RNA–Protein interactions for RNA: ENST00000432877.5

CNOT9-204, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-204ENST00000432877 FAM168BA1KXE4 195 aa10.56□□□□□ -0.72
CNOT9-204ENST00000432877 KRTAP1-4P0C5Y4 121 aa10.56□□□□□ -0.72
CNOT9-204ENST00000432877 UBE2D1P51668 147 aa10.56□□□□□ -0.72
CNOT9-204ENST00000432877 MRPS36P82909 103 aaKnown RBP10.56□□□□□ -0.72
CNOT9-204ENST00000432877 FAM104BQ5XKR9 115 aa10.56□□□□□ -0.72
CNOT9-204ENST00000432877 CARHSP1Q9Y2V2 147 aaKnown RBP10.56□□□□□ -0.72
CNOT9-204ENST00000432877 ZNF727A8MUV8 499 aa10.55□□□□□ -0.72
CNOT9-204ENST00000432877 MRPL51Q4U2R6 128 aaKnown RBP10.55□□□□□ -0.72
CNOT9-204ENST00000432877 C10orf25Q5T742 122 aa10.55□□□□□ -0.72
CNOT9-204ENST00000432877 UNQ6190/PRO20217Q6UXQ8 127 aa10.55□□□□□ -0.72
CNOT9-204ENST00000432877 KRTAP11-1Q8IUC1 163 aa10.55□□□□□ -0.72
CNOT9-204ENST00000432877 SMDT1Q9H4I9 107 aa10.55□□□□□ -0.72
CNOT9-204ENST00000432877 NAT8BQ9UHF3 227 aa10.55□□□□□ -0.72
CNOT9-204ENST00000432877 V9GYV3 84 aa10.55□□□□□ -0.72
CNOT9-204ENST00000432877 HBBP68871 147 aa10.54□□□□□ -0.72
CNOT9-204ENST00000432877 PRR4Q16378 134 aa10.54□□□□□ -0.72
CNOT9-204ENST00000432877 GAGE2EQ4V326 116 aa10.54□□□□□ -0.72
CNOT9-204ENST00000432877 FAM19A5Q7Z5A7 132 aaPredicted RBP10.54□□□□□ -0.72
CNOT9-204ENST00000432877 EIF5A2Q9GZV4 153 aaKnown RBP10.54□□□□□ -0.72
CNOT9-204ENST00000432877 C6orf48Q9UBA6 75 aa10.54□□□□□ -0.72
CNOT9-204ENST00000432877 GAGE2DQ9UEU5 116 aa10.54□□□□□ -0.72
CNOT9-204ENST00000432877 A0A1B0GW15 77 aa10.53□□□□□ -0.72
CNOT9-204ENST00000432877 UBE2BP63146 152 aa10.53□□□□□ -0.72
CNOT9-204ENST00000432877 FAM104AQ969W3 186 aa10.53□□□□□ -0.72
CNOT9-204ENST00000432877 TRBV30A0A0K0K1B3 111 aa10.52□□□□□ -0.73
CNOT9-204ENST00000432877 CKS2P33552 79 aa10.52□□□□□ -0.73
CNOT9-204ENST00000432877 RPL39P62891 51 aaKnown RBP10.52□□□□□ -0.73
CNOT9-204ENST00000432877 MUC2Q02817 5179 aa10.51□□□□□ -0.73
CNOT9-204ENST00000432877 TGIF2-C20orf24A0A0A6YYL0 155 aa10.51□□□□□ -0.73
CNOT9-204ENST00000432877 IFITM10A6NMD0 228 aa10.51□□□□□ -0.73
CNOT9-204ENST00000432877 M0QXV9 152 aa10.51□□□□□ -0.73
CNOT9-204ENST00000432877 ALKAL2Q6UX46 152 aa10.51□□□□□ -0.73
CNOT9-204ENST00000432877 TNFRSF6BO95407 300 aa10.5□□□□□ -0.73
CNOT9-204ENST00000432877 KIAA0087Q14695 138 aa10.5□□□□□ -0.73
CNOT9-204ENST00000432877 FAM74A3Q4VXF1 159 aa10.5□□□□□ -0.73
CNOT9-204ENST00000432877 KRTAP7-1Q8IUC3 87 aa10.5□□□□□ -0.73
CNOT9-204ENST00000432877 NDUFC2-KCTD14E9PQ53 114 aa10.49□□□□□ -0.73
CNOT9-204ENST00000432877 SRP19P09132 144 aaKnown RBP10.49□□□□□ -0.73
CNOT9-204ENST00000432877 SMIM2Q9BVW6 85 aa10.49□□□□□ -0.73
CNOT9-204ENST00000432877 ZNF861PO60384 105 aa10.48□□□□□ -0.73
CNOT9-204ENST00000432877 PACRGQ96M98 296 aaPredicted RBP10.48□□□□□ -0.73
CNOT9-204ENST00000432877 SMIM27A0A1W2PRY6 76 aa10.47□□□□□ -0.73
CNOT9-204ENST00000432877 PPBPP02775 128 aa10.47□□□□□ -0.73
CNOT9-204ENST00000432877 S100A8P05109 93 aa10.47□□□□□ -0.73
CNOT9-204ENST00000432877 LINC01561Q8N1V8 128 aa10.47□□□□□ -0.73
CNOT9-204ENST00000432877 PYGO1Q9Y3Y4 419 aa10.47□□□□□ -0.73
CNOT9-204ENST00000432877 F8W036 122 aa10.46□□□□□ -0.73
CNOT9-204ENST00000432877 IFI27P40305 119 aaPredicted RBP10.46□□□□□ -0.73
CNOT9-204ENST00000432877 NUPR1O60356 82 aa10.45□□□□□ -0.74
CNOT9-204ENST00000432877 C9orf129Q5T035 196 aaKnown RBP10.45□□□□□ -0.74
CNOT9-204ENST00000432877 LINC00242Q5T6M2 205 aa10.45□□□□□ -0.74
CNOT9-204ENST00000432877 D6R8Y8 96 aa10.44□□□□□ -0.74
CNOT9-204ENST00000432877 RAB5AP20339 215 aa10.44□□□□□ -0.74
CNOT9-204ENST00000432877 RPL23P62829 140 aaKnown RBP10.44□□□□□ -0.74
CNOT9-204ENST00000432877 LBHQ53QV2 105 aaPredicted RBP10.43□□□□□ -0.74
CNOT9-204ENST00000432877 C2orf82Q6UX34 121 aa10.42□□□□□ -0.74
CNOT9-204ENST00000432877 TMEM141Q96I45 108 aa10.42□□□□□ -0.74
CNOT9-204ENST00000432877 NAT8Q9UHE5 227 aa10.42□□□□□ -0.74
CNOT9-204ENST00000432877 IGLV4-3A0A075B6K6 122 aa10.41□□□□□ -0.74
CNOT9-204ENST00000432877 NPYP01303 97 aa10.41□□□□□ -0.74
CNOT9-204ENST00000432877 ADIRFQ15847 76 aa10.41□□□□□ -0.74
CNOT9-204ENST00000432877 KRTAP9-2Q9BYQ4 174 aa10.41□□□□□ -0.74
CNOT9-204ENST00000432877 TEX43Q6ZNM6 134 aa10.4□□□□□ -0.74
CNOT9-204ENST00000432877 C22orf24Q9Y442 160 aa10.4□□□□□ -0.74
CNOT9-204ENST00000432877 PRSS2P07478 247 aa10.39□□□□□ -0.75
CNOT9-204ENST00000432877 Q6ZN92 141 aa10.39□□□□□ -0.75
CNOT9-204ENST00000432877 ORMDL3Q8N138 153 aa10.39□□□□□ -0.75
CNOT9-204ENST00000432877 C2orf88Q9BSF0 95 aa10.39□□□□□ -0.75
CNOT9-204ENST00000432877 A0A1B0GXF2 115 aa10.38□□□□□ -0.75
CNOT9-204ENST00000432877 PRSS47A8MTI9 375 aa10.38□□□□□ -0.75
CNOT9-204ENST00000432877 TSPAN13O95857 204 aa10.38□□□□□ -0.75
CNOT9-204ENST00000432877 CKS1BP61024 79 aa10.38□□□□□ -0.75
CNOT9-204ENST00000432877 C6orf226Q5I0X4 101 aa10.38□□□□□ -0.75
CNOT9-204ENST00000432877 TMEM136Q6ZRR5 245 aa10.38□□□□□ -0.75
CNOT9-204ENST00000432877 AKAP14Q86UN6 197 aa10.38□□□□□ -0.75
CNOT9-204ENST00000432877 TP73-AS1Q9UF72 201 aa10.38□□□□□ -0.75
CNOT9-204ENST00000432877 CRYGAP11844 174 aa10.37□□□□□ -0.75
CNOT9-204ENST00000432877 RPL28P46779 137 aaKnown RBP10.37□□□□□ -0.75
CNOT9-204ENST00000432877 MRPL54Q6P161 138 aaKnown RBP10.37□□□□□ -0.75
CNOT9-204ENST00000432877 CTDSP1Q9GZU7 261 aa10.37□□□□□ -0.75
CNOT9-204ENST00000432877 NPSP0C0P6 89 aa10.36□□□□□ -0.75
CNOT9-204ENST00000432877 PRELID3AQ96N28 172 aa10.36□□□□□ -0.75
CNOT9-204ENST00000432877 Q8IZM0 81 aa10.35□□□□□ -0.75
CNOT9-204ENST00000432877 VCX2Q9H322 139 aa10.35□□□□□ -0.75
CNOT9-204ENST00000432877 LAMTOR2Q9Y2Q5 125 aa10.35□□□□□ -0.75
CNOT9-204ENST00000432877 BCE1O60756 84 aa10.34□□□□□ -0.75
CNOT9-204ENST00000432877 ATP5L2Q7Z4Y8 100 aa10.34□□□□□ -0.75
CNOT9-204ENST00000432877 TYMSOSQ8TAI1 123 aa10.34□□□□□ -0.75
CNOT9-204ENST00000432877 AMELXQ99217 191 aa10.34□□□□□ -0.75
CNOT9-204ENST00000432877 SEC11AP67812 179 aa10.33□□□□□ -0.76
CNOT9-204ENST00000432877 PEA15Q15121 130 aa10.33□□□□□ -0.76
CNOT9-204ENST00000432877 FAM19A3Q7Z5A8 133 aa10.33□□□□□ -0.76
CNOT9-204ENST00000432877 MRPL55Q7Z7F7 128 aaKnown RBP10.33□□□□□ -0.76
CNOT9-204ENST00000432877 LINC00469Q8N7U9 141 aa10.33□□□□□ -0.76
CNOT9-204ENST00000432877 ALKBH7Q9BT30 221 aaPredicted RBP10.33□□□□□ -0.76
CNOT9-204ENST00000432877 TOMM7Q9P0U1 55 aa10.33□□□□□ -0.76
CNOT9-204ENST00000432877 CYSLTR1Q9Y271 337 aa10.33□□□□□ -0.76
CNOT9-204ENST00000432877 A0A087X002 238 aa10.32□□□□□ -0.76
CNOT9-204ENST00000432877 LCE2AQ5TA79 106 aaPredicted RBP10.32□□□□□ -0.76
CNOT9-204ENST00000432877 C2orf66Q6UXQ4 117 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms