RNA–Protein interactions for RNA: ENST00000426921.5

UBXN4-204, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-204ENST00000426921 PPBPP02775 128 aa12.89□□□□□ -0.35
UBXN4-204ENST00000426921 MRPS36P82909 103 aaKnown RBP12.89□□□□□ -0.35
UBXN4-204ENST00000426921 SPAG11BQ08648 103 aa12.89□□□□□ -0.35
UBXN4-204ENST00000426921 RNF151Q2KHN1 245 aa12.89□□□□□ -0.35
UBXN4-204ENST00000426921 MRPL54Q6P161 138 aaKnown RBP12.89□□□□□ -0.35
UBXN4-204ENST00000426921 IGHV3OR16-9A0A0B4J2B5 98 aa12.88□□□□□ -0.35
UBXN4-204ENST00000426921 A0A1W2PNN7 141 aa12.88□□□□□ -0.35
UBXN4-204ENST00000426921 NPYP01303 97 aa12.88□□□□□ -0.35
UBXN4-204ENST00000426921 REG3GQ6UW15 175 aa12.88□□□□□ -0.35
UBXN4-204ENST00000426921 LRP2P98164 4655 aa12.86□□□□□ -0.35
UBXN4-204ENST00000426921 F8WDY8 70 aa12.86□□□□□ -0.35
UBXN4-204ENST00000426921 KRTAP10-8P60410 259 aa12.86□□□□□ -0.35
UBXN4-204ENST00000426921 MRPL35Q9NZE8 188 aaKnown RBP12.86□□□□□ -0.35
UBXN4-204ENST00000426921 C9orf116Q5BN46 136 aaPredicted RBP12.85□□□□□ -0.35
UBXN4-204ENST00000426921 ATP5L2Q7Z4Y8 100 aa12.85□□□□□ -0.35
UBXN4-204ENST00000426921 RPL18AQ02543 176 aaKnown RBP12.84□□□□□ -0.35
UBXN4-204ENST00000426921 ORMDL3Q8N138 153 aa12.84□□□□□ -0.35
UBXN4-204ENST00000426921 OPRPNQ99935 248 aaPredicted RBP12.84□□□□□ -0.35
UBXN4-204ENST00000426921 ORAOV1Q8WV07 137 aa12.83□□□□□ -0.36
UBXN4-204ENST00000426921 IFITM10A6NMD0 228 aa12.82□□□□□ -0.36
UBXN4-204ENST00000426921 PSORS1C2Q9UIG4 136 aa12.81□□□□□ -0.36
UBXN4-204ENST00000426921 PYGO1Q9Y3Y4 419 aa12.81□□□□□ -0.36
UBXN4-204ENST00000426921 NDUFA1O15239 70 aa12.8□□□□□ -0.36
UBXN4-204ENST00000426921 TLX1NBP0CAT3 122 aa12.8□□□□□ -0.36
UBXN4-204ENST00000426921 IFI27P40305 119 aaPredicted RBP12.8□□□□□ -0.36
UBXN4-204ENST00000426921 TMEM136Q6ZRR5 245 aa12.8□□□□□ -0.36
UBXN4-204ENST00000426921 PRELID3AQ96N28 172 aa12.8□□□□□ -0.36
UBXN4-204ENST00000426921 IMMP2LQ96T52 175 aa12.8□□□□□ -0.36
UBXN4-204ENST00000426921 PRSS47A8MTI9 375 aa12.79□□□□□ -0.36
UBXN4-204ENST00000426921 ODF1Q14990 250 aa12.79□□□□□ -0.36
UBXN4-204ENST00000426921 LAMTOR2Q9Y2Q5 125 aa12.79□□□□□ -0.36
UBXN4-204ENST00000426921 A0A087WZ39 114 aa12.78□□□□□ -0.36
UBXN4-204ENST00000426921 RAB5AP20339 215 aa12.78□□□□□ -0.36
UBXN4-204ENST00000426921 C10orf25Q5T742 122 aa12.78□□□□□ -0.36
UBXN4-204ENST00000426921 PHF5AQ7RTV0 110 aaKnown RBP12.78□□□□□ -0.36
UBXN4-204ENST00000426921 IGLV4-3A0A075B6K6 122 aa12.77□□□□□ -0.37
UBXN4-204ENST00000426921 TGIF2-C20orf24A0A0A6YYL0 155 aa12.77□□□□□ -0.37
UBXN4-204ENST00000426921 MT-ND6P03923 174 aa12.77□□□□□ -0.37
UBXN4-204ENST00000426921 KIAA0087Q14695 138 aa12.76□□□□□ -0.37
UBXN4-204ENST00000426921 LINC00242Q5T6M2 205 aa12.76□□□□□ -0.37
UBXN4-204ENST00000426921 C6orf48Q9UBA6 75 aa12.76□□□□□ -0.37
UBXN4-204ENST00000426921 PNRC1Q12796 327 aaPredicted RBP12.75□□□□□ -0.37
UBXN4-204ENST00000426921 UNQ6190/PRO20217Q6UXQ8 127 aa12.75□□□□□ -0.37
UBXN4-204ENST00000426921 TMEM141Q96I45 108 aa12.75□□□□□ -0.37
UBXN4-204ENST00000426921 C1orf137Q5JT78 98 aa12.73□□□□□ -0.37
UBXN4-204ENST00000426921 MAP1LC3AQ9H492 121 aa12.73□□□□□ -0.37
UBXN4-204ENST00000426921 UBE2D1P51668 147 aa12.72□□□□□ -0.37
UBXN4-204ENST00000426921 LINC01561Q8N1V8 128 aa12.72□□□□□ -0.37
UBXN4-204ENST00000426921 ANAPC16Q96DE5 110 aa12.72□□□□□ -0.37
UBXN4-204ENST00000426921 TRBV30A0A0K0K1B3 111 aa12.71□□□□□ -0.37
UBXN4-204ENST00000426921 FAM168BA1KXE4 195 aa12.71□□□□□ -0.37
UBXN4-204ENST00000426921 TEX43Q6ZNM6 134 aa12.71□□□□□ -0.37
UBXN4-204ENST00000426921 LOC389332A0A1B0GUA5 103 aa12.7□□□□□ -0.38
UBXN4-204ENST00000426921 MT-ND4LP03901 98 aa12.7□□□□□ -0.38
UBXN4-204ENST00000426921 NPSP0C0P6 89 aa12.7□□□□□ -0.38
UBXN4-204ENST00000426921 LINC00173Q6ZV60 143 aa12.7□□□□□ -0.38
UBXN4-204ENST00000426921 Q8N8P6 123 aa12.7□□□□□ -0.38
UBXN4-204ENST00000426921 CYSLTR1Q9Y271 337 aa12.7□□□□□ -0.38
UBXN4-204ENST00000426921 IGLV7-43P04211 117 aa12.69□□□□□ -0.38
UBXN4-204ENST00000426921 C2orf66Q6UXQ4 117 aa12.69□□□□□ -0.38
UBXN4-204ENST00000426921 KRTAP11-1Q8IUC1 163 aa12.69□□□□□ -0.38
UBXN4-204ENST00000426921 KRTAP7-1Q8IUC3 87 aa12.69□□□□□ -0.38
UBXN4-204ENST00000426921 AMELXQ99217 191 aa12.69□□□□□ -0.38
UBXN4-204ENST00000426921 C2orf88Q9BSF0 95 aa12.69□□□□□ -0.38
UBXN4-204ENST00000426921 K7EMI3 77 aa12.68□□□□□ -0.38
UBXN4-204ENST00000426921 NDUFC2-KCTD14E9PQ53 114 aa12.67□□□□□ -0.38
UBXN4-204ENST00000426921 GAGE2EQ4V326 116 aa12.67□□□□□ -0.38
UBXN4-204ENST00000426921 ORMDL2Q53FV1 153 aa12.67□□□□□ -0.38
UBXN4-204ENST00000426921 Q6ZN92 141 aa12.67□□□□□ -0.38
UBXN4-204ENST00000426921 FAM19A5Q7Z5A7 132 aaPredicted RBP12.67□□□□□ -0.38
UBXN4-204ENST00000426921 GAGE2DQ9UEU5 116 aa12.67□□□□□ -0.38
UBXN4-204ENST00000426921 RNF213Q63HN8 5207 aa12.66□□□□□ -0.38
UBXN4-204ENST00000426921 C2orf82Q6UX34 121 aa12.66□□□□□ -0.38
UBXN4-204ENST00000426921 FAM19A3Q7Z5A8 133 aa12.66□□□□□ -0.38
UBXN4-204ENST00000426921 DIRC1Q969H9 104 aa12.66□□□□□ -0.38
UBXN4-204ENST00000426921 IGIPA6NJ69 53 aa12.65□□□□□ -0.38
UBXN4-204ENST00000426921 ZC2HC1BQ5TFG8 222 aa12.64□□□□□ -0.39
UBXN4-204ENST00000426921 PACRGQ96M98 296 aaPredicted RBP12.64□□□□□ -0.39
UBXN4-204ENST00000426921 VCX2Q9H322 139 aa12.64□□□□□ -0.39
UBXN4-204ENST00000426921 H0Y9J4 135 aa12.63□□□□□ -0.39
UBXN4-204ENST00000426921 M0QXV9 152 aa12.63□□□□□ -0.39
UBXN4-204ENST00000426921 C9orf129Q5T035 196 aaKnown RBP12.63□□□□□ -0.39
UBXN4-204ENST00000426921 NXT2Q9NPJ8 142 aaKnown RBP12.63□□□□□ -0.39
UBXN4-204ENST00000426921 RAB14P61106 215 aa12.62□□□□□ -0.39
UBXN4-204ENST00000426921 Q8IZM0 81 aa12.61□□□□□ -0.39
UBXN4-204ENST00000426921 CTDSP1Q9GZU7 261 aa12.6□□□□□ -0.39
UBXN4-204ENST00000426921 PRSS2P07478 247 aa12.59□□□□□ -0.39
UBXN4-204ENST00000426921 PAPPA-AS1Q5QFB9 102 aa12.59□□□□□ -0.39
UBXN4-204ENST00000426921 PRR26Q8N8Z3 221 aa12.59□□□□□ -0.39
UBXN4-204ENST00000426921 TIMM17AQ99595 171 aa12.59□□□□□ -0.39
UBXN4-204ENST00000426921 G0S2P27469 103 aa12.58□□□□□ -0.4
UBXN4-204ENST00000426921 HERVK_113P63121 156 aa12.58□□□□□ -0.4
UBXN4-204ENST00000426921 UBE2BP63146 152 aa12.58□□□□□ -0.4
UBXN4-204ENST00000426921 SEC11AP67812 179 aa12.58□□□□□ -0.4
UBXN4-204ENST00000426921 KRTAP1-4P0C5Y4 121 aa12.57□□□□□ -0.4
UBXN4-204ENST00000426921 CKS1BP61024 79 aa12.57□□□□□ -0.4
UBXN4-204ENST00000426921 CLLU1Q5K131 121 aa12.57□□□□□ -0.4
UBXN4-204ENST00000426921 TOMM6Q96B49 74 aa12.57□□□□□ -0.4
UBXN4-204ENST00000426921 TOMM7Q9P0U1 55 aa12.56□□□□□ -0.4
UBXN4-204ENST00000426921 CDKN2A-AS1Q9UH64 79 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms