RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 PLNP26678 52 aa5.31□□□□□ -1.56
HMGA1P4-201ENST00000428643 AKR1D1P51857 326 aa5.31□□□□□ -1.56
HMGA1P4-201ENST00000428643 SEC11AP67812 179 aa5.31□□□□□ -1.56
HMGA1P4-201ENST00000428643 ODF1Q14990 250 aa5.31□□□□□ -1.56
HMGA1P4-201ENST00000428643 LINC00242Q5T6M2 205 aa5.31□□□□□ -1.56
HMGA1P4-201ENST00000428643 PET117Q6UWS5 81 aa5.31□□□□□ -1.56
HMGA1P4-201ENST00000428643 LINC00469Q8N7U9 141 aa5.31□□□□□ -1.56
HMGA1P4-201ENST00000428643 MRPL35Q9NZE8 188 aaKnown RBP5.31□□□□□ -1.56
HMGA1P4-201ENST00000428643 CSMD3Q7Z407 3707 aa5.31□□□□□ -1.56
HMGA1P4-201ENST00000428643 IGLV4-69A0A075B6H9 119 aa5.3□□□□□ -1.56
HMGA1P4-201ENST00000428643 PSCAO43653 123 aa5.3□□□□□ -1.56
HMGA1P4-201ENST00000428643 DPM2O94777 84 aa5.3□□□□□ -1.56
HMGA1P4-201ENST00000428643 IGLC3P0DOY3 106 aa5.3□□□□□ -1.56
HMGA1P4-201ENST00000428643 LCE3BQ5TA77 95 aa5.3□□□□□ -1.56
HMGA1P4-201ENST00000428643 Q6ZR54 194 aa5.3□□□□□ -1.56
HMGA1P4-201ENST00000428643 SPATA12Q7Z6I5 190 aa5.3□□□□□ -1.56
HMGA1P4-201ENST00000428643 NFE4Q86UQ8 179 aa5.3□□□□□ -1.56
HMGA1P4-201ENST00000428643 TM2D2Q9BX73 214 aa5.3□□□□□ -1.56
HMGA1P4-201ENST00000428643 STARD9Q9P2P6 4700 aa5.29□□□□□ -1.56
HMGA1P4-201ENST00000428643 BIRC6Q9NR09 4857 aa5.29□□□□□ -1.56
HMGA1P4-201ENST00000428643 TINCRA0A1B0GVN0 87 aa5.29□□□□□ -1.56
HMGA1P4-201ENST00000428643 C11orf86A6NJI1 115 aa5.29□□□□□ -1.56
HMGA1P4-201ENST00000428643 COX7A2LO14548 114 aa5.29□□□□□ -1.56
HMGA1P4-201ENST00000428643 SCGB1D1O95968 90 aa5.29□□□□□ -1.56
HMGA1P4-201ENST00000428643 MALP21145 153 aa5.29□□□□□ -1.56
HMGA1P4-201ENST00000428643 HERVK_113P63121 156 aa5.29□□□□□ -1.56
HMGA1P4-201ENST00000428643 TMEM170BQ5T4T1 132 aa5.29□□□□□ -1.56
HMGA1P4-201ENST00000428643 LINC01545Q5VT33 79 aa5.29□□□□□ -1.56
HMGA1P4-201ENST00000428643 CD164L2Q6UWJ8 174 aa5.29□□□□□ -1.56
HMGA1P4-201ENST00000428643 C6orf223Q8N319 242 aa5.29□□□□□ -1.56
HMGA1P4-201ENST00000428643 KRTAP9-9Q9BYP9 154 aa5.29□□□□□ -1.56
HMGA1P4-201ENST00000428643 KRTAP9-4Q9BYQ2 154 aa5.29□□□□□ -1.56
HMGA1P4-201ENST00000428643 COX11Q9Y6N1 276 aa5.29□□□□□ -1.56
HMGA1P4-201ENST00000428643 H3BRM9 83 aa5.28□□□□□ -1.56
HMGA1P4-201ENST00000428643 IGKCP01834 107 aa5.28□□□□□ -1.56
HMGA1P4-201ENST00000428643 COX6A2Q02221 97 aa5.28□□□□□ -1.56
HMGA1P4-201ENST00000428643 FOXI1Q12951 378 aa5.28□□□□□ -1.56
HMGA1P4-201ENST00000428643 C1orf134Q5TEV5 83 aa5.28□□□□□ -1.56
HMGA1P4-201ENST00000428643 C5orf38Q86SI9 138 aa5.28□□□□□ -1.56
HMGA1P4-201ENST00000428643 ATOH7Q8N100 152 aa5.28□□□□□ -1.56
HMGA1P4-201ENST00000428643 PLECQ15149 4684 aaKnown RBP5.27□□□□□ -1.57
HMGA1P4-201ENST00000428643 IGLV5-45A0A087WSX0 123 aa5.27□□□□□ -1.57
HMGA1P4-201ENST00000428643 IGHV3OR16-9A0A0B4J2B5 98 aa5.27□□□□□ -1.57
HMGA1P4-201ENST00000428643 SPINK8P0C7L1 97 aa5.27□□□□□ -1.57
HMGA1P4-201ENST00000428643 ZNF22P17026 224 aaPredicted RBP5.27□□□□□ -1.57
HMGA1P4-201ENST00000428643 FAM19A3Q7Z5A8 133 aa5.27□□□□□ -1.57
HMGA1P4-201ENST00000428643 CDKN2A-AS1Q9UH64 79 aa5.27□□□□□ -1.57
HMGA1P4-201ENST00000428643 IGHV3-64A0A075B6Q5 118 aa5.26□□□□□ -1.57
HMGA1P4-201ENST00000428643 A0A087WZ39 114 aa5.26□□□□□ -1.57
HMGA1P4-201ENST00000428643 LECT2O14960 151 aa5.26□□□□□ -1.57
HMGA1P4-201ENST00000428643 HERVK_113P61574 105 aa5.26□□□□□ -1.57
HMGA1P4-201ENST00000428643 KRTAP26-1Q6PEX3 210 aa5.26□□□□□ -1.57
HMGA1P4-201ENST00000428643 Q6ZRN7 208 aaPredicted RBP5.26□□□□□ -1.57
HMGA1P4-201ENST00000428643 IGHV1-58A0A0C4DH39 117 aa5.25□□□□□ -1.57
HMGA1P4-201ENST00000428643 SMIM1B2RUZ4 78 aa5.25□□□□□ -1.57
HMGA1P4-201ENST00000428643 HSBP1L1C9JCN9 74 aa5.25□□□□□ -1.57
HMGA1P4-201ENST00000428643 USP17L23D6RBM5 183 aa5.25□□□□□ -1.57
HMGA1P4-201ENST00000428643 APOMO95445 188 aa5.25□□□□□ -1.57
HMGA1P4-201ENST00000428643 JOSD1Q15040 202 aaPredicted RBP5.25□□□□□ -1.57
HMGA1P4-201ENST00000428643 CFAP161Q6P656 301 aa5.25□□□□□ -1.57
HMGA1P4-201ENST00000428643 MAPKAPK5-AS1Q8N8E1 139 aa5.25□□□□□ -1.57
HMGA1P4-201ENST00000428643 ORAOV1Q8WV07 137 aa5.25□□□□□ -1.57
HMGA1P4-201ENST00000428643 LOC105371267A0A1B0GV96 52 aa5.24□□□□□ -1.57
HMGA1P4-201ENST00000428643 TMEM223A0PJW6 202 aa5.24□□□□□ -1.57
HMGA1P4-201ENST00000428643 PRSS2P07478 247 aa5.24□□□□□ -1.57
HMGA1P4-201ENST00000428643 SPAG11BQ08648 103 aa5.24□□□□□ -1.57
HMGA1P4-201ENST00000428643 HIGD2BQ4VC39 106 aa5.24□□□□□ -1.57
HMGA1P4-201ENST00000428643 PYY3Q5JQD4 70 aa5.24□□□□□ -1.57
HMGA1P4-201ENST00000428643 TOMM7Q9P0U1 55 aa5.24□□□□□ -1.57
HMGA1P4-201ENST00000428643 HYDINQ4G0P3 5121 aa5.24□□□□□ -1.57
HMGA1P4-201ENST00000428643 hDV102S1A0JD36 115 aa5.23□□□□□ -1.57
HMGA1P4-201ENST00000428643 WFDC2Q14508 124 aa5.23□□□□□ -1.57
HMGA1P4-201ENST00000428643 LINC01561Q8N1V8 128 aa5.23□□□□□ -1.57
HMGA1P4-201ENST00000428643 STPG4Q8N801 248 aa5.23□□□□□ -1.57
HMGA1P4-201ENST00000428643 C15orf56Q8N910 161 aa5.23□□□□□ -1.57
HMGA1P4-201ENST00000428643 ALMS1Q8TCU4 4167 aa5.22□□□□□ -1.57
HMGA1P4-201ENST00000428643 GVQW2A0A096LPI5 108 aaPredicted RBP5.22□□□□□ -1.57
HMGA1P4-201ENST00000428643 ZNF561-AS1K7EIQ3 104 aa5.22□□□□□ -1.57
HMGA1P4-201ENST00000428643 RTL8CO15255 209 aa5.22□□□□□ -1.57
HMGA1P4-201ENST00000428643 SMIM6P0DI80 62 aa5.22□□□□□ -1.57
HMGA1P4-201ENST00000428643 MAJINQ3KP22 176 aa5.22□□□□□ -1.57
HMGA1P4-201ENST00000428643 C14orf177Q52M58 125 aa5.22□□□□□ -1.57
HMGA1P4-201ENST00000428643 COX7B2Q8TF08 81 aa5.22□□□□□ -1.57
HMGA1P4-201ENST00000428643 VAMP8Q9BV40 100 aa5.22□□□□□ -1.57
HMGA1P4-201ENST00000428643 A0A087WTM6 91 aa5.21□□□□□ -1.58
HMGA1P4-201ENST00000428643 IGLV5-39A0A0G2JS06 123 aa5.21□□□□□ -1.58
HMGA1P4-201ENST00000428643 E9PLD3 99 aa5.21□□□□□ -1.58
HMGA1P4-201ENST00000428643 EREGO14944 169 aa5.21□□□□□ -1.58
HMGA1P4-201ENST00000428643 LEPROTO15243 131 aa5.21□□□□□ -1.58
HMGA1P4-201ENST00000428643 LGALS3P17931 250 aaKnown RBP5.21□□□□□ -1.58
HMGA1P4-201ENST00000428643 NMUP48645 174 aa5.21□□□□□ -1.58
HMGA1P4-201ENST00000428643 CKS1BP61024 79 aa5.21□□□□□ -1.58
HMGA1P4-201ENST00000428643 S100A12P80511 92 aa5.21□□□□□ -1.58
HMGA1P4-201ENST00000428643 TNP2Q05952 138 aa5.21□□□□□ -1.58
HMGA1P4-201ENST00000428643 ANKRD39Q53RE8 183 aa5.21□□□□□ -1.58
HMGA1P4-201ENST00000428643 PLEKHB2Q96CS7 222 aa5.21□□□□□ -1.58
HMGA1P4-201ENST00000428643 LINC00526Q96FQ7 95 aa5.21□□□□□ -1.58
HMGA1P4-201ENST00000428643 PAM16Q9Y3D7 125 aa5.21□□□□□ -1.58
HMGA1P4-201ENST00000428643 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.2□□□□□ -1.58
HMGA1P4-201ENST00000428643 LRCOL1A6NCL2 159 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms