RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 COX6A2Q02221 97 aa11.65□□□□□ -0.54
USHBP1-203ENST00000431146 ATP6V0E2Q8NHE4 81 aa11.65□□□□□ -0.54
USHBP1-203ENST00000431146 HIST1H4GQ99525 98 aa11.65□□□□□ -0.54
USHBP1-203ENST00000431146 CDC42SE2Q9NRR3 84 aa11.65□□□□□ -0.54
USHBP1-203ENST00000431146 TENM3Q9P273 2699 aa11.65□□□□□ -0.54
USHBP1-203ENST00000431146 LEPROTO15243 131 aa11.65□□□□□ -0.55
USHBP1-203ENST00000431146 LGALS3P17931 250 aaKnown RBP11.65□□□□□ -0.55
USHBP1-203ENST00000431146 CHCHD5Q9BSY4 110 aa11.65□□□□□ -0.55
USHBP1-203ENST00000431146 CSDC2Q9Y534 153 aaKnown RBP11.65□□□□□ -0.55
USHBP1-203ENST00000431146 A8MZ25 164 aa11.64□□□□□ -0.55
USHBP1-203ENST00000431146 SPART-AS1P0CW21 52 aa11.64□□□□□ -0.55
USHBP1-203ENST00000431146 CEND1Q8N111 149 aa11.64□□□□□ -0.55
USHBP1-203ENST00000431146 VSIG2Q96IQ7 327 aa11.64□□□□□ -0.55
USHBP1-203ENST00000431146 CDKN2A-AS1Q9UH64 79 aa11.64□□□□□ -0.55
USHBP1-203ENST00000431146 PRB2P02812 416 aaPredicted RBP11.63□□□□□ -0.55
USHBP1-203ENST00000431146 F5H768 121 aa11.63□□□□□ -0.55
USHBP1-203ENST00000431146 IGHV3-30-3P0DP02 117 aa11.63□□□□□ -0.55
USHBP1-203ENST00000431146 TMEM101Q96IK0 257 aa11.63□□□□□ -0.55
USHBP1-203ENST00000431146 IGLV4-60A0A075B6I1 120 aa11.62□□□□□ -0.55
USHBP1-203ENST00000431146 ATP5G1P05496 136 aa11.62□□□□□ -0.55
USHBP1-203ENST00000431146 LINC00242Q5T6M2 205 aa11.62□□□□□ -0.55
USHBP1-203ENST00000431146 IGKV3OR2-268A0A0C4DH90 116 aa11.62□□□□□ -0.55
USHBP1-203ENST00000431146 RAB37Q96AX2 223 aa11.62□□□□□ -0.55
USHBP1-203ENST00000431146 K7ERJ3 54 aa11.6□□□□□ -0.55
USHBP1-203ENST00000431146 NAA38Q9BRA0 125 aaKnown RBP11.6□□□□□ -0.55
USHBP1-203ENST00000431146 TM2D2Q9BX73 214 aa11.6□□□□□ -0.55
USHBP1-203ENST00000431146 SAMD5Q5TGI4 173 aa11.6□□□□□ -0.55
USHBP1-203ENST00000431146 NHP2Q9NX24 153 aaKnown RBP11.6□□□□□ -0.55
USHBP1-203ENST00000431146 IGHV1-58A0A0C4DH39 117 aa11.59□□□□□ -0.55
USHBP1-203ENST00000431146 H7C423 109 aa11.59□□□□□ -0.55
USHBP1-203ENST00000431146 M0QXV9 152 aa11.59□□□□□ -0.55
USHBP1-203ENST00000431146 TIRAPP58753 221 aa11.59□□□□□ -0.55
USHBP1-203ENST00000431146 SRSF9Q13242 221 aaKnown RBP eCLIP11.59□□□□□ -0.55
USHBP1-203ENST00000431146 TAL2Q16559 108 aa11.59□□□□□ -0.55
USHBP1-203ENST00000431146 CDIP1Q9H305 208 aa11.59□□□□□ -0.55
USHBP1-203ENST00000431146 HERVK_113P63121 156 aa11.58□□□□□ -0.56
USHBP1-203ENST00000431146 IGLV5-45A0A087WSX0 123 aa11.57□□□□□ -0.56
USHBP1-203ENST00000431146 TMEM262E9PQX1 116 aa11.57□□□□□ -0.56
USHBP1-203ENST00000431146 C10orf126Q8N4M7 172 aa11.57□□□□□ -0.56
USHBP1-203ENST00000431146 MGAM2Q2M2H8 2515 aa11.56□□□□□ -0.56
USHBP1-203ENST00000431146 C12orf74Q32Q52 190 aa11.56□□□□□ -0.56
USHBP1-203ENST00000431146 SMIM13P0DJ93 91 aa11.55□□□□□ -0.56
USHBP1-203ENST00000431146 FAM19A3Q7Z5A8 133 aa11.55□□□□□ -0.56
USHBP1-203ENST00000431146 ZFAND6Q6FIF0 208 aa11.54□□□□□ -0.56
USHBP1-203ENST00000431146 NDUFA12Q9UI09 145 aa11.54□□□□□ -0.56
USHBP1-203ENST00000431146 MT-ATP8P03928 68 aa11.54□□□□□ -0.56
USHBP1-203ENST00000431146 NHLRC4P0CG21 123 aaPredicted RBP11.54□□□□□ -0.56
USHBP1-203ENST00000431146 WFDC2Q14508 124 aa11.54□□□□□ -0.56
USHBP1-203ENST00000431146 Q8N3U1 123 aa11.54□□□□□ -0.56
USHBP1-203ENST00000431146 A0A0J9YXY3 114 aa11.53□□□□□ -0.56
USHBP1-203ENST00000431146 CLPSL2Q6UWE3 100 aa11.53□□□□□ -0.56
USHBP1-203ENST00000431146 MDFIQ99750 246 aa11.53□□□□□ -0.56
USHBP1-203ENST00000431146 SMIM1B2RUZ4 78 aa11.53□□□□□ -0.56
USHBP1-203ENST00000431146 A0A0J9YWU9 116 aa11.52□□□□□ -0.57
USHBP1-203ENST00000431146 TMEM126AQ9H061 195 aa11.52□□□□□ -0.57
USHBP1-203ENST00000431146 IGHV3-30P01768 117 aa11.51□□□□□ -0.57
USHBP1-203ENST00000431146 IGHV3-30-5P0DP03 117 aa11.51□□□□□ -0.57
USHBP1-203ENST00000431146 ETDBQ3ZM63 59 aa11.51□□□□□ -0.57
USHBP1-203ENST00000431146 Q6ZTC4 211 aa11.51□□□□□ -0.57
USHBP1-203ENST00000431146 XGP55808 180 aa11.51□□□□□ -0.57
USHBP1-203ENST00000431146 MRPL23Q16540 153 aaKnown RBP11.51□□□□□ -0.57
USHBP1-203ENST00000431146 PPDPFQ9H3Y8 114 aa11.51□□□□□ -0.57
USHBP1-203ENST00000431146 IGLV5-39A0A0G2JS06 123 aa11.5□□□□□ -0.57
USHBP1-203ENST00000431146 ICOSQ9Y6W8 199 aa11.5□□□□□ -0.57
USHBP1-203ENST00000431146 FOXI1Q12951 378 aa11.5□□□□□ -0.57
USHBP1-203ENST00000431146 MRAPQ8TCY5 172 aa11.49□□□□□ -0.57
USHBP1-203ENST00000431146 LINC00959A0A1B0GUT2 108 aa11.48□□□□□ -0.57
USHBP1-203ENST00000431146 A0A1B0GUV1 79 aa11.48□□□□□ -0.57
USHBP1-203ENST00000431146 SH2D6Q7Z4S9 175 aa11.48□□□□□ -0.57
USHBP1-203ENST00000431146 ZNF625Q96I27 306 aaPredicted RBP11.48□□□□□ -0.57
USHBP1-203ENST00000431146 LITAFQ99732 161 aa11.48□□□□□ -0.57
USHBP1-203ENST00000431146 PRO0461Q9UI25 63 aa11.48□□□□□ -0.57
USHBP1-203ENST00000431146 K7EIL1 84 aa11.48□□□□□ -0.57
USHBP1-203ENST00000431146 NANOS2P60321 138 aaKnown RBP11.48□□□□□ -0.57
USHBP1-203ENST00000431146 DEFB121Q5J5C9 76 aa11.48□□□□□ -0.57
USHBP1-203ENST00000431146 ADAMTSL4-AS1Q5T5F5 129 aa11.48□□□□□ -0.57
USHBP1-203ENST00000431146 C11orf68Q9H3H3 251 aaKnown RBP11.48□□□□□ -0.57
USHBP1-203ENST00000431146 Q9H8V8 135 aa11.47□□□□□ -0.57
USHBP1-203ENST00000431146 APOMO95445 188 aa11.47□□□□□ -0.57
USHBP1-203ENST00000431146 NPC2P61916 151 aa11.46□□□□□ -0.57
USHBP1-203ENST00000431146 C5orf38Q86SI9 138 aa11.46□□□□□ -0.57
USHBP1-203ENST00000431146 MUSTN1Q8IVN3 82 aa11.46□□□□□ -0.57
USHBP1-203ENST00000431146 LINC00269Q8N2A0 174 aa11.46□□□□□ -0.57
USHBP1-203ENST00000431146 IGHV3OR16-9A0A0B4J2B5 98 aa11.45□□□□□ -0.58
USHBP1-203ENST00000431146 A0A1B0GWB2 263 aa11.45□□□□□ -0.58
USHBP1-203ENST00000431146 NDUFA1O15239 70 aa11.45□□□□□ -0.58
USHBP1-203ENST00000431146 XCL1P47992 114 aa11.45□□□□□ -0.58
USHBP1-203ENST00000431146 DAND5Q8N907 189 aa11.45□□□□□ -0.58
USHBP1-203ENST00000431146 HUWE1Q7Z6Z7 4374 aaKnown RBP11.45□□□□□ -0.58
USHBP1-203ENST00000431146 ANGP03950 147 aaKnown RBP11.45□□□□□ -0.58
USHBP1-203ENST00000431146 NDUFV3P56181 108 aaKnown RBP11.45□□□□□ -0.58
USHBP1-203ENST00000431146 IGLL5B9A064 214 aa11.44□□□□□ -0.58
USHBP1-203ENST00000431146 CCDC179H3BU77 68 aa11.44□□□□□ -0.58
USHBP1-203ENST00000431146 PRSS2P07478 247 aa11.44□□□□□ -0.58
USHBP1-203ENST00000431146 KPRPQ5T749 579 aaPredicted RBP11.44□□□□□ -0.58
USHBP1-203ENST00000431146 Q6Q795 121 aa11.44□□□□□ -0.58
USHBP1-203ENST00000431146 TOMM7Q9P0U1 55 aa11.44□□□□□ -0.58
USHBP1-203ENST00000431146 A0A0U1RRA0 63 aa11.44□□□□□ -0.58
USHBP1-203ENST00000431146 H3BMG7 143 aa11.44□□□□□ -0.58
USHBP1-203ENST00000431146 LELP1Q5T871 98 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms