RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 FABP2P12104 132 aa7.26□□□□□ -1.25
HDAC9-210ENST00000428307 SPANXB1Q9NS25 103 aaPredicted RBP7.26□□□□□ -1.25
HDAC9-210ENST00000428307 ANK2Q01484 3957 aa7.26□□□□□ -1.25
HDAC9-210ENST00000428307 PRSS2P07478 247 aa7.25□□□□□ -1.25
HDAC9-210ENST00000428307 RETNQ9HD89 108 aa7.25□□□□□ -1.25
HDAC9-210ENST00000428307 SPCS1Q9Y6A9 102 aa7.25□□□□□ -1.25
HDAC9-210ENST00000428307 A0A1B0GWB2 263 aa7.25□□□□□ -1.25
HDAC9-210ENST00000428307 ATP5G1P05496 136 aa7.25□□□□□ -1.25
HDAC9-210ENST00000428307 G3V4G9 280 aa7.24□□□□□ -1.25
HDAC9-210ENST00000428307 ADAMTSL4-AS1Q5T5F5 129 aa7.24□□□□□ -1.25
HDAC9-210ENST00000428307 SFTA2Q6UW10 78 aa7.24□□□□□ -1.25
HDAC9-210ENST00000428307 GTF2H5Q6ZYL4 71 aa7.24□□□□□ -1.25
HDAC9-210ENST00000428307 MUSTN1Q8IVN3 82 aa7.24□□□□□ -1.25
HDAC9-210ENST00000428307 ZNF625Q96I27 306 aaPredicted RBP7.24□□□□□ -1.25
HDAC9-210ENST00000428307 SMIM1B2RUZ4 78 aa7.24□□□□□ -1.25
HDAC9-210ENST00000428307 TMEM238C9JI98 176 aa7.24□□□□□ -1.25
HDAC9-210ENST00000428307 K7EP34 96 aa7.24□□□□□ -1.25
HDAC9-210ENST00000428307 ZFAND6Q6FIF0 208 aa7.24□□□□□ -1.25
HDAC9-210ENST00000428307 PGPEP1Q9NXJ5 209 aa7.24□□□□□ -1.25
HDAC9-210ENST00000428307 A4D1N5 150 aa7.23□□□□□ -1.25
HDAC9-210ENST00000428307 CFC1BP0CG36 223 aa7.23□□□□□ -1.25
HDAC9-210ENST00000428307 CFC1P0CG37 223 aa7.23□□□□□ -1.25
HDAC9-210ENST00000428307 NPC2P61916 151 aa7.23□□□□□ -1.25
HDAC9-210ENST00000428307 FAM19A3Q7Z5A8 133 aa7.23□□□□□ -1.25
HDAC9-210ENST00000428307 IGLV5-39A0A0G2JS06 123 aa7.23□□□□□ -1.25
HDAC9-210ENST00000428307 EGFEM1PQ0D2K5 195 aa7.23□□□□□ -1.25
HDAC9-210ENST00000428307 DAND5Q8N907 189 aa7.23□□□□□ -1.25
HDAC9-210ENST00000428307 LITAFQ99732 161 aa7.23□□□□□ -1.25
HDAC9-210ENST00000428307 Q9H8V8 135 aa7.23□□□□□ -1.25
HDAC9-210ENST00000428307 A0A0U1RRA0 63 aa7.22□□□□□ -1.25
HDAC9-210ENST00000428307 RBX1P62877 108 aa7.22□□□□□ -1.25
HDAC9-210ENST00000428307 CLPSL2Q6UWE3 100 aa7.22□□□□□ -1.25
HDAC9-210ENST00000428307 Q8N3U1 123 aa7.21□□□□□ -1.26
HDAC9-210ENST00000428307 NBEAL1Q6ZS30 2694 aa7.21□□□□□ -1.26
HDAC9-210ENST00000428307 NDUFA1O15239 70 aa7.2□□□□□ -1.26
HDAC9-210ENST00000428307 PRB2P02812 416 aaPredicted RBP7.2□□□□□ -1.26
HDAC9-210ENST00000428307 RPL24P83731 157 aaKnown RBP7.2□□□□□ -1.26
HDAC9-210ENST00000428307 TSPAN13O95857 204 aa7.2□□□□□ -1.26
HDAC9-210ENST00000428307 C5orf38Q86SI9 138 aa7.2□□□□□ -1.26
HDAC9-210ENST00000428307 TOMM7Q9P0U1 55 aa7.2□□□□□ -1.26
HDAC9-210ENST00000428307 TENM3Q9P273 2699 aa7.2□□□□□ -1.26
HDAC9-210ENST00000428307 LOC107984156A0A0G2JMH3 177 aa7.19□□□□□ -1.26
HDAC9-210ENST00000428307 LINC00959A0A1B0GUT2 108 aa7.19□□□□□ -1.26
HDAC9-210ENST00000428307 H7C2G1 150 aa7.19□□□□□ -1.26
HDAC9-210ENST00000428307 EIF4EBP3O60516 100 aaPredicted RBP7.19□□□□□ -1.26
HDAC9-210ENST00000428307 XCL1P47992 114 aa7.19□□□□□ -1.26
HDAC9-210ENST00000428307 ARL17AQ8IVW1 177 aa7.19□□□□□ -1.26
HDAC9-210ENST00000428307 IGHV3OR16-9A0A0B4J2B5 98 aa7.19□□□□□ -1.26
HDAC9-210ENST00000428307 A0A1B0GUV1 79 aa7.19□□□□□ -1.26
HDAC9-210ENST00000428307 MRPL23Q16540 153 aaKnown RBP7.19□□□□□ -1.26
HDAC9-210ENST00000428307 PRO1854Q9UHT4 67 aa7.19□□□□□ -1.26
HDAC9-210ENST00000428307 H3BMG7 143 aa7.18□□□□□ -1.26
HDAC9-210ENST00000428307 MIAQ16674 131 aa7.18□□□□□ -1.26
HDAC9-210ENST00000428307 MGAM2Q2M2H8 2515 aa7.18□□□□□ -1.26
HDAC9-210ENST00000428307 CMYA5Q8N3K9 4069 aa7.18□□□□□ -1.26
HDAC9-210ENST00000428307 CIRBPQ14011 172 aaKnown RBP7.18□□□□□ -1.26
HDAC9-210ENST00000428307 LINC00269Q8N2A0 174 aa7.18□□□□□ -1.26
HDAC9-210ENST00000428307 MEIG1Q5JSS6 88 aa7.17□□□□□ -1.26
HDAC9-210ENST00000428307 SPANXDQ9BXN6 97 aa7.17□□□□□ -1.26
HDAC9-210ENST00000428307 SPANXCQ9NY87 97 aa7.17□□□□□ -1.26
HDAC9-210ENST00000428307 ANGP03950 147 aaKnown RBP7.17□□□□□ -1.26
HDAC9-210ENST00000428307 ICOSQ9Y6W8 199 aa7.17□□□□□ -1.26
HDAC9-210ENST00000428307 IGLV10-54A0A075B6I4 117 aa7.16□□□□□ -1.26
HDAC9-210ENST00000428307 SS18Q15532 418 aa7.16□□□□□ -1.26
HDAC9-210ENST00000428307 Q6ZTC4 211 aa7.16□□□□□ -1.26
HDAC9-210ENST00000428307 MTURNQ8N3F0 131 aa7.16□□□□□ -1.26
HDAC9-210ENST00000428307 COX7B2Q8TF08 81 aa7.16□□□□□ -1.26
HDAC9-210ENST00000428307 A0A087WZ39 114 aa7.16□□□□□ -1.26
HDAC9-210ENST00000428307 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.16□□□□□ -1.26
HDAC9-210ENST00000428307 A0A0J9YWU9 116 aa7.15□□□□□ -1.26
HDAC9-210ENST00000428307 TIMM17BO60830 172 aa7.15□□□□□ -1.26
HDAC9-210ENST00000428307 A0A0B4J2C4 111 aa7.15□□□□□ -1.27
HDAC9-210ENST00000428307 TEX48A0A1B0GUV7 120 aa7.15□□□□□ -1.27
HDAC9-210ENST00000428307 IGHV3-33P01772 117 aa7.15□□□□□ -1.27
HDAC9-210ENST00000428307 SCGB1C2P0DMR2 95 aa7.15□□□□□ -1.27
HDAC9-210ENST00000428307 C11orf68Q9H3H3 251 aaKnown RBP7.15□□□□□ -1.27
HDAC9-210ENST00000428307 ERG28Q9UKR5 140 aa7.15□□□□□ -1.27
HDAC9-210ENST00000428307 PSMB2P49721 201 aa7.14□□□□□ -1.27
HDAC9-210ENST00000428307 REG3AQ06141 175 aa7.14□□□□□ -1.27
HDAC9-210ENST00000428307 Q1RN00 199 aa7.14□□□□□ -1.27
HDAC9-210ENST00000428307 LINC00308Q8TCZ7 52 aa7.14□□□□□ -1.27
HDAC9-210ENST00000428307 NANOS2P60321 138 aaKnown RBP7.13□□□□□ -1.27
HDAC9-210ENST00000428307 HERV-K104P63124 156 aa7.13□□□□□ -1.27
HDAC9-210ENST00000428307 LELP1Q5T871 98 aa7.13□□□□□ -1.27
HDAC9-210ENST00000428307 MRAPQ8TCY5 172 aa7.13□□□□□ -1.27
HDAC9-210ENST00000428307 IFITM1P13164 125 aa7.13□□□□□ -1.27
HDAC9-210ENST00000428307 C6orf226Q5I0X4 101 aa7.13□□□□□ -1.27
HDAC9-210ENST00000428307 DEFB121Q5J5C9 76 aa7.13□□□□□ -1.27
HDAC9-210ENST00000428307 KPRPQ5T749 579 aaPredicted RBP7.13□□□□□ -1.27
HDAC9-210ENST00000428307 LYPD5Q6UWN5 251 aa7.13□□□□□ -1.27
HDAC9-210ENST00000428307 WFDC2Q14508 124 aa7.12□□□□□ -1.27
HDAC9-210ENST00000428307 SOSTDC1Q6X4U4 206 aa7.12□□□□□ -1.27
HDAC9-210ENST00000428307 SH2D6Q7Z4S9 175 aa7.12□□□□□ -1.27
HDAC9-210ENST00000428307 OCIAD2Q56VL3 154 aa7.12□□□□□ -1.27
HDAC9-210ENST00000428307 CHCHD10Q8WYQ3 142 aaPredicted RBP7.12□□□□□ -1.27
HDAC9-210ENST00000428307 KLK12Q9UKR0 248 aa7.12□□□□□ -1.27
HDAC9-210ENST00000428307 TCL1BO95988 128 aa7.11□□□□□ -1.27
HDAC9-210ENST00000428307 C11orf45Q8TAV5 145 aa7.11□□□□□ -1.27
HDAC9-210ENST00000428307 PFN2P35080 140 aa7.11□□□□□ -1.27
HDAC9-210ENST00000428307 LINC00158P58513 81 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms