RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 IGLC1P0CG04 106 aa-0.31□□□□□ -2.46
CDC40-204ENST00000431461 C9orf153Q5TBE3 101 aa-0.31□□□□□ -2.46
CDC40-204ENST00000431461 FAM107BQ9H098 131 aa-0.31□□□□□ -2.46
CDC40-204ENST00000431461 MYCBP2O75592 4640 aa-0.31□□□□□ -2.46
CDC40-204ENST00000431461 HSPG2P98160 4391 aa-0.32□□□□□ -2.46
CDC40-204ENST00000431461 MAPKBP1O60336 1514 aa-0.32□□□□□ -2.46
CDC40-204ENST00000431461 LPAP08519 4548 aa-0.32□□□□□ -2.46
CDC40-204ENST00000431461 SYS1-DBNDD2H3BUS1 97 aa-0.32□□□□□ -2.46
CDC40-204ENST00000431461 KRTDAPP60985 99 aa-0.32□□□□□ -2.46
CDC40-204ENST00000431461 GNG11P61952 73 aa-0.32□□□□□ -2.46
CDC40-204ENST00000431461 C10orf113Q5VZT2 155 aa-0.32□□□□□ -2.46
CDC40-204ENST00000431461 RPL13AP3Q6NVV1 102 aa-0.32□□□□□ -2.46
CDC40-204ENST00000431461 SVBPQ8N300 66 aa-0.32□□□□□ -2.46
CDC40-204ENST00000431461 TSLPQ969D9 159 aa-0.32□□□□□ -2.46
CDC40-204ENST00000431461 PSME4Q14997 1843 aa-0.32□□□□□ -2.46
CDC40-204ENST00000431461 FOCADQ5VW36 1801 aa-0.32□□□□□ -2.46
CDC40-204ENST00000431461 NSD3Q9BZ95 1437 aa-0.32□□□□□ -2.46
CDC40-204ENST00000431461 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.32□□□□□ -2.46
CDC40-204ENST00000431461 CSPG4Q6UVK1 2322 aa-0.32□□□□□ -2.46
CDC40-204ENST00000431461 DIP2CQ9Y2E4 1556 aa-0.32□□□□□ -2.46
CDC40-204ENST00000431461 MRC2Q9UBG0 1479 aa-0.33□□□□□ -2.46
CDC40-204ENST00000431461 A0A1B0GWA3 101 aa-0.33□□□□□ -2.46
CDC40-204ENST00000431461 TRAPPC2P0DI81 140 aa-0.33□□□□□ -2.46
CDC40-204ENST00000431461 TRAPPC2BP0DI82 140 aa-0.33□□□□□ -2.46
CDC40-204ENST00000431461 SAA2P0DJI9 122 aaPredicted RBP-0.33□□□□□ -2.46
CDC40-204ENST00000431461 GNG4P50150 75 aa-0.33□□□□□ -2.46
CDC40-204ENST00000431461 DPH3P1Q9H4G8 78 aa-0.33□□□□□ -2.46
CDC40-204ENST00000431461 LINC00846Q9NV44 126 aa-0.33□□□□□ -2.46
CDC40-204ENST00000431461 PRO1854Q9UHT4 67 aa-0.33□□□□□ -2.46
CDC40-204ENST00000431461 ARL2-SNX15V9GYD0 113 aa-0.33□□□□□ -2.46
CDC40-204ENST00000431461 A0A0G2JMZ2 1700 aa-0.33□□□□□ -2.46
CDC40-204ENST00000431461 PHLPP1O60346 1717 aa-0.33□□□□□ -2.46
CDC40-204ENST00000431461 EHBP1L1Q8N3D4 1523 aa-0.33□□□□□ -2.46
CDC40-204ENST00000431461 CHD6Q8TD26 2715 aa-0.34□□□□□ -2.46
CDC40-204ENST00000431461 MYOM2P54296 1465 aa-0.34□□□□□ -2.46
CDC40-204ENST00000431461 OOSP1A8MZH6 123 aa-0.34□□□□□ -2.46
CDC40-204ENST00000431461 MRPS10P82664 201 aaKnown RBP-0.34□□□□□ -2.46
CDC40-204ENST00000431461 FAM223AQ8IWN6 122 aa-0.34□□□□□ -2.46
CDC40-204ENST00000431461 C12orf57Q99622 126 aa-0.34□□□□□ -2.46
CDC40-204ENST00000431461 QRICH2Q9H0J4 1663 aa-0.34□□□□□ -2.46
CDC40-204ENST00000431461 HMGXB3Q12766 1538 aa-0.34□□□□□ -2.46
CDC40-204ENST00000431461 KMT2AQ03164 3969 aa-0.34□□□□□ -2.46
CDC40-204ENST00000431461 LRP2P98164 4655 aa-0.34□□□□□ -2.46
CDC40-204ENST00000431461 SHROOM2Q13796 1616 aa-0.35□□□□□ -2.46
CDC40-204ENST00000431461 NALCNQ8IZF0 1738 aa-0.35□□□□□ -2.47
CDC40-204ENST00000431461 EIF4G3O43432 1585 aaKnown RBP-0.35□□□□□ -2.47
CDC40-204ENST00000431461 M0R2T5 61 aa-0.35□□□□□ -2.47
CDC40-204ENST00000431461 SNAPC5O75971 98 aa-0.35□□□□□ -2.47
CDC40-204ENST00000431461 UBE2D3P61077 147 aa-0.35□□□□□ -2.47
CDC40-204ENST00000431461 UBE2D2P62837 147 aa-0.35□□□□□ -2.47
CDC40-204ENST00000431461 FDCSPQ8NFU4 85 aa-0.35□□□□□ -2.47
CDC40-204ENST00000431461 DEFB105AQ8NG35 78 aa-0.35□□□□□ -2.47
CDC40-204ENST00000431461 FXYD6Q9H0Q3 95 aa-0.35□□□□□ -2.47
CDC40-204ENST00000431461 KDM5AP29375 1690 aaKnown RBP-0.35□□□□□ -2.47
CDC40-204ENST00000431461 EP300Q09472 2414 aaPredicted RBP-0.35□□□□□ -2.47
CDC40-204ENST00000431461 ROCK2O75116 1388 aaKnown RBP-0.35□□□□□ -2.47
CDC40-204ENST00000431461 WNK1Q9H4A3 2382 aa-0.35□□□□□ -2.47
CDC40-204ENST00000431461 IQSEC2Q5JU85 1478 aa-0.35□□□□□ -2.47
CDC40-204ENST00000431461 APC2O95996 2303 aa-0.36□□□□□ -2.47
CDC40-204ENST00000431461 SCAPERQ9BY12 1400 aa-0.36□□□□□ -2.47
CDC40-204ENST00000431461 LINC00959A0A1B0GUT2 108 aa-0.36□□□□□ -2.47
CDC40-204ENST00000431461 PPP3R1P63098 170 aa-0.36□□□□□ -2.47
CDC40-204ENST00000431461 TMEM203Q969S6 136 aa-0.36□□□□□ -2.47
CDC40-204ENST00000431461 LINC01600Q96MT4 127 aa-0.36□□□□□ -2.47
CDC40-204ENST00000431461 MANBALQ9NQG1 85 aa-0.36□□□□□ -2.47
CDC40-204ENST00000431461 LINC00474Q9P2X8 69 aa-0.36□□□□□ -2.47
CDC40-204ENST00000431461 DCHS2Q6V1P9 2916 aa-0.36□□□□□ -2.47
CDC40-204ENST00000431461 SPTA1P02549 2419 aa-0.36□□□□□ -2.47
CDC40-204ENST00000431461 TET3O43151 1660 aa-0.37□□□□□ -2.47
CDC40-204ENST00000431461 KIAA0556O60303 1618 aa-0.37□□□□□ -2.47
CDC40-204ENST00000431461 LOC100130705A0A1B0GUX0 176 aa-0.37□□□□□ -2.47
CDC40-204ENST00000431461 Q0VG73 95 aa-0.37□□□□□ -2.47
CDC40-204ENST00000431461 CGREF1Q99674 301 aa-0.37□□□□□ -2.47
CDC40-204ENST00000431461 VAMP8Q9BV40 100 aa-0.37□□□□□ -2.47
CDC40-204ENST00000431461 PIEZO2Q9H5I5 2752 aa-0.37□□□□□ -2.47
CDC40-204ENST00000431461 BTAF1O14981 1849 aa-0.38□□□□□ -2.47
CDC40-204ENST00000431461 CORTO00230 105 aa-0.38□□□□□ -2.47
CDC40-204ENST00000431461 SEC11AP67812 179 aa-0.38□□□□□ -2.47
CDC40-204ENST00000431461 SARNPP82979 210 aaKnown RBP-0.38□□□□□ -2.47
CDC40-204ENST00000431461 C1orf167Q5SNV9 1468 aa-0.38□□□□□ -2.47
CDC40-204ENST00000431461 ARHGEF5Q12774 1597 aa-0.38□□□□□ -2.47
CDC40-204ENST00000431461 NRKQ7Z2Y5 1582 aa-0.38□□□□□ -2.47
CDC40-204ENST00000431461 SRRM2Q9UQ35 2752 aaKnown RBP-0.38□□□□□ -2.47
CDC40-204ENST00000431461 XRN1Q8IZH2 1706 aaKnown RBP-0.38□□□□□ -2.47
CDC40-204ENST00000431461 MAP1BP46821 2468 aaKnown RBP-0.39□□□□□ -2.47
CDC40-204ENST00000431461 CUL7Q14999 1698 aa-0.39□□□□□ -2.47
CDC40-204ENST00000431461 ROBO1Q9Y6N7 1651 aa-0.39□□□□□ -2.47
CDC40-204ENST00000431461 FLNBO75369 2602 aaKnown RBP-0.39□□□□□ -2.47
CDC40-204ENST00000431461 ADGRL2O95490 1459 aa-0.39□□□□□ -2.47
CDC40-204ENST00000431461 DLEU1O43261 78 aa-0.39□□□□□ -2.47
CDC40-204ENST00000431461 NDUFC1O43677 76 aa-0.39□□□□□ -2.47
CDC40-204ENST00000431461 CRIPTQ9P021 101 aa-0.39□□□□□ -2.47
CDC40-204ENST00000431461 ARHGAP5Q13017 1502 aa-0.39□□□□□ -2.47
CDC40-204ENST00000431461 MUC12Q9UKN1 5478 aa-0.39□□□□□ -2.47
CDC40-204ENST00000431461 ACANP16112 2415 aa-0.39□□□□□ -2.47
CDC40-204ENST00000431461 GVINP1Q7Z2Y8 2422 aa-0.39□□□□□ -2.47
CDC40-204ENST00000431461 CHD8Q9HCK8 2581 aa-0.4□□□□□ -2.47
CDC40-204ENST00000431461 CRYM-AS1A6NIL9 109 aa-0.4□□□□□ -2.47
CDC40-204ENST00000431461 H3BQF6 201 aa-0.4□□□□□ -2.47
CDC40-204ENST00000431461 KRTAP19-7Q3SYF9 63 aa-0.4□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms