RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 TIMM21Q9BVV7 248 aa8.28□□□□□ -1.08
CECR3-201ENST00000428828 SNRPD3P62318 126 aaKnown RBP8.27□□□□□ -1.09
CECR3-201ENST00000428828 SERP2Q8N6R1 65 aa8.27□□□□□ -1.09
CECR3-201ENST00000428828 UPK3BQ9BT76 320 aa8.27□□□□□ -1.09
CECR3-201ENST00000428828 TIMM17BO60830 172 aa8.27□□□□□ -1.09
CECR3-201ENST00000428828 DEFB131AP59861 70 aa8.27□□□□□ -1.09
CECR3-201ENST00000428828 APRG1Q8IVJ8 170 aa8.27□□□□□ -1.09
CECR3-201ENST00000428828 WFDC10AQ9H1F0 79 aa8.27□□□□□ -1.09
CECR3-201ENST00000428828 MAP6D1Q9H9H5 199 aa8.27□□□□□ -1.09
CECR3-201ENST00000428828 NOTCH1P46531 2555 aa8.26□□□□□ -1.09
CECR3-201ENST00000428828 TRBV6-5A0A0K0K1A5 114 aa8.26□□□□□ -1.09
CECR3-201ENST00000428828 hADV29S1A0JD25 119 aa8.26□□□□□ -1.09
CECR3-201ENST00000428828 F6UB75 175 aa8.26□□□□□ -1.09
CECR3-201ENST00000428828 I3L3M4 83 aa8.26□□□□□ -1.09
CECR3-201ENST00000428828 INAFM2P0DMQ5 153 aa8.26□□□□□ -1.09
CECR3-201ENST00000428828 KRTAP10-11P60412 298 aa8.26□□□□□ -1.09
CECR3-201ENST00000428828 MIAQ16674 131 aa8.26□□□□□ -1.09
CECR3-201ENST00000428828 ODF3L2Q3SX64 289 aa8.26□□□□□ -1.09
CECR3-201ENST00000428828 MGAM2Q2M2H8 2515 aa8.26□□□□□ -1.09
CECR3-201ENST00000428828 TRBV27A0A0K0K1C4 114 aa8.25□□□□□ -1.09
CECR3-201ENST00000428828 RHOHQ15669 191 aa8.25□□□□□ -1.09
CECR3-201ENST00000428828 BEAN1Q3B7T3 259 aa8.25□□□□□ -1.09
CECR3-201ENST00000428828 PRO0628Q9UI54 55 aa8.25□□□□□ -1.09
CECR3-201ENST00000428828 NBEAL1Q6ZS30 2694 aa8.25□□□□□ -1.09
CECR3-201ENST00000428828 MALP21145 153 aa8.25□□□□□ -1.09
CECR3-201ENST00000428828 KNCNA6PVL3 124 aa8.24□□□□□ -1.09
CECR3-201ENST00000428828 CLEC2BQ92478 149 aa8.24□□□□□ -1.09
CECR3-201ENST00000428828 TRAV13-1A0A0B4J241 112 aa8.23□□□□□ -1.09
CECR3-201ENST00000428828 TRAV21A0A0B4J279 112 aa8.23□□□□□ -1.09
CECR3-201ENST00000428828 PRB2P02812 416 aaPredicted RBP8.23□□□□□ -1.09
CECR3-201ENST00000428828 EGFEM1PQ0D2K5 195 aa8.23□□□□□ -1.09
CECR3-201ENST00000428828 KIF25-AS1Q9Y6Z4 181 aa8.23□□□□□ -1.09
CECR3-201ENST00000428828 EPM2AB3EWF7 344 aa8.23□□□□□ -1.09
CECR3-201ENST00000428828 OXTP01178 125 aa8.23□□□□□ -1.09
CECR3-201ENST00000428828 IGKV3-20P01619 116 aa8.23□□□□□ -1.09
CECR3-201ENST00000428828 LINC00315P59091 139 aa8.23□□□□□ -1.09
CECR3-201ENST00000428828 C4orf26Q17RF5 130 aa8.23□□□□□ -1.09
CECR3-201ENST00000428828 PHLDA3Q9Y5J5 127 aa8.23□□□□□ -1.09
CECR3-201ENST00000428828 TRAV8-3A0A0A6YYJ7 113 aa8.22□□□□□ -1.09
CECR3-201ENST00000428828 COX7A2LO14548 114 aa8.22□□□□□ -1.09
CECR3-201ENST00000428828 LINC00477Q96M19 166 aa8.22□□□□□ -1.09
CECR3-201ENST00000428828 JPT2Q9H910 190 aa8.22□□□□□ -1.09
CECR3-201ENST00000428828 NDUFC2O95298 119 aa8.21□□□□□ -1.09
CECR3-201ENST00000428828 MGPP08493 103 aa8.21□□□□□ -1.09
CECR3-201ENST00000428828 ZNF415Q09FC8 603 aa8.21□□□□□ -1.09
CECR3-201ENST00000428828 Q6JHZ5 121 aa8.21□□□□□ -1.09
CECR3-201ENST00000428828 HRCT1Q6UXD1 115 aa8.21□□□□□ -1.09
CECR3-201ENST00000428828 C19orf73Q9NVV2 129 aa8.21□□□□□ -1.09
CECR3-201ENST00000428828 PYGO1Q9Y3Y4 419 aa8.21□□□□□ -1.09
CECR3-201ENST00000428828 S100A4P26447 101 aaKnown RBP8.21□□□□□ -1.1
CECR3-201ENST00000428828 FAM19A4Q96LR4 140 aa8.21□□□□□ -1.1
CECR3-201ENST00000428828 IGHV3-30-3P0DP02 117 aa8.2□□□□□ -1.1
CECR3-201ENST00000428828 RNASE4P34096 147 aaKnown RBP8.2□□□□□ -1.1
CECR3-201ENST00000428828 CMC4P56277 68 aaPredicted RBP8.2□□□□□ -1.1
CECR3-201ENST00000428828 RPL39P62891 51 aaKnown RBP8.2□□□□□ -1.1
CECR3-201ENST00000428828 STHQ8IWL8 128 aa8.2□□□□□ -1.1
CECR3-201ENST00000428828 RPL35AP18077 110 aaKnown RBP8.19□□□□□ -1.1
CECR3-201ENST00000428828 DAZ2Q13117 558 aaKnown RBP8.19□□□□□ -1.1
CECR3-201ENST00000428828 DAZ4Q86SG3 579 aaKnown RBP8.19□□□□□ -1.1
CECR3-201ENST00000428828 DAZ3Q9NR90 486 aaKnown RBP8.19□□□□□ -1.1
CECR3-201ENST00000428828 DNAH3Q8TD57 4116 aa8.19□□□□□ -1.1
CECR3-201ENST00000428828 IGHV1-58A0A0C4DH39 117 aa8.19□□□□□ -1.1
CECR3-201ENST00000428828 MRPS36P82909 103 aaKnown RBP8.19□□□□□ -1.1
CECR3-201ENST00000428828 ZFAND2AQ8N6M9 145 aa8.19□□□□□ -1.1
CECR3-201ENST00000428828 COPS9Q8WXC6 57 aa8.19□□□□□ -1.1
CECR3-201ENST00000428828 CYSTM1Q9H1C7 97 aa8.19□□□□□ -1.1
CECR3-201ENST00000428828 SPRY2O43597 315 aa8.18□□□□□ -1.1
CECR3-201ENST00000428828 PRSS2P07478 247 aa8.18□□□□□ -1.1
CECR3-201ENST00000428828 TIRAPP58753 221 aa8.17□□□□□ -1.1
CECR3-201ENST00000428828 ADAMTSL4-AS1Q5T5F5 129 aa8.17□□□□□ -1.1
CECR3-201ENST00000428828 PRR9Q5T870 116 aa8.17□□□□□ -1.1
CECR3-201ENST00000428828 DSCR8Q96T75 97 aa8.17□□□□□ -1.1
CECR3-201ENST00000428828 NDUFA12Q9UI09 145 aa8.17□□□□□ -1.1
CECR3-201ENST00000428828 RBMY1BA6NDE4 496 aaKnown RBP8.17□□□□□ -1.1
CECR3-201ENST00000428828 RBMY1EA6NEQ0 496 aaKnown RBP8.17□□□□□ -1.1
CECR3-201ENST00000428828 RBMY1DP0C7P1 496 aaKnown RBP8.17□□□□□ -1.1
CECR3-201ENST00000428828 IGHV4-30-4P0DP06 118 aa8.17□□□□□ -1.1
CECR3-201ENST00000428828 RNASE3P12724 160 aaKnown RBP8.17□□□□□ -1.1
CECR3-201ENST00000428828 KPRPQ5T749 579 aaPredicted RBP8.17□□□□□ -1.1
CECR3-201ENST00000428828 SUMO4Q6EEV6 95 aa8.17□□□□□ -1.1
CECR3-201ENST00000428828 C20orf203Q8NBC4 194 aa8.17□□□□□ -1.1
CECR3-201ENST00000428828 SPINK13Q1W4C9 94 aa8.16□□□□□ -1.1
CECR3-201ENST00000428828 IGLV4-3A0A075B6K6 122 aa8.15□□□□□ -1.1
CECR3-201ENST00000428828 BAALC-AS2P0C853 105 aa8.15□□□□□ -1.1
CECR3-201ENST00000428828 C22orf24Q9Y442 160 aa8.15□□□□□ -1.1
CECR3-201ENST00000428828 TRAV12-2A0A075B6T6 113 aa8.15□□□□□ -1.11
CECR3-201ENST00000428828 A0A0J9YXV3 536 aa8.15□□□□□ -1.11
CECR3-201ENST00000428828 VSIG2Q96IQ7 327 aa8.15□□□□□ -1.11
CECR3-201ENST00000428828 OVOL2Q9BRP0 275 aa8.15□□□□□ -1.11
CECR3-201ENST00000428828 K7EIL1 84 aa8.14□□□□□ -1.11
CECR3-201ENST00000428828 PFN2P35080 140 aa8.14□□□□□ -1.11
CECR3-201ENST00000428828 NPC2P61916 151 aa8.14□□□□□ -1.11
CECR3-201ENST00000428828 SERP1Q9Y6X1 66 aa8.14□□□□□ -1.11
CECR3-201ENST00000428828 USP17L23D6RBM5 183 aa8.13□□□□□ -1.11
CECR3-201ENST00000428828 BCE1O60756 84 aa8.13□□□□□ -1.11
CECR3-201ENST00000428828 XCL2Q9UBD3 114 aa8.13□□□□□ -1.11
CECR3-201ENST00000428828 TINCRA0A1B0GVN0 87 aa8.13□□□□□ -1.11
CECR3-201ENST00000428828 C9orf85Q96MD7 179 aa8.13□□□□□ -1.11
CECR3-201ENST00000428828 OBSCN-AS1Q96MR7 158 aa8.13□□□□□ -1.11
CECR3-201ENST00000428828 A8MTW9 85 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms