RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 A0A087WVE0 104 aa0.37□□□□□ -2.35
PTPN4-205ENST00000433888 COL5A1-AS1Q5SY13 56 aa0.37□□□□□ -2.35
PTPN4-205ENST00000433888 SNHG12Q9BXW3 62 aa0.37□□□□□ -2.35
PTPN4-205ENST00000433888 CACFD1Q9UGQ2 172 aa0.37□□□□□ -2.35
PTPN4-205ENST00000433888 MARF1Q9Y4F3 1742 aaKnown RBP0.37□□□□□ -2.35
PTPN4-205ENST00000433888 ABCC10Q5T3U5 1492 aa0.36□□□□□ -2.35
PTPN4-205ENST00000433888 LRRC37A2A6NM11 1700 aa0.36□□□□□ -2.35
PTPN4-205ENST00000433888 ANKRD36BQ8N2N9 1353 aa0.36□□□□□ -2.35
PTPN4-205ENST00000433888 A0A0D9SFI3 127 aa0.36□□□□□ -2.35
PTPN4-205ENST00000433888 C7orf77A4D0Y5 90 aa0.36□□□□□ -2.35
PTPN4-205ENST00000433888 KRTAP21-1Q3LI58 79 aa0.36□□□□□ -2.35
PTPN4-205ENST00000433888 SPRR4Q96PI1 79 aa0.36□□□□□ -2.35
PTPN4-205ENST00000433888 EHBP1L1Q8N3D4 1523 aa0.36□□□□□ -2.35
PTPN4-205ENST00000433888 AKAP12Q02952 1782 aa0.36□□□□□ -2.35
PTPN4-205ENST00000433888 SYNE1Q8NF91 8797 aaKnown RBP0.36□□□□□ -2.35
PTPN4-205ENST00000433888 S100A3P33764 101 aa0.35□□□□□ -2.35
PTPN4-205ENST00000433888 PKIAP61925 76 aa0.35□□□□□ -2.35
PTPN4-205ENST00000433888 DEFB107AQ8IZN7 70 aa0.35□□□□□ -2.35
PTPN4-205ENST00000433888 LINC01600Q96MT4 127 aa0.35□□□□□ -2.35
PTPN4-205ENST00000433888 VAMP8Q9BV40 100 aa0.35□□□□□ -2.35
PTPN4-205ENST00000433888 CNFNQ9BYD5 112 aa0.35□□□□□ -2.35
PTPN4-205ENST00000433888 DPY30Q9C005 99 aa0.35□□□□□ -2.35
PTPN4-205ENST00000433888 TP53AIP1Q9HCN2 124 aa0.35□□□□□ -2.35
PTPN4-205ENST00000433888 SPCS1Q9Y6A9 102 aa0.35□□□□□ -2.35
PTPN4-205ENST00000433888 ADGRL2O95490 1459 aa0.35□□□□□ -2.35
PTPN4-205ENST00000433888 USP24Q9UPU5 2620 aa0.34□□□□□ -2.35
PTPN4-205ENST00000433888 ARHGEF12Q9NZN5 1544 aa0.34□□□□□ -2.35
PTPN4-205ENST00000433888 CFDP00746 253 aaPredicted RBP0.34□□□□□ -2.36
PTPN4-205ENST00000433888 S100A8P05109 93 aa0.34□□□□□ -2.36
PTPN4-205ENST00000433888 KNDC1Q76NI1 1749 aa0.34□□□□□ -2.36
PTPN4-205ENST00000433888 TMEM263Q8WUH6 116 aaKnown RBP0.34□□□□□ -2.36
PTPN4-205ENST00000433888 NLRP1Q9C000 1473 aa0.34□□□□□ -2.36
PTPN4-205ENST00000433888 ABCA12Q86UK0 2595 aa0.34□□□□□ -2.36
PTPN4-205ENST00000433888 KCPQ6ZWJ8 1503 aa0.33□□□□□ -2.36
PTPN4-205ENST00000433888 I3L2K1 104 aa0.33□□□□□ -2.36
PTPN4-205ENST00000433888 Q5BKY6 102 aa0.33□□□□□ -2.36
PTPN4-205ENST00000433888 TRGV9Q99603 122 aa0.33□□□□□ -2.36
PTPN4-205ENST00000433888 RAPGEF6Q8TEU7 1601 aa0.33□□□□□ -2.36
PTPN4-205ENST00000433888 PIEZO1Q92508 2521 aa0.32□□□□□ -2.36
PTPN4-205ENST00000433888 PHGR1C9JFL3 82 aa0.32□□□□□ -2.36
PTPN4-205ENST00000433888 H7BZZ5 65 aa0.32□□□□□ -2.36
PTPN4-205ENST00000433888 ATOX1O00244 68 aa0.32□□□□□ -2.36
PTPN4-205ENST00000433888 SPINK1P00995 79 aa0.32□□□□□ -2.36
PTPN4-205ENST00000433888 LINC00032P0C843 101 aa0.32□□□□□ -2.36
PTPN4-205ENST00000433888 SAA2P0DJI9 122 aaPredicted RBP0.32□□□□□ -2.36
PTPN4-205ENST00000433888 PSMG4Q5JS54 123 aa0.32□□□□□ -2.36
PTPN4-205ENST00000433888 Q8IZM0 81 aa0.32□□□□□ -2.36
PTPN4-205ENST00000433888 CRIPTQ9P021 101 aa0.32□□□□□ -2.36
PTPN4-205ENST00000433888 POLA1P09884 1462 aaPredicted RBP0.32□□□□□ -2.36
PTPN4-205ENST00000433888 PLEKHH2Q8IVE3 1493 aa0.32□□□□□ -2.36
PTPN4-205ENST00000433888 MLH3Q9UHC1 1453 aa0.32□□□□□ -2.36
PTPN4-205ENST00000433888 NUP188Q5SRE5 1749 aa0.32□□□□□ -2.36
PTPN4-205ENST00000433888 F8P00451 2351 aa0.32□□□□□ -2.36
PTPN4-205ENST00000433888 TPRP12270 2363 aaKnown RBP0.32□□□□□ -2.36
PTPN4-205ENST00000433888 PLCE1Q9P212 2302 aa0.31□□□□□ -2.36
PTPN4-205ENST00000433888 C1orf167Q5SNV9 1468 aa0.31□□□□□ -2.36
PTPN4-205ENST00000433888 ANKRD26Q9UPS8 1709 aa0.31□□□□□ -2.36
PTPN4-205ENST00000433888 TRBV25-1A0A075B6N4 114 aa0.31□□□□□ -2.36
PTPN4-205ENST00000433888 TRBV6-1A0A0K0K1D8 114 aa0.31□□□□□ -2.36
PTPN4-205ENST00000433888 LINC00959A0A1B0GUT2 108 aa0.31□□□□□ -2.36
PTPN4-205ENST00000433888 UQCRHP07919 91 aa0.31□□□□□ -2.36
PTPN4-205ENST00000433888 PMCHL1Q16048 86 aa0.31□□□□□ -2.36
PTPN4-205ENST00000433888 SERP2Q8N6R1 65 aa0.31□□□□□ -2.36
PTPN4-205ENST00000433888 PRO1933Q9H354 126 aa0.31□□□□□ -2.36
PTPN4-205ENST00000433888 IGF2RP11717 2491 aa0.31□□□□□ -2.36
PTPN4-205ENST00000433888 CELSR1Q9NYQ6 3014 aa0.31□□□□□ -2.36
PTPN4-205ENST00000433888 FAT4Q6V0I7 4981 aa0.31□□□□□ -2.36
PTPN4-205ENST00000433888 CACNA1EQ15878 2313 aa0.31□□□□□ -2.36
PTPN4-205ENST00000433888 PAPPAQ13219 1627 aa0.31□□□□□ -2.36
PTPN4-205ENST00000433888 CCNB3Q8WWL7 1395 aa0.31□□□□□ -2.36
PTPN4-205ENST00000433888 NAV2Q8IVL1 2488 aa0.3□□□□□ -2.36
PTPN4-205ENST00000433888 SYS1-DBNDD2H3BUS1 97 aa0.3□□□□□ -2.36
PTPN4-205ENST00000433888 PSENENQ9NZ42 101 aa0.3□□□□□ -2.36
PTPN4-205ENST00000433888 AHCTF1Q8WYP5 2266 aa0.3□□□□□ -2.36
PTPN4-205ENST00000433888 MRC2Q9UBG0 1479 aa0.29□□□□□ -2.36
PTPN4-205ENST00000433888 NRXN1Q9ULB1 1477 aa0.29□□□□□ -2.36
PTPN4-205ENST00000433888 PRDM15P57071 1507 aaPredicted RBP0.29□□□□□ -2.36
PTPN4-205ENST00000433888 BIVM-ERCC5R4GMW8 1640 aa0.29□□□□□ -2.36
PTPN4-205ENST00000433888 UQCRHLA0A096LP55 91 aa0.29□□□□□ -2.36
PTPN4-205ENST00000433888 NDUFC1O43677 76 aa0.29□□□□□ -2.36
PTPN4-205ENST00000433888 GNGT1P63211 74 aa0.29□□□□□ -2.36
PTPN4-205ENST00000433888 Q9H521 79 aa0.29□□□□□ -2.36
PTPN4-205ENST00000433888 HIGD1BQ9P298 99 aa0.29□□□□□ -2.36
PTPN4-205ENST00000433888 FAM208BQ5VWN6 2430 aa0.29□□□□□ -2.36
PTPN4-205ENST00000433888 MAST4O15021 2626 aa0.29□□□□□ -2.36
PTPN4-205ENST00000433888 USF3Q68DE3 2245 aa0.29□□□□□ -2.36
PTPN4-205ENST00000433888 FYCO1Q9BQS8 1478 aa0.29□□□□□ -2.36
PTPN4-205ENST00000433888 ANKRD36A6QL64 1941 aa0.28□□□□□ -2.36
PTPN4-205ENST00000433888 GPR98Q8WXG9 6306 aa0.28□□□□□ -2.36
PTPN4-205ENST00000433888 MON2Q7Z3U7 1717 aa0.28□□□□□ -2.36
PTPN4-205ENST00000433888 PAPPA2Q9BXP8 1791 aa0.28□□□□□ -2.36
PTPN4-205ENST00000433888 A0A1B0GU69 56 aa0.28□□□□□ -2.36
PTPN4-205ENST00000433888 F8WEM9 126 aa0.28□□□□□ -2.36
PTPN4-205ENST00000433888 ARMS2P0C7Q2 107 aa0.28□□□□□ -2.36
PTPN4-205ENST00000433888 PIGYQ3MUY2 71 aa0.28□□□□□ -2.36
PTPN4-205ENST00000433888 C20orf78Q9BR46 151 aa0.28□□□□□ -2.36
PTPN4-205ENST00000433888 FXYD6Q9H0Q3 95 aa0.28□□□□□ -2.36
PTPN4-205ENST00000433888 VPS8Q8N3P4 1428 aa0.28□□□□□ -2.37
PTPN4-205ENST00000433888 TEX14Q8IWB6 1497 aa0.28□□□□□ -2.37
PTPN4-205ENST00000433888 MAGI1Q96QZ7 1491 aaPredicted RBP0.28□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms