RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 ERASQ7Z444 233 aa11.02□□□□□ -0.65
UBE3D-204ENST00000430071 BAGE3Q86Y29 109 aa11.02□□□□□ -0.65
UBE3D-204ENST00000430071 TMEM141Q96I45 108 aa11.02□□□□□ -0.65
UBE3D-204ENST00000430071 SCGB3A1Q96QR1 104 aa11.02□□□□□ -0.65
UBE3D-204ENST00000430071 TIMM17AQ99595 171 aa11.02□□□□□ -0.65
UBE3D-204ENST00000430071 IFITM10A6NMD0 228 aa11.01□□□□□ -0.65
UBE3D-204ENST00000430071 CHCHD1Q96BP2 118 aaKnown RBP11.01□□□□□ -0.65
UBE3D-204ENST00000430071 NPSP0C0P6 89 aa11□□□□□ -0.65
UBE3D-204ENST00000430071 FOXI1Q12951 378 aa11□□□□□ -0.65
UBE3D-204ENST00000430071 AMELXQ99217 191 aa11□□□□□ -0.65
UBE3D-204ENST00000430071 LINC01549A6NIU2 74 aa10.99□□□□□ -0.65
UBE3D-204ENST00000430071 C1orf196B1AJZ1 125 aa10.99□□□□□ -0.65
UBE3D-204ENST00000430071 USP17L23D6RBM5 183 aa10.99□□□□□ -0.65
UBE3D-204ENST00000430071 FAM229AH3BQW9 127 aa10.99□□□□□ -0.65
UBE3D-204ENST00000430071 HIST1H2BKO60814 126 aa10.99□□□□□ -0.65
UBE3D-204ENST00000430071 HBDP02042 147 aa10.99□□□□□ -0.65
UBE3D-204ENST00000430071 HIST1H2BJP06899 126 aa10.99□□□□□ -0.65
UBE3D-204ENST00000430071 HIST1H2BOP23527 126 aa10.99□□□□□ -0.65
UBE3D-204ENST00000430071 HIST1H2BBP33778 126 aa10.99□□□□□ -0.65
UBE3D-204ENST00000430071 HIST1H2BDP58876 126 aa10.99□□□□□ -0.65
UBE3D-204ENST00000430071 HIST1H2BCP62807 126 aa10.99□□□□□ -0.65
UBE3D-204ENST00000430071 HIST2H2BEQ16778 126 aa10.99□□□□□ -0.65
UBE3D-204ENST00000430071 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.99□□□□□ -0.65
UBE3D-204ENST00000430071 HIST1H2BHQ93079 126 aa10.99□□□□□ -0.65
UBE3D-204ENST00000430071 HIST1H2BNQ99877 126 aa10.99□□□□□ -0.65
UBE3D-204ENST00000430071 HIST1H2BMQ99879 126 aa10.99□□□□□ -0.65
UBE3D-204ENST00000430071 SERF1AO75920 110 aa10.98□□□□□ -0.65
UBE3D-204ENST00000430071 PDZD11Q5EBL8 140 aa10.98□□□□□ -0.65
UBE3D-204ENST00000430071 Q6ZN92 141 aa10.98□□□□□ -0.65
UBE3D-204ENST00000430071 TEX43Q6ZNM6 134 aa10.98□□□□□ -0.65
UBE3D-204ENST00000430071 SCXQ7RTU7 201 aa10.98□□□□□ -0.65
UBE3D-204ENST00000430071 VCX2Q9H322 139 aa10.98□□□□□ -0.65
UBE3D-204ENST00000430071 NUPR1O60356 82 aa10.97□□□□□ -0.65
UBE3D-204ENST00000430071 PRSS1P07477 247 aa10.97□□□□□ -0.65
UBE3D-204ENST00000430071 CD164L2Q6UWJ8 174 aa10.97□□□□□ -0.65
UBE3D-204ENST00000430071 UBE2D1P51668 147 aa10.96□□□□□ -0.65
UBE3D-204ENST00000430071 PAPPA-AS1Q5QFB9 102 aa10.96□□□□□ -0.65
UBE3D-204ENST00000430071 FAM19A2Q8N3H0 131 aa10.96□□□□□ -0.65
UBE3D-204ENST00000430071 HSBP1O75506 76 aa10.95□□□□□ -0.66
UBE3D-204ENST00000430071 LINC00242Q5T6M2 205 aa10.95□□□□□ -0.66
UBE3D-204ENST00000430071 LINC00528Q8N1L1 170 aa10.95□□□□□ -0.66
UBE3D-204ENST00000430071 C2orf88Q9BSF0 95 aa10.95□□□□□ -0.66
UBE3D-204ENST00000430071 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.94□□□□□ -0.66
UBE3D-204ENST00000430071 C15orf56Q8N910 161 aa10.94□□□□□ -0.66
UBE3D-204ENST00000430071 COX6A2Q02221 97 aa10.93□□□□□ -0.66
UBE3D-204ENST00000430071 CIRBP-AS1Q8TBR5 109 aa10.93□□□□□ -0.66
UBE3D-204ENST00000430071 IGHV3OR16-9A0A0B4J2B5 98 aa10.92□□□□□ -0.66
UBE3D-204ENST00000430071 C5orf38Q86SI9 138 aa10.92□□□□□ -0.66
UBE3D-204ENST00000430071 CHAC1Q9BUX1 264 aa10.92□□□□□ -0.66
UBE3D-204ENST00000430071 CST9LQ9H4G1 147 aa10.92□□□□□ -0.66
UBE3D-204ENST00000430071 COX7A2LO14548 114 aa10.91□□□□□ -0.66
UBE3D-204ENST00000430071 ATP5LO75964 103 aa10.91□□□□□ -0.66
UBE3D-204ENST00000430071 C14orf177Q52M58 125 aa10.91□□□□□ -0.66
UBE3D-204ENST00000430071 PANO1I0J062 215 aa10.9□□□□□ -0.66
UBE3D-204ENST00000430071 KRTAP10-4P60372 401 aaPredicted RBP10.9□□□□□ -0.66
UBE3D-204ENST00000430071 PMVKQ15126 192 aa10.9□□□□□ -0.66
UBE3D-204ENST00000430071 FAM19A3Q7Z5A8 133 aa10.9□□□□□ -0.66
UBE3D-204ENST00000430071 A0A0J9YXV3 536 aa10.9□□□□□ -0.67
UBE3D-204ENST00000430071 HIGD2BQ4VC39 106 aa10.9□□□□□ -0.67
UBE3D-204ENST00000430071 CFAP161Q6P656 301 aa10.9□□□□□ -0.67
UBE3D-204ENST00000430071 GVQW2A0A096LPI5 108 aaPredicted RBP10.89□□□□□ -0.67
UBE3D-204ENST00000430071 IGHV1-58A0A0C4DH39 117 aa10.89□□□□□ -0.67
UBE3D-204ENST00000430071 hDV102S1A0JD36 115 aa10.89□□□□□ -0.67
UBE3D-204ENST00000430071 SLPIP03973 132 aa10.89□□□□□ -0.67
UBE3D-204ENST00000430071 PKHD1L1Q86WI1 4243 aa10.89□□□□□ -0.67
UBE3D-204ENST00000430071 MALP21145 153 aa10.88□□□□□ -0.67
UBE3D-204ENST00000430071 NDUFA6P56556 154 aa10.88□□□□□ -0.67
UBE3D-204ENST00000430071 COA6Q5JTJ3 125 aaKnown RBP10.88□□□□□ -0.67
UBE3D-204ENST00000430071 C9orf163Q8N9P6 203 aa10.88□□□□□ -0.67
UBE3D-204ENST00000430071 IFI27L1Q96BM0 104 aa10.88□□□□□ -0.67
UBE3D-204ENST00000430071 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.88□□□□□ -0.67
UBE3D-204ENST00000430071 A0A087WZ39 114 aa10.87□□□□□ -0.67
UBE3D-204ENST00000430071 LINC00526Q96FQ7 95 aa10.87□□□□□ -0.67
UBE3D-204ENST00000430071 LRP1Q07954 4544 aaKnown RBP10.86□□□□□ -0.67
UBE3D-204ENST00000430071 TINCRA0A1B0GVN0 87 aa10.86□□□□□ -0.67
UBE3D-204ENST00000430071 LEPROTL1O95214 131 aa10.86□□□□□ -0.67
UBE3D-204ENST00000430071 PLA2G1BP04054 148 aaKnown RBP10.86□□□□□ -0.67
UBE3D-204ENST00000430071 HERVK_113P63121 156 aa10.86□□□□□ -0.67
UBE3D-204ENST00000430071 IGHV3-64A0A075B6Q5 118 aa10.85□□□□□ -0.67
UBE3D-204ENST00000430071 FABP4P15090 132 aa10.85□□□□□ -0.67
UBE3D-204ENST00000430071 SEC11AP67812 179 aa10.85□□□□□ -0.67
UBE3D-204ENST00000430071 SDIM1Q6ZPB5 146 aa10.85□□□□□ -0.67
UBE3D-204ENST00000430071 GEMIN7Q9H840 131 aaKnown RBP10.85□□□□□ -0.67
UBE3D-204ENST00000430071 CDKN2A-AS1Q9UH64 79 aa10.85□□□□□ -0.67
UBE3D-204ENST00000430071 IGLV4-69A0A075B6H9 119 aa10.84□□□□□ -0.67
UBE3D-204ENST00000430071 CNBPP62633 177 aaKnown RBP10.84□□□□□ -0.67
UBE3D-204ENST00000430071 IGLV5-45A0A087WSX0 123 aa10.83□□□□□ -0.68
UBE3D-204ENST00000430071 APOMO95445 188 aa10.83□□□□□ -0.68
UBE3D-204ENST00000430071 IGLC3P0DOY3 106 aa10.83□□□□□ -0.68
UBE3D-204ENST00000430071 TRAV12-1A0A0B4J245 112 aa10.82□□□□□ -0.68
UBE3D-204ENST00000430071 LINC01561Q8N1V8 128 aa10.82□□□□□ -0.68
UBE3D-204ENST00000430071 LINC00469Q8N7U9 141 aa10.82□□□□□ -0.68
UBE3D-204ENST00000430071 OR10D4PQ8NGN7 298 aa10.82□□□□□ -0.68
UBE3D-204ENST00000430071 ORAOV1Q8WV07 137 aa10.82□□□□□ -0.68
UBE3D-204ENST00000430071 HSPB8Q9UJY1 196 aa10.82□□□□□ -0.68
UBE3D-204ENST00000430071 ZNF561-AS1K7EIQ3 104 aa10.81□□□□□ -0.68
UBE3D-204ENST00000430071 SPAG11BQ08648 103 aa10.81□□□□□ -0.68
UBE3D-204ENST00000430071 CHTOPQ9Y3Y2 248 aaKnown RBP10.81□□□□□ -0.68
UBE3D-204ENST00000430071 CHTF8P0CG12 524 aa10.8□□□□□ -0.68
UBE3D-204ENST00000430071 FAT3Q8TDW7 4589 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms