
HLA-F-220ENST00000434407 S100A2P29034 98 aa11.77□□□□□ -0.53
HLA-F-220ENST00000434407 COX6A2Q02221 97 aa11.77□□□□□ -0.53
HLA-F-220ENST00000434407 HIST3H2BBQ8N257 126 aa11.77□□□□□ -0.53
HLA-F-220ENST00000434407 LINC00526Q96FQ7 95 aa11.77□□□□□ -0.53
HLA-F-220ENST00000434407 A0A087WZ39 114 aa11.76□□□□□ -0.53
HLA-F-220ENST00000434407 A0A096LNJ9 63 aa11.76□□□□□ -0.53
HLA-F-220ENST00000434407 NUPR1O60356 82 aa11.76□□□□□ -0.53
HLA-F-220ENST00000434407 OR10D4PQ8NGN7 298 aa11.76□□□□□ -0.53
HLA-F-220ENST00000434407 CIRBP-AS1Q8TBR5 109 aa11.76□□□□□ -0.53
HLA-F-220ENST00000434407 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.76□□□□□ -0.53
HLA-F-220ENST00000434407 IGLV4-69A0A075B6H9 119 aa11.75□□□□□ -0.53
HLA-F-220ENST00000434407 PANO1I0J062 215 aa11.75□□□□□ -0.53
HLA-F-220ENST00000434407 SMR3BP02814 79 aaPredicted RBP11.75□□□□□ -0.53
HLA-F-220ENST00000434407 PDZD11Q5EBL8 140 aa11.75□□□□□ -0.53
HLA-F-220ENST00000434407 LINC01561Q8N1V8 128 aa11.75□□□□□ -0.53
HLA-F-220ENST00000434407 CHCHD1Q96BP2 118 aaKnown RBP11.75□□□□□ -0.53
HLA-F-220ENST00000434407 C2orf48Q96LS8 159 aa11.75□□□□□ -0.53
HLA-F-220ENST00000434407 SRRM2Q9UQ35 2752 aaKnown RBP11.74□□□□□ -0.53
HLA-F-220ENST00000434407 LINC00310P59036 64 aa11.74□□□□□ -0.53
HLA-F-220ENST00000434407 SYCNQ0VAF6 134 aa11.74□□□□□ -0.53
HLA-F-220ENST00000434407 CARD19Q96LW7 228 aa11.74□□□□□ -0.53
HLA-F-220ENST00000434407 EPM2AB3EWF7 344 aa11.73□□□□□ -0.53
HLA-F-220ENST00000434407 HSBP1O75506 76 aa11.72□□□□□ -0.53
HLA-F-220ENST00000434407 SEC11AP67812 179 aa11.72□□□□□ -0.53
HLA-F-220ENST00000434407 SPAG11BQ08648 103 aa11.72□□□□□ -0.53
HLA-F-220ENST00000434407 F8WDY8 70 aa11.71□□□□□ -0.53
HLA-F-220ENST00000434407 Q5VSD8 79 aa11.71□□□□□ -0.53
HLA-F-220ENST00000434407 ORAOV1Q8WV07 137 aa11.71□□□□□ -0.53
HLA-F-220ENST00000434407 HBDP02042 147 aa11.7□□□□□ -0.54
HLA-F-220ENST00000434407 FABP4P15090 132 aa11.7□□□□□ -0.54
HLA-F-220ENST00000434407 HERVK_113P63121 156 aa11.7□□□□□ -0.54
HLA-F-220ENST00000434407 KIAA0087Q14695 138 aa11.7□□□□□ -0.54
HLA-F-220ENST00000434407 Q6ZRU5 148 aa11.7□□□□□ -0.54
HLA-F-220ENST00000434407 SPACA4Q8TDM5 124 aa11.7□□□□□ -0.54
HLA-F-220ENST00000434407 HIST1H2BLQ99880 126 aa11.7□□□□□ -0.54
HLA-F-220ENST00000434407 CST9LQ9H4G1 147 aa11.7□□□□□ -0.54
HLA-F-220ENST00000434407 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms