RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 IGIPA6NJ69 53 aa8.16□□□□□ -1.1
GPC1-204ENST00000426280 LINC00614P0C842 121 aa8.16□□□□□ -1.1
GPC1-204ENST00000426280 S100A1P23297 94 aa8.16□□□□□ -1.1
GPC1-204ENST00000426280 FOXI1Q12951 378 aa8.16□□□□□ -1.1
GPC1-204ENST00000426280 SS18Q15532 418 aa8.16□□□□□ -1.1
GPC1-204ENST00000426280 PMCHL1Q16048 86 aa8.16□□□□□ -1.1
GPC1-204ENST00000426280 TOMM6Q96B49 74 aa8.16□□□□□ -1.1
GPC1-204ENST00000426280 A0A096LNJ9 63 aa8.15□□□□□ -1.1
GPC1-204ENST00000426280 CHTF8P0CG12 524 aa8.15□□□□□ -1.1
GPC1-204ENST00000426280 HIGD2BQ4VC39 106 aa8.15□□□□□ -1.1
GPC1-204ENST00000426280 LINC00526Q96FQ7 95 aa8.15□□□□□ -1.1
GPC1-204ENST00000426280 TMEM141Q96I45 108 aa8.15□□□□□ -1.1
GPC1-204ENST00000426280 AP5S1Q9NUS5 200 aa8.15□□□□□ -1.1
GPC1-204ENST00000426280 IFITM10A6NMD0 228 aa8.14□□□□□ -1.11
GPC1-204ENST00000426280 CNBPP62633 177 aaKnown RBP8.14□□□□□ -1.11
GPC1-204ENST00000426280 LINC00173Q6ZV60 143 aa8.14□□□□□ -1.11
GPC1-204ENST00000426280 SCGB3A1Q96QR1 104 aa8.14□□□□□ -1.11
GPC1-204ENST00000426280 C1orf196B1AJZ1 125 aa8.13□□□□□ -1.11
GPC1-204ENST00000426280 G0S2P27469 103 aa8.13□□□□□ -1.11
GPC1-204ENST00000426280 MYCBP2O75592 4640 aa8.12□□□□□ -1.11
GPC1-204ENST00000426280 HNRNPA3P51991 378 aaKnown RBP8.12□□□□□ -1.11
GPC1-204ENST00000426280 RAB5BP61020 215 aa8.12□□□□□ -1.11
GPC1-204ENST00000426280 CD164L2Q6UWJ8 174 aa8.12□□□□□ -1.11
GPC1-204ENST00000426280 TEX43Q6ZNM6 134 aa8.12□□□□□ -1.11
GPC1-204ENST00000426280 ERASQ7Z444 233 aa8.12□□□□□ -1.11
GPC1-204ENST00000426280 BAGE3Q86Y29 109 aa8.12□□□□□ -1.11
GPC1-204ENST00000426280 AMELXQ99217 191 aa8.12□□□□□ -1.11
GPC1-204ENST00000426280 TIMM17AQ99595 171 aa8.12□□□□□ -1.11
GPC1-204ENST00000426280 VCX2Q9H322 139 aa8.12□□□□□ -1.11
GPC1-204ENST00000426280 HERC1Q15751 4861 aa8.12□□□□□ -1.11
GPC1-204ENST00000426280 FLG2Q5D862 2391 aaPredicted RBP8.11□□□□□ -1.11
GPC1-204ENST00000426280 HBDP02042 147 aa8.11□□□□□ -1.11
GPC1-204ENST00000426280 LINC00310P59036 64 aa8.11□□□□□ -1.11
GPC1-204ENST00000426280 COX6A2Q02221 97 aa8.11□□□□□ -1.11
GPC1-204ENST00000426280 Q6ZN92 141 aa8.11□□□□□ -1.11
GPC1-204ENST00000426280 C5orf38Q86SI9 138 aa8.11□□□□□ -1.11
GPC1-204ENST00000426280 NUPR1O60356 82 aa8.1□□□□□ -1.11
GPC1-204ENST00000426280 PLA2G1BP04054 148 aaKnown RBP8.1□□□□□ -1.11
GPC1-204ENST00000426280 UBE2D1P51668 147 aa8.1□□□□□ -1.11
GPC1-204ENST00000426280 CIRBPQ14011 172 aaKnown RBP8.1□□□□□ -1.11
GPC1-204ENST00000426280 LINC00242Q5T6M2 205 aa8.1□□□□□ -1.11
GPC1-204ENST00000426280 FAM19A2Q8N3H0 131 aa8.1□□□□□ -1.11
GPC1-204ENST00000426280 SERF1AO75920 110 aa8.09□□□□□ -1.11
GPC1-204ENST00000426280 NPSP0C0P6 89 aa8.09□□□□□ -1.11
GPC1-204ENST00000426280 PDZD11Q5EBL8 140 aa8.09□□□□□ -1.11
GPC1-204ENST00000426280 CHCHD1Q96BP2 118 aaKnown RBP8.09□□□□□ -1.11
GPC1-204ENST00000426280 C2orf88Q9BSF0 95 aa8.09□□□□□ -1.11
GPC1-204ENST00000426280 IGHV3-64A0A075B6Q5 118 aa8.08□□□□□ -1.12
GPC1-204ENST00000426280 A0A087WYN8 130 aa8.08□□□□□ -1.12
GPC1-204ENST00000426280 GVQW2A0A096LPI5 108 aaPredicted RBP8.08□□□□□ -1.12
GPC1-204ENST00000426280 IGHV3OR16-9A0A0B4J2B5 98 aa8.08□□□□□ -1.12
GPC1-204ENST00000426280 COX7A2LO14548 114 aa8.08□□□□□ -1.12
GPC1-204ENST00000426280 HIST1H2BKO60814 126 aa8.08□□□□□ -1.12
GPC1-204ENST00000426280 HSBP1O75506 76 aa8.08□□□□□ -1.12
GPC1-204ENST00000426280 HIST1H2BJP06899 126 aa8.08□□□□□ -1.12
GPC1-204ENST00000426280 HIST1H2BOP23527 126 aa8.08□□□□□ -1.12
GPC1-204ENST00000426280 HIST1H2BBP33778 126 aa8.08□□□□□ -1.12
GPC1-204ENST00000426280 HIST1H2BDP58876 126 aa8.08□□□□□ -1.12
GPC1-204ENST00000426280 HIST1H2BCP62807 126 aa8.08□□□□□ -1.12
GPC1-204ENST00000426280 HIST2H2BEQ16778 126 aa8.08□□□□□ -1.12
GPC1-204ENST00000426280 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.08□□□□□ -1.12
GPC1-204ENST00000426280 HIST1H2BHQ93079 126 aa8.08□□□□□ -1.12
GPC1-204ENST00000426280 HIST1H2BNQ99877 126 aa8.08□□□□□ -1.12
GPC1-204ENST00000426280 HIST1H2BMQ99879 126 aa8.08□□□□□ -1.12
GPC1-204ENST00000426280 IGHV1-58A0A0C4DH39 117 aa8.07□□□□□ -1.12
GPC1-204ENST00000426280 A0A0J9YXV3 536 aa8.07□□□□□ -1.12
GPC1-204ENST00000426280 LINC01549A6NIU2 74 aa8.07□□□□□ -1.12
GPC1-204ENST00000426280 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.07□□□□□ -1.12
GPC1-204ENST00000426280 MALP21145 153 aa8.07□□□□□ -1.12
GPC1-204ENST00000426280 PAPPA-AS1Q5QFB9 102 aa8.07□□□□□ -1.12
GPC1-204ENST00000426280 CFAP161Q6P656 301 aa8.07□□□□□ -1.12
GPC1-204ENST00000426280 NDUFA6P56556 154 aa8.06□□□□□ -1.12
GPC1-204ENST00000426280 PMVKQ15126 192 aa8.06□□□□□ -1.12
GPC1-204ENST00000426280 SPACA4Q8TDM5 124 aa8.06□□□□□ -1.12
GPC1-204ENST00000426280 CST9LQ9H4G1 147 aa8.06□□□□□ -1.12
GPC1-204ENST00000426280 LRP1Q07954 4544 aaKnown RBP8.05□□□□□ -1.12
GPC1-204ENST00000426280 RPL37AP61513 92 aaKnown RBP8.05□□□□□ -1.12
GPC1-204ENST00000426280 FAM19A3Q7Z5A8 133 aa8.05□□□□□ -1.12
GPC1-204ENST00000426280 A0A096LNI7 61 aa8.04□□□□□ -1.12
GPC1-204ENST00000426280 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.04□□□□□ -1.12
GPC1-204ENST00000426280 ATP5LO75964 103 aa8.04□□□□□ -1.12
GPC1-204ENST00000426280 DPH3Q96FX2 82 aa8.04□□□□□ -1.12
GPC1-204ENST00000426280 PKHD1L1Q86WI1 4243 aa8.04□□□□□ -1.12
GPC1-204ENST00000426280 IGLV4-69A0A075B6H9 119 aa8.03□□□□□ -1.12
GPC1-204ENST00000426280 A0A087WZ39 114 aa8.03□□□□□ -1.12
GPC1-204ENST00000426280 IGKV2-24A0A0C4DH68 120 aa8.03□□□□□ -1.12
GPC1-204ENST00000426280 ORAOV1Q8WV07 137 aa8.03□□□□□ -1.12
GPC1-204ENST00000426280 GEMIN7Q9H840 131 aaKnown RBP8.03□□□□□ -1.12
GPC1-204ENST00000426280 CDKN2A-AS1Q9UH64 79 aa8.03□□□□□ -1.12
GPC1-204ENST00000426280 KRTAP29-1A8MX34 341 aaPredicted RBP8.02□□□□□ -1.13
GPC1-204ENST00000426280 ZNF561-AS1K7EIQ3 104 aa8.02□□□□□ -1.13
GPC1-204ENST00000426280 APOMO95445 188 aa8.02□□□□□ -1.13
GPC1-204ENST00000426280 FABP4P15090 132 aa8.02□□□□□ -1.13
GPC1-204ENST00000426280 HERVK_113P63121 156 aa8.02□□□□□ -1.13
GPC1-204ENST00000426280 SPAG11BQ08648 103 aa8.02□□□□□ -1.13
GPC1-204ENST00000426280 MAJINQ3KP22 176 aa8.02□□□□□ -1.13
GPC1-204ENST00000426280 Q6ZRU5 148 aa8.02□□□□□ -1.13
GPC1-204ENST00000426280 IFI27L1Q96BM0 104 aa8.02□□□□□ -1.13
GPC1-204ENST00000426280 PLAC8Q9NZF1 115 aa8.02□□□□□ -1.13
GPC1-204ENST00000426280 FAT3Q8TDW7 4589 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms