RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 MGPP08493 103 aa-1.47□□□□□ -2.64
LINC01239-201ENST00000433645 PFDN5Q99471 154 aa-1.47□□□□□ -2.64
LINC01239-201ENST00000433645 TCHHQ07283 1943 aa-1.47□□□□□ -2.64
LINC01239-201ENST00000433645 ARPC4P59998 168 aa-1.48□□□□□ -2.65
LINC01239-201ENST00000433645 MYH7P12883 1935 aa-1.48□□□□□ -2.65
LINC01239-201ENST00000433645 MAGI1Q96QZ7 1491 aaPredicted RBP-1.49□□□□□ -2.65
LINC01239-201ENST00000433645 PPP3R2Q96LZ3 170 aa-1.49□□□□□ -2.65
LINC01239-201ENST00000433645 SPRR4Q96PI1 79 aa-1.49□□□□□ -2.65
LINC01239-201ENST00000433645 NAA60Q9H7X0 242 aa-1.49□□□□□ -2.65
LINC01239-201ENST00000433645 SHROOM2Q13796 1616 aa-1.49□□□□□ -2.65
LINC01239-201ENST00000433645 SETBP1Q9Y6X0 1596 aa-1.5□□□□□ -2.65
LINC01239-201ENST00000433645 COX8AP10176 69 aa-1.5□□□□□ -2.65
LINC01239-201ENST00000433645 MT4P47944 62 aa-1.5□□□□□ -2.65
LINC01239-201ENST00000433645 KLK9Q2XQG4 91 aa-1.5□□□□□ -2.65
LINC01239-201ENST00000433645 SPANXDQ9BXN6 97 aa-1.5□□□□□ -2.65
LINC01239-201ENST00000433645 CPSF1Q10570 1443 aaKnown RBP-1.5□□□□□ -2.65
LINC01239-201ENST00000433645 MRPL54Q6P161 138 aaKnown RBP-1.51□□□□□ -2.65
LINC01239-201ENST00000433645 ARHGEF5Q12774 1597 aa-1.51□□□□□ -2.65
LINC01239-201ENST00000433645 LINC00959A0A1B0GUT2 108 aa-1.52□□□□□ -2.65
LINC01239-201ENST00000433645 BTG2P78543 158 aa-1.52□□□□□ -2.65
LINC01239-201ENST00000433645 C10orf113Q5VZT2 155 aa-1.52□□□□□ -2.65
LINC01239-201ENST00000433645 TSLPQ969D9 159 aa-1.52□□□□□ -2.65
LINC01239-201ENST00000433645 USMG5Q96IX5 58 aa-1.52□□□□□ -2.65
LINC01239-201ENST00000433645 SMG6Q86US8 1419 aaKnown RBP-1.52□□□□□ -2.65
LINC01239-201ENST00000433645 EPG5Q9HCE0 2579 aa-1.53□□□□□ -2.65
LINC01239-201ENST00000433645 SSSCA1O60232 199 aa-1.53□□□□□ -2.65
LINC01239-201ENST00000433645 WHAMMP3Q1A5X7 153 aa-1.53□□□□□ -2.65
LINC01239-201ENST00000433645 USH2AO75445 5202 aa-1.54□□□□□ -2.66
LINC01239-201ENST00000433645 SYS1-DBNDD2H3BUS1 97 aa-1.54□□□□□ -2.66
LINC01239-201ENST00000433645 COMMD6Q7Z4G1 85 aa-1.54□□□□□ -2.66
LINC01239-201ENST00000433645 NXT2Q9NPJ8 142 aaKnown RBP-1.54□□□□□ -2.66
LINC01239-201ENST00000433645 FAIMQ9NVQ4 179 aa-1.54□□□□□ -2.66
LINC01239-201ENST00000433645 SELENOWP63302 87 aa-1.55□□□□□ -2.66
LINC01239-201ENST00000433645 Q56UQ5 140 aa-1.55□□□□□ -2.66
LINC01239-201ENST00000433645 C8orf59Q8N0T1 100 aaPredicted RBP-1.55□□□□□ -2.66
LINC01239-201ENST00000433645 FOCADQ5VW36 1801 aa-1.55□□□□□ -2.66
LINC01239-201ENST00000433645 A0A0G2JMZ2 1700 aa-1.55□□□□□ -2.66
LINC01239-201ENST00000433645 DNAH6Q9C0G6 4158 aa-1.55□□□□□ -2.66
LINC01239-201ENST00000433645 PHLPP1O60346 1717 aa-1.56□□□□□ -2.66
LINC01239-201ENST00000433645 IFNGP01579 166 aa-1.56□□□□□ -2.66
LINC01239-201ENST00000433645 IGLC1P0CG04 106 aa-1.56□□□□□ -2.66
LINC01239-201ENST00000433645 DEFB135Q30KP9 77 aa-1.56□□□□□ -2.66
LINC01239-201ENST00000433645 TET3O43151 1660 aa-1.56□□□□□ -2.66
LINC01239-201ENST00000433645 STARD9Q9P2P6 4700 aa-1.57□□□□□ -2.66
LINC01239-201ENST00000433645 NBPF19A0A087WUL8 3843 aa-1.57□□□□□ -2.66
LINC01239-201ENST00000433645 FMN2Q9NZ56 1722 aa-1.57□□□□□ -2.66
LINC01239-201ENST00000433645 C5orf38Q86SI9 138 aa-1.57□□□□□ -2.66
LINC01239-201ENST00000433645 MYOZ3Q8TDC0 251 aa-1.57□□□□□ -2.66
LINC01239-201ENST00000433645 CDC42SE2Q9NRR3 84 aa-1.57□□□□□ -2.66
LINC01239-201ENST00000433645 NEBP20929 6669 aa-1.57□□□□□ -2.66
LINC01239-201ENST00000433645 HMGXB3Q12766 1538 aa-1.57□□□□□ -2.66
LINC01239-201ENST00000433645 QRICH2Q9H0J4 1663 aa-1.58□□□□□ -2.66
LINC01239-201ENST00000433645 MEIG1Q5JSS6 88 aa-1.58□□□□□ -2.66
LINC01239-201ENST00000433645 ARL11Q969Q4 196 aa-1.58□□□□□ -2.66
LINC01239-201ENST00000433645 FAM167A-AS1Q96KT0 104 aa-1.58□□□□□ -2.66
LINC01239-201ENST00000433645 PAPPA2Q9BXP8 1791 aa-1.58□□□□□ -2.66
LINC01239-201ENST00000433645 SPTBN4Q9H254 2564 aa-1.58□□□□□ -2.66
LINC01239-201ENST00000433645 HIVEP1P15822 2718 aa-1.59□□□□□ -2.66
LINC01239-201ENST00000433645 MIF4GDA9UHW6 222 aaKnown RBP-1.59□□□□□ -2.66
LINC01239-201ENST00000433645 CHKB-CPT1BH3BT56 60 aa-1.59□□□□□ -2.66
LINC01239-201ENST00000433645 UBA52P62987 128 aaKnown RBP-1.59□□□□□ -2.66
LINC01239-201ENST00000433645 LINC01600Q96MT4 127 aa-1.59□□□□□ -2.66
LINC01239-201ENST00000433645 LINC00470Q9BZP3 86 aa-1.59□□□□□ -2.66
LINC01239-201ENST00000433645 UQCR10Q9UDW1 63 aa-1.59□□□□□ -2.66
LINC01239-201ENST00000433645 NAIPQ13075 1403 aa-1.59□□□□□ -2.66
LINC01239-201ENST00000433645 XRN1Q8IZH2 1706 aaKnown RBP-1.6□□□□□ -2.67
LINC01239-201ENST00000433645 PKD1P98161 4303 aa-1.6□□□□□ -2.67
LINC01239-201ENST00000433645 APOC2P02655 101 aa-1.6□□□□□ -2.67
LINC01239-201ENST00000433645 UNC13AQ9UPW8 1703 aa-1.6□□□□□ -2.67
LINC01239-201ENST00000433645 EHBP1L1Q8N3D4 1523 aa-1.61□□□□□ -2.67
LINC01239-201ENST00000433645 TACC2O95359 2948 aa-1.61□□□□□ -2.67
LINC01239-201ENST00000433645 LOC105371267A0A1B0GV96 52 aa-1.61□□□□□ -2.67
LINC01239-201ENST00000433645 PRO1933Q9H354 126 aa-1.61□□□□□ -2.67
LINC01239-201ENST00000433645 SPG11Q96JI7 2443 aa-1.61□□□□□ -2.67
LINC01239-201ENST00000433645 C1orf167Q5SNV9 1468 aa-1.62□□□□□ -2.67
LINC01239-201ENST00000433645 FAM25AB3EWG3 89 aa-1.62□□□□□ -2.67
LINC01239-201ENST00000433645 FAM25CB3EWG5 89 aa-1.62□□□□□ -2.67
LINC01239-201ENST00000433645 FAM25GB3EWG6 89 aa-1.62□□□□□ -2.67
LINC01239-201ENST00000433645 CATR1Q13166 79 aa-1.62□□□□□ -2.67
LINC01239-201ENST00000433645 FAM223AQ8IWN6 122 aa-1.62□□□□□ -2.67
LINC01239-201ENST00000433645 APLNQ9ULZ1 77 aa-1.62□□□□□ -2.67
LINC01239-201ENST00000433645 NBASA2RRP1 2371 aa-1.62□□□□□ -2.67
LINC01239-201ENST00000433645 ROBO1Q9Y6N7 1651 aa-1.62□□□□□ -2.67
LINC01239-201ENST00000433645 MBD5Q9P267 1494 aa-1.63□□□□□ -2.67
LINC01239-201ENST00000433645 DIP2CQ9Y2E4 1556 aa-1.63□□□□□ -2.67
LINC01239-201ENST00000433645 FGF7P21781 194 aa-1.63□□□□□ -2.67
LINC01239-201ENST00000433645 ZNF436-AS1Q8NC38 126 aaPredicted RBP-1.63□□□□□ -2.67
LINC01239-201ENST00000433645 LINC00474Q9P2X8 69 aa-1.63□□□□□ -2.67
LINC01239-201ENST00000433645 ARL2-SNX15V9GYD0 113 aa-1.63□□□□□ -2.67
LINC01239-201ENST00000433645 UBR4Q5T4S7 5183 aa-1.63□□□□□ -2.67
LINC01239-201ENST00000433645 CCDC141Q6ZP82 1450 aa-1.63□□□□□ -2.67
LINC01239-201ENST00000433645 HTTP42858 3142 aa-1.64□□□□□ -2.67
LINC01239-201ENST00000433645 CPSF4LA6NMK7 179 aaKnown RBP-1.64□□□□□ -2.67
LINC01239-201ENST00000433645 FDCSPQ8NFU4 85 aa-1.64□□□□□ -2.67
LINC01239-201ENST00000433645 SONP18583 2426 aaKnown RBP-1.64□□□□□ -2.67
LINC01239-201ENST00000433645 NUP188Q5SRE5 1749 aa-1.64□□□□□ -2.67
LINC01239-201ENST00000433645 MRC2Q9UBG0 1479 aa-1.65□□□□□ -2.67
LINC01239-201ENST00000433645 SCN7AQ01118 1682 aa-1.65□□□□□ -2.67
LINC01239-201ENST00000433645 FAT3Q8TDW7 4589 aa-1.66□□□□□ -2.67
LINC01239-201ENST00000433645 ANKHD1Q8IWZ3 2542 aaKnown RBP-1.66□□□□□ -2.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms