RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 SERF1AO75920 110 aa15.97■□□□□ 0.15
VEGFA-209ENST00000425836 hDV102S1A0JD36 115 aa15.96■□□□□ 0.15
VEGFA-209ENST00000425836 HSBP1O75506 76 aa15.96■□□□□ 0.15
VEGFA-209ENST00000425836 HIST1H2BKO60814 126 aa15.96■□□□□ 0.14
VEGFA-209ENST00000425836 HIST1H2BJP06899 126 aa15.96■□□□□ 0.14
VEGFA-209ENST00000425836 HIST1H2BOP23527 126 aa15.96■□□□□ 0.14
VEGFA-209ENST00000425836 HIST1H2BBP33778 126 aa15.96■□□□□ 0.14
VEGFA-209ENST00000425836 HIST1H2BDP58876 126 aa15.96■□□□□ 0.14
VEGFA-209ENST00000425836 HIST1H2BCP62807 126 aa15.96■□□□□ 0.14
VEGFA-209ENST00000425836 COX6A2Q02221 97 aa15.96■□□□□ 0.14
VEGFA-209ENST00000425836 HIST2H2BEQ16778 126 aa15.96■□□□□ 0.14
VEGFA-209ENST00000425836 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.96■□□□□ 0.14
VEGFA-209ENST00000425836 HIST1H2BHQ93079 126 aa15.96■□□□□ 0.14
VEGFA-209ENST00000425836 HIST1H2BNQ99877 126 aa15.96■□□□□ 0.14
VEGFA-209ENST00000425836 HIST1H2BMQ99879 126 aa15.96■□□□□ 0.14
VEGFA-209ENST00000425836 IGHV1-58A0A0C4DH39 117 aa15.95■□□□□ 0.14
VEGFA-209ENST00000425836 MALP21145 153 aa15.95■□□□□ 0.14
VEGFA-209ENST00000425836 HIGD2BQ4VC39 106 aa15.95■□□□□ 0.14
VEGFA-209ENST00000425836 CST9LQ9H4G1 147 aa15.95■□□□□ 0.14
VEGFA-209ENST00000425836 GVQW2A0A096LPI5 108 aaPredicted RBP15.94■□□□□ 0.14
VEGFA-209ENST00000425836 NUPR1O60356 82 aa15.94■□□□□ 0.14
VEGFA-209ENST00000425836 GCSHP23434 173 aa15.94■□□□□ 0.14
VEGFA-209ENST00000425836 FAM19A3Q7Z5A8 133 aa15.94■□□□□ 0.14
VEGFA-209ENST00000425836 FAM19A2Q8N3H0 131 aa15.94■□□□□ 0.14
VEGFA-209ENST00000425836 ATP5LO75964 103 aa15.92■□□□□ 0.14
VEGFA-209ENST00000425836 KRTAP10-1P60331 282 aa15.92■□□□□ 0.14
VEGFA-209ENST00000425836 PMVKQ15126 192 aa15.92■□□□□ 0.14
VEGFA-209ENST00000425836 SLPIP03973 132 aa15.92■□□□□ 0.14
VEGFA-209ENST00000425836 A0A0J9YXV3 536 aa15.91■□□□□ 0.14
VEGFA-209ENST00000425836 CNBPP62633 177 aaKnown RBP15.9■□□□□ 0.14
VEGFA-209ENST00000425836 SEC11AP67812 179 aa15.9■□□□□ 0.14
VEGFA-209ENST00000425836 A0A087WZ39 114 aa15.89■□□□□ 0.13
VEGFA-209ENST00000425836 LINC01620Q4KN68 170 aa15.89■□□□□ 0.13
VEGFA-209ENST00000425836 APOMO95445 188 aa15.87■□□□□ 0.13
VEGFA-209ENST00000425836 NDUFA6P56556 154 aa15.87■□□□□ 0.13
VEGFA-209ENST00000425836 LINC00526Q96FQ7 95 aa15.87■□□□□ 0.13
VEGFA-209ENST00000425836 HERVK_113P63121 156 aa15.87■□□□□ 0.13
VEGFA-209ENST00000425836 GEMIN7Q9H840 131 aaKnown RBP15.87■□□□□ 0.13
VEGFA-209ENST00000425836 IGHV3-64A0A075B6Q5 118 aa15.86■□□□□ 0.13
VEGFA-209ENST00000425836 IFI27L1Q96BM0 104 aa15.86■□□□□ 0.13
VEGFA-209ENST00000425836 TINCRA0A1B0GVN0 87 aa15.85■□□□□ 0.13
VEGFA-209ENST00000425836 ZNF561-AS1K7EIQ3 104 aa15.85■□□□□ 0.13
VEGFA-209ENST00000425836 C9orf163Q8N9P6 203 aa15.85■□□□□ 0.13
VEGFA-209ENST00000425836 LINC01561Q8N1V8 128 aa15.84■□□□□ 0.13
VEGFA-209ENST00000425836 CDKN2A-AS1Q9UH64 79 aa15.84■□□□□ 0.13
VEGFA-209ENST00000425836 IGLV4-69A0A075B6H9 119 aa15.83■□□□□ 0.13
VEGFA-209ENST00000425836 OR10D4PQ8NGN7 298 aa15.83■□□□□ 0.13
VEGFA-209ENST00000425836 ORAOV1Q8WV07 137 aa15.83■□□□□ 0.13
VEGFA-209ENST00000425836 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.83■□□□□ 0.12
VEGFA-209ENST00000425836 LEPROTL1O95214 131 aa15.83■□□□□ 0.12
VEGFA-209ENST00000425836 SPAG11BQ08648 103 aa15.82■□□□□ 0.12
VEGFA-209ENST00000425836 IGLV5-45A0A087WSX0 123 aa15.81■□□□□ 0.12
VEGFA-209ENST00000425836 IGLC3P0DOY3 106 aa15.81■□□□□ 0.12
VEGFA-209ENST00000425836 LINC00469Q8N7U9 141 aa15.81■□□□□ 0.12
VEGFA-209ENST00000425836 APOBP04114 4563 aaKnown RBP15.8■□□□□ 0.12
VEGFA-209ENST00000425836 DNAH8Q96JB1 4490 aa15.79■□□□□ 0.12
VEGFA-209ENST00000425836 COA6Q5JTJ3 125 aaKnown RBP15.79■□□□□ 0.12
VEGFA-209ENST00000425836 KIAA1109Q2LD37 5005 aa15.79■□□□□ 0.12
VEGFA-209ENST00000425836 TRAV12-1A0A0B4J245 112 aa15.79■□□□□ 0.12
VEGFA-209ENST00000425836 FABP4P15090 132 aa15.79■□□□□ 0.12
VEGFA-209ENST00000425836 C2orf48Q96LS8 159 aa15.79■□□□□ 0.12
VEGFA-209ENST00000425836 FAM30AQ9NZY2 134 aa15.79■□□□□ 0.12
VEGFA-209ENST00000425836 HSPB8Q9UJY1 196 aa15.79■□□□□ 0.12
VEGFA-209ENST00000425836 SYCNQ0VAF6 134 aa15.78■□□□□ 0.12
VEGFA-209ENST00000425836 CHAC1Q9BUX1 264 aa15.78■□□□□ 0.12
VEGFA-209ENST00000425836 KIAA0087Q14695 138 aa15.77■□□□□ 0.11
VEGFA-209ENST00000425836 SDIM1Q6ZPB5 146 aa15.77■□□□□ 0.11
VEGFA-209ENST00000425836 CHTOPQ9Y3Y2 248 aaKnown RBP15.77■□□□□ 0.11
VEGFA-209ENST00000425836 CDK2AP2O75956 126 aa15.76■□□□□ 0.11
VEGFA-209ENST00000425836 CARD19Q96LW7 228 aa15.76■□□□□ 0.11
VEGFA-209ENST00000425836 PACRGQ96M98 296 aaPredicted RBP15.76■□□□□ 0.11
VEGFA-209ENST00000425836 CAMK2N2Q96S95 79 aa15.76■□□□□ 0.11
VEGFA-209ENST00000425836 Q6ZRU5 148 aa15.75■□□□□ 0.11
VEGFA-209ENST00000425836 Q6ZSA8 131 aa15.75■□□□□ 0.11
VEGFA-209ENST00000425836 C11orf86A6NJI1 115 aa15.74■□□□□ 0.11
VEGFA-209ENST00000425836 SMIM1B2RUZ4 78 aa15.74■□□□□ 0.11
VEGFA-209ENST00000425836 F8WDY8 70 aa15.73■□□□□ 0.11
VEGFA-209ENST00000425836 ZNF22P17026 224 aaPredicted RBP15.73■□□□□ 0.11
VEGFA-209ENST00000425836 XGP55808 180 aa15.73■□□□□ 0.11
VEGFA-209ENST00000425836 H0Y8G0 127 aa15.72■□□□□ 0.11
VEGFA-209ENST00000425836 MRPL35Q9NZE8 188 aaKnown RBP15.72■□□□□ 0.11
VEGFA-209ENST00000425836 RYR1P21817 5038 aa15.72■□□□□ 0.11
VEGFA-209ENST00000425836 H3BRM9 83 aa15.71■□□□□ 0.11
VEGFA-209ENST00000425836 SPINK8P0C7L1 97 aa15.71■□□□□ 0.11
VEGFA-209ENST00000425836 TOMM7Q9P0U1 55 aa15.71■□□□□ 0.11
VEGFA-209ENST00000425836 F8VRH5 84 aa15.7■□□□□ 0.1
VEGFA-209ENST00000425836 ODF1Q14990 250 aa15.7■□□□□ 0.1
VEGFA-209ENST00000425836 PRSS2P07478 247 aa15.7■□□□□ 0.1
VEGFA-209ENST00000425836 C10orf25Q5T742 122 aa15.7■□□□□ 0.1
VEGFA-209ENST00000425836 UNQ6190/PRO20217Q6UXQ8 127 aa15.7■□□□□ 0.1
VEGFA-209ENST00000425836 Q8IZM0 81 aa15.7■□□□□ 0.1
VEGFA-209ENST00000425836 NDUFA1O15239 70 aa15.69■□□□□ 0.1
VEGFA-209ENST00000425836 HSPG2P98160 4391 aa15.68■□□□□ 0.1
VEGFA-209ENST00000425836 HAMPP81172 84 aa15.68■□□□□ 0.1
VEGFA-209ENST00000425836 C6orf226Q5I0X4 101 aa15.68■□□□□ 0.1
VEGFA-209ENST00000425836 C2orf82Q6UX34 121 aa15.68■□□□□ 0.1
VEGFA-209ENST00000425836 RNF151Q2KHN1 245 aa15.67■□□□□ 0.1
VEGFA-209ENST00000425836 TMEM170BQ5T4T1 132 aa15.67■□□□□ 0.1
VEGFA-209ENST00000425836 MAP1LC3CQ9BXW4 147 aa15.67■□□□□ 0.1
VEGFA-209ENST00000425836 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms