RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 LINC00526Q96FQ7 95 aa12.19□□□□□ -0.46
COL9A2-204ENST00000427563 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.18□□□□□ -0.46
COL9A2-204ENST00000427563 PRSS3P2Q8NHM4 247 aa12.18□□□□□ -0.46
COL9A2-204ENST00000427563 SPACA4Q8TDM5 124 aa12.18□□□□□ -0.46
COL9A2-204ENST00000427563 K7EMI3 77 aa12.17□□□□□ -0.46
COL9A2-204ENST00000427563 SS18Q15532 418 aa12.17□□□□□ -0.46
COL9A2-204ENST00000427563 CD164L2Q6UWJ8 174 aa12.17□□□□□ -0.46
COL9A2-204ENST00000427563 TIMM21Q9BVV7 248 aa12.17□□□□□ -0.46
COL9A2-204ENST00000427563 LINC01546A6NGU7 62 aa12.16□□□□□ -0.46
COL9A2-204ENST00000427563 HNRNPA3P51991 378 aaKnown RBP12.16□□□□□ -0.46
COL9A2-204ENST00000427563 COX6A2Q02221 97 aa12.16□□□□□ -0.46
COL9A2-204ENST00000427563 A0A087WYN8 130 aa12.15□□□□□ -0.46
COL9A2-204ENST00000427563 IGHV1-58A0A0C4DH39 117 aa12.15□□□□□ -0.46
COL9A2-204ENST00000427563 ORMDL2Q53FV1 153 aa12.15□□□□□ -0.46
COL9A2-204ENST00000427563 FA2HQ7L5A8 372 aa12.15□□□□□ -0.46
COL9A2-204ENST00000427563 URB1-AS1Q96HZ7 61 aa12.15□□□□□ -0.46
COL9A2-204ENST00000427563 RPL37AP61513 92 aaKnown RBP12.14□□□□□ -0.47
COL9A2-204ENST00000427563 TMEM18Q96B42 140 aa12.14□□□□□ -0.47
COL9A2-204ENST00000427563 OPRPNQ99935 248 aaPredicted RBP12.14□□□□□ -0.47
COL9A2-204ENST00000427563 TRAV13-1A0A0B4J241 112 aa12.13□□□□□ -0.47
COL9A2-204ENST00000427563 C1orf196B1AJZ1 125 aa12.12□□□□□ -0.47
COL9A2-204ENST00000427563 KRTAP29-1A8MX34 341 aaPredicted RBP12.11□□□□□ -0.47
COL9A2-204ENST00000427563 LINC00614P0C842 121 aa12.11□□□□□ -0.47
COL9A2-204ENST00000427563 RAB5BP61020 215 aa12.11□□□□□ -0.47
COL9A2-204ENST00000427563 SMAGPQ0VAQ4 97 aa12.11□□□□□ -0.47
COL9A2-204ENST00000427563 C2orf66Q6UXQ4 117 aa12.11□□□□□ -0.47
COL9A2-204ENST00000427563 PLAC8Q9NZF1 115 aa12.11□□□□□ -0.47
COL9A2-204ENST00000427563 A0A096LNI7 61 aa12.1□□□□□ -0.47
COL9A2-204ENST00000427563 SPANXA1Q9NS26 97 aa12.1□□□□□ -0.47
COL9A2-204ENST00000427563 CYSLTR1Q9Y271 337 aa12.1□□□□□ -0.47
COL9A2-204ENST00000427563 IGKV2-24A0A0C4DH68 120 aa12.09□□□□□ -0.47
COL9A2-204ENST00000427563 C5orf38Q86SI9 138 aa12.09□□□□□ -0.47
COL9A2-204ENST00000427563 IGLV4-69A0A075B6H9 119 aa12.08□□□□□ -0.48
COL9A2-204ENST00000427563 COX7A2LO14548 114 aa12.08□□□□□ -0.48
COL9A2-204ENST00000427563 HIST1H2BKO60814 126 aa12.08□□□□□ -0.48
COL9A2-204ENST00000427563 HIST1H2BJP06899 126 aa12.08□□□□□ -0.48
COL9A2-204ENST00000427563 HIST1H2BOP23527 126 aa12.08□□□□□ -0.48
COL9A2-204ENST00000427563 G0S2P27469 103 aa12.08□□□□□ -0.48
COL9A2-204ENST00000427563 HIST1H2BBP33778 126 aa12.08□□□□□ -0.48
COL9A2-204ENST00000427563 HIST1H2BDP58876 126 aa12.08□□□□□ -0.48
COL9A2-204ENST00000427563 HIST1H2BCP62807 126 aa12.08□□□□□ -0.48
COL9A2-204ENST00000427563 MRPS36P82909 103 aaKnown RBP12.08□□□□□ -0.48
COL9A2-204ENST00000427563 HIST2H2BEQ16778 126 aa12.08□□□□□ -0.48
COL9A2-204ENST00000427563 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.08□□□□□ -0.48
COL9A2-204ENST00000427563 BAGE3Q86Y29 109 aa12.08□□□□□ -0.48
COL9A2-204ENST00000427563 HIST1H2BHQ93079 126 aa12.08□□□□□ -0.48
COL9A2-204ENST00000427563 CARD19Q96LW7 228 aa12.08□□□□□ -0.48
COL9A2-204ENST00000427563 HIST1H2BNQ99877 126 aa12.08□□□□□ -0.48
COL9A2-204ENST00000427563 HIST1H2BMQ99879 126 aa12.08□□□□□ -0.48
COL9A2-204ENST00000427563 MAJINQ3KP22 176 aa12.07□□□□□ -0.48
COL9A2-204ENST00000427563 TOMM6Q96B49 74 aa12.07□□□□□ -0.48
COL9A2-204ENST00000427563 CHCHD1Q96BP2 118 aaKnown RBP12.07□□□□□ -0.48
COL9A2-204ENST00000427563 PYGO1Q9Y3Y4 419 aa12.07□□□□□ -0.48
COL9A2-204ENST00000427563 A0A096LNJ9 63 aa12.06□□□□□ -0.48
COL9A2-204ENST00000427563 LINC00310P59036 64 aa12.06□□□□□ -0.48
COL9A2-204ENST00000427563 SYCNQ0VAF6 134 aa12.06□□□□□ -0.48
COL9A2-204ENST00000427563 Q6ZRU5 148 aa12.06□□□□□ -0.48
COL9A2-204ENST00000427563 DPH3Q96FX2 82 aa12.06□□□□□ -0.48
COL9A2-204ENST00000427563 J3QL48 77 aa12.05□□□□□ -0.48
COL9A2-204ENST00000427563 ZNF561-AS1K7EIQ3 104 aa12.05□□□□□ -0.48
COL9A2-204ENST00000427563 IGLV4-3A0A075B6K6 122 aa12.04□□□□□ -0.48
COL9A2-204ENST00000427563 IGHV3OR16-9A0A0B4J2B5 98 aa12.04□□□□□ -0.48
COL9A2-204ENST00000427563 LINC01549A6NIU2 74 aa12.04□□□□□ -0.48
COL9A2-204ENST00000427563 IGIPA6NJ69 53 aa12.04□□□□□ -0.48
COL9A2-204ENST00000427563 MALP21145 153 aa12.04□□□□□ -0.48
COL9A2-204ENST00000427563 STPG4Q8N801 248 aa12.04□□□□□ -0.48
COL9A2-204ENST00000427563 SERF1AO75920 110 aa12.03□□□□□ -0.48
COL9A2-204ENST00000427563 HBDP02042 147 aa12.03□□□□□ -0.48
COL9A2-204ENST00000427563 PMCHL1Q16048 86 aa12.03□□□□□ -0.48
COL9A2-204ENST00000427563 TIMM17AQ99595 171 aa12.03□□□□□ -0.48
COL9A2-204ENST00000427563 IFITM10A6NMD0 228 aa12.02□□□□□ -0.49
COL9A2-204ENST00000427563 NPSP0C0P6 89 aa12.02□□□□□ -0.49
COL9A2-204ENST00000427563 HSBP1O75506 76 aa12.01□□□□□ -0.49
COL9A2-204ENST00000427563 ZC2HC1BQ5TFG8 222 aa12.01□□□□□ -0.49
COL9A2-204ENST00000427563 ERASQ7Z444 233 aa12.01□□□□□ -0.49
COL9A2-204ENST00000427563 SCGB3A1Q96QR1 104 aa12.01□□□□□ -0.49
COL9A2-204ENST00000427563 NUPR1O60356 82 aa12□□□□□ -0.49
COL9A2-204ENST00000427563 SPAG11BQ08648 103 aa12□□□□□ -0.49
COL9A2-204ENST00000427563 PDZD11Q5EBL8 140 aa12□□□□□ -0.49
COL9A2-204ENST00000427563 LINC00173Q6ZV60 143 aa12□□□□□ -0.49
COL9A2-204ENST00000427563 TMEM141Q96I45 108 aa12□□□□□ -0.49
COL9A2-204ENST00000427563 C2orf48Q96LS8 159 aa12□□□□□ -0.49
COL9A2-204ENST00000427563 OXTP01178 125 aa11.99□□□□□ -0.49
COL9A2-204ENST00000427563 PTTG1IPP53801 180 aa11.99□□□□□ -0.49
COL9A2-204ENST00000427563 LINC00242Q5T6M2 205 aa11.99□□□□□ -0.49
COL9A2-204ENST00000427563 CAMK2N2Q96S95 79 aa11.99□□□□□ -0.49
COL9A2-204ENST00000427563 A0A0J9YXV3 536 aa11.98□□□□□ -0.49
COL9A2-204ENST00000427563 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.98□□□□□ -0.49
COL9A2-204ENST00000427563 Q6ZN92 141 aa11.98□□□□□ -0.49
COL9A2-204ENST00000427563 FAM19A2Q8N3H0 131 aa11.98□□□□□ -0.49
COL9A2-204ENST00000427563 AMELXQ99217 191 aa11.98□□□□□ -0.49
COL9A2-204ENST00000427563 LOC107984640A0A0U1RRK4 108 aa11.97□□□□□ -0.49
COL9A2-204ENST00000427563 APOMO95445 188 aa11.97□□□□□ -0.49
COL9A2-204ENST00000427563 COA6Q5JTJ3 125 aaKnown RBP11.97□□□□□ -0.49
COL9A2-204ENST00000427563 PAPPA-AS1Q5QFB9 102 aa11.97□□□□□ -0.49
COL9A2-204ENST00000427563 TEX43Q6ZNM6 134 aa11.97□□□□□ -0.49
COL9A2-204ENST00000427563 OR10D4PQ8NGN7 298 aa11.97□□□□□ -0.49
COL9A2-204ENST00000427563 ORAOV1Q8WV07 137 aa11.97□□□□□ -0.49
COL9A2-204ENST00000427563 UBE2D1P51668 147 aa11.96□□□□□ -0.49
COL9A2-204ENST00000427563 C10orf25Q5T742 122 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms