RNA–Protein interactions for RNA: ENST00000430627.6

CDK12-201, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK12, Length 5,918 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-201ENST00000430627 TRBV30A0A0K0K1B3 111 aa9.6□□□□□ -0.87
CDK12-201ENST00000430627 E9PLD3 99 aa9.6□□□□□ -0.87
CDK12-201ENST00000430627 DEFB116Q30KQ4 102 aa9.6□□□□□ -0.87
CDK12-201ENST00000430627 CUL9Q8IWT3 2517 aa9.6□□□□□ -0.87
CDK12-201ENST00000430627 NUPR1O60356 82 aa9.59□□□□□ -0.87
CDK12-201ENST00000430627 EBI3Q14213 229 aa9.59□□□□□ -0.87
CDK12-201ENST00000430627 C10orf91Q5T1B1 145 aa9.59□□□□□ -0.87
CDK12-201ENST00000430627 CELA1Q9UNI1 258 aa9.59□□□□□ -0.87
CDK12-201ENST00000430627 BDP1A6H8Y1 2624 aa9.59□□□□□ -0.87
CDK12-201ENST00000430627 M0QY20 66 aa9.59□□□□□ -0.87
CDK12-201ENST00000430627 NDUFC2O95298 119 aa9.58□□□□□ -0.88
CDK12-201ENST00000430627 C7orf65Q6ZTY9 151 aa9.58□□□□□ -0.88
CDK12-201ENST00000430627 ATOX1O00244 68 aa9.58□□□□□ -0.88
CDK12-201ENST00000430627 TEN1Q86WV5 123 aa9.58□□□□□ -0.88
CDK12-201ENST00000430627 NOTCH4Q99466 2003 aa9.58□□□□□ -0.88
CDK12-201ENST00000430627 TTC28Q96AY4 2481 aa9.57□□□□□ -0.88
CDK12-201ENST00000430627 LINC00315P59091 139 aa9.57□□□□□ -0.88
CDK12-201ENST00000430627 ANAPC1Q9H1A4 1944 aa9.57□□□□□ -0.88
CDK12-201ENST00000430627 MOBPQ13875 183 aa9.57□□□□□ -0.88
CDK12-201ENST00000430627 EGFEM1PQ0D2K5 195 aa9.57□□□□□ -0.88
CDK12-201ENST00000430627 ARHGAP21Q5T5U3 1957 aa9.56□□□□□ -0.88
CDK12-201ENST00000430627 hDV103S1A0JD37 113 aa9.56□□□□□ -0.88
CDK12-201ENST00000430627 BRK1Q8WUW1 75 aa9.56□□□□□ -0.88
CDK12-201ENST00000430627 NBDYA0A0U1RRE5 68 aa9.56□□□□□ -0.88
CDK12-201ENST00000430627 M0R2T5 61 aa9.56□□□□□ -0.88
CDK12-201ENST00000430627 PCOTHQ58A44 107 aa9.56□□□□□ -0.88
CDK12-201ENST00000430627 HIVEP3Q5T1R4 2406 aa9.56□□□□□ -0.88
CDK12-201ENST00000430627 EP400Q96L91 3159 aa9.56□□□□□ -0.88
CDK12-201ENST00000430627 DENND4CQ5VZ89 1909 aa9.56□□□□□ -0.88
CDK12-201ENST00000430627 CRYGAP11844 174 aa9.55□□□□□ -0.88
CDK12-201ENST00000430627 COL5A1P20908 1838 aaPredicted RBP9.55□□□□□ -0.88
CDK12-201ENST00000430627 SDIM1Q6ZPB5 146 aa9.55□□□□□ -0.88
CDK12-201ENST00000430627 FSTL3O95633 263 aa9.55□□□□□ -0.88
CDK12-201ENST00000430627 SPATA3Q8NHX4 192 aa9.55□□□□□ -0.88
CDK12-201ENST00000430627 LINC00308Q8TCZ7 52 aa9.55□□□□□ -0.88
CDK12-201ENST00000430627 SONP18583 2426 aaKnown RBP9.55□□□□□ -0.88
CDK12-201ENST00000430627 TRBV7-6A0A0J9YX20 115 aa9.54□□□□□ -0.88
CDK12-201ENST00000430627 UTRNP46939 3433 aa9.54□□□□□ -0.88
CDK12-201ENST00000430627 CHCHD7Q9BUK0 85 aa9.54□□□□□ -0.88
CDK12-201ENST00000430627 Q6ZRP5 223 aa9.53□□□□□ -0.88
CDK12-201ENST00000430627 MED13LQ71F56 2210 aa9.53□□□□□ -0.88
CDK12-201ENST00000430627 FHL2Q14192 279 aa9.53□□□□□ -0.88
CDK12-201ENST00000430627 COX17Q14061 63 aa9.52□□□□□ -0.88
CDK12-201ENST00000430627 K7EP13 123 aa9.52□□□□□ -0.89
CDK12-201ENST00000430627 NCOA6Q14686 2063 aaPredicted RBP9.52□□□□□ -0.89
CDK12-201ENST00000430627 NDUFV3P56181 108 aaKnown RBP9.52□□□□□ -0.89
CDK12-201ENST00000430627 TRBV10-3A0A0K0K1G6 114 aa9.51□□□□□ -0.89
CDK12-201ENST00000430627 ZNF22P17026 224 aaPredicted RBP9.51□□□□□ -0.89
CDK12-201ENST00000430627 BRWD1-AS2P59051 145 aa9.5□□□□□ -0.89
CDK12-201ENST00000430627 Q6JHZ5 121 aa9.5□□□□□ -0.89
CDK12-201ENST00000430627 Q8IZM0 81 aa9.5□□□□□ -0.89
CDK12-201ENST00000430627 LTBP2Q14767 1821 aa9.5□□□□□ -0.89
CDK12-201ENST00000430627 A6NED7 52 aa9.49□□□□□ -0.89
CDK12-201ENST00000430627 SMCR5Q8TEV8 140 aa9.49□□□□□ -0.89
CDK12-201ENST00000430627 ZNF106Q9H2Y7 1883 aaKnown RBP9.49□□□□□ -0.89
CDK12-201ENST00000430627 A0A1W2PPR1 153 aa9.49□□□□□ -0.89
CDK12-201ENST00000430627 Q8N6K4 173 aa9.49□□□□□ -0.89
CDK12-201ENST00000430627 TP73-AS1Q9UF72 201 aa9.49□□□□□ -0.89
CDK12-201ENST00000430627 PLXNB3Q9ULL4 1909 aa9.49□□□□□ -0.89
CDK12-201ENST00000430627 A0A087WSZ3 146 aa9.48□□□□□ -0.89
CDK12-201ENST00000430627 TSHBP01222 138 aa9.48□□□□□ -0.89
CDK12-201ENST00000430627 Q6ZSN1 163 aa9.48□□□□□ -0.89
CDK12-201ENST00000430627 EPM2AB3EWF7 344 aa9.48□□□□□ -0.89
CDK12-201ENST00000430627 PRR9Q5T870 116 aa9.48□□□□□ -0.89
CDK12-201ENST00000430627 Q96NJ1 140 aa9.48□□□□□ -0.89
CDK12-201ENST00000430627 FREM1Q5H8C1 2179 aa9.48□□□□□ -0.89
CDK12-201ENST00000430627 LINC00242Q5T6M2 205 aa9.48□□□□□ -0.89
CDK12-201ENST00000430627 FXYD2P54710 66 aa9.47□□□□□ -0.89
CDK12-201ENST00000430627 IGLV4-60A0A075B6I1 120 aa9.47□□□□□ -0.89
CDK12-201ENST00000430627 C22orf24Q9Y442 160 aa9.47□□□□□ -0.89
CDK12-201ENST00000430627 NDUFC2-KCTD14E9PQ53 114 aa9.47□□□□□ -0.89
CDK12-201ENST00000430627 P0C879 139 aa9.47□□□□□ -0.89
CDK12-201ENST00000430627 Q6ZRU5 148 aa9.47□□□□□ -0.89
CDK12-201ENST00000430627 PHF5AQ7RTV0 110 aaKnown RBP9.47□□□□□ -0.89
CDK12-201ENST00000430627 PRR3P79522 188 aaKnown RBP9.46□□□□□ -0.89
CDK12-201ENST00000430627 RNASE3P12724 160 aaKnown RBP9.46□□□□□ -0.89
CDK12-201ENST00000430627 C20orf197Q8N268 126 aa9.46□□□□□ -0.9
CDK12-201ENST00000430627 SMIM11BQ8TCY0 68 aa9.45□□□□□ -0.9
CDK12-201ENST00000430627 LINC01547P58512 204 aaPredicted RBP9.45□□□□□ -0.9
CDK12-201ENST00000430627 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.45□□□□□ -0.9
CDK12-201ENST00000430627 SNURFQ9Y675 71 aa9.45□□□□□ -0.9
CDK12-201ENST00000430627 SHANK1Q9Y566 2161 aa9.45□□□□□ -0.9
CDK12-201ENST00000430627 CDC42SE2Q9NRR3 84 aa9.45□□□□□ -0.9
CDK12-201ENST00000430627 HCG22E2RYF7 251 aa9.44□□□□□ -0.9
CDK12-201ENST00000430627 C9orf92A6NGG3 77 aa9.44□□□□□ -0.9
CDK12-201ENST00000430627 ATRXP46100 2492 aa9.43□□□□□ -0.9
CDK12-201ENST00000430627 LINC00208Q96KT6 92 aa9.43□□□□□ -0.9
CDK12-201ENST00000430627 MRPS36P82909 103 aaKnown RBP9.43□□□□□ -0.9
CDK12-201ENST00000430627 LINC00574Q9H8X3 128 aa9.43□□□□□ -0.9
CDK12-201ENST00000430627 H3BT86 120 aa9.43□□□□□ -0.9
CDK12-201ENST00000430627 Q9UF83 564 aa9.43□□□□□ -0.9
CDK12-201ENST00000430627 Q8N2B8 174 aa9.43□□□□□ -0.9
CDK12-201ENST00000430627 RNASE8Q8TDE3 154 aaKnown RBP9.43□□□□□ -0.9
CDK12-201ENST00000430627 WNK1Q9H4A3 2382 aa9.42□□□□□ -0.9
CDK12-201ENST00000430627 LINC00575Q6W349 94 aa9.42□□□□□ -0.9
CDK12-201ENST00000430627 RNF185Q96GF1 192 aa9.42□□□□□ -0.9
CDK12-201ENST00000430627 CCDC168Q8NDH2 2452 aa9.42□□□□□ -0.9
CDK12-201ENST00000430627 ACYP2P14621 99 aa9.42□□□□□ -0.9
CDK12-201ENST00000430627 CRIP2P52943 208 aaPredicted RBP9.41□□□□□ -0.9
CDK12-201ENST00000430627 SORL1Q92673 2214 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms