RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 HIGD2BQ4VC39 106 aa2.61□□□□□ -1.99
TOP2A-201ENST00000423485 SPAG11AQ6PDA7 123 aa2.61□□□□□ -1.99
TOP2A-201ENST00000423485 PCLOQ9Y6V0 5065 aa2.61□□□□□ -1.99
TOP2A-201ENST00000423485 C9orf118A6NHY6 69 aa2.61□□□□□ -1.99
TOP2A-201ENST00000423485 SNRPCP09234 159 aaKnown RBP2.61□□□□□ -1.99
TOP2A-201ENST00000423485 EIF4EBP1Q13541 118 aaPredicted RBP2.61□□□□□ -1.99
TOP2A-201ENST00000423485 UTF1Q5T230 341 aa2.61□□□□□ -1.99
TOP2A-201ENST00000423485 LINC01590Q5TEZ4 76 aa2.61□□□□□ -1.99
TOP2A-201ENST00000423485 IGFBPL1Q8WX77 278 aa2.61□□□□□ -1.99
TOP2A-201ENST00000423485 ZNF492Q9P255 531 aa2.61□□□□□ -1.99
TOP2A-201ENST00000423485 ZNF580Q9UK33 172 aa2.61□□□□□ -1.99
TOP2A-201ENST00000423485 FAM24BQ8N5W8 94 aa2.61□□□□□ -1.99
TOP2A-201ENST00000423485 HSPB9Q9BQS6 159 aa2.61□□□□□ -1.99
TOP2A-201ENST00000423485 IGLV4-69A0A075B6H9 119 aa2.61□□□□□ -1.99
TOP2A-201ENST00000423485 P0C879 139 aa2.61□□□□□ -1.99
TOP2A-201ENST00000423485 SEC61GP60059 68 aa2.61□□□□□ -1.99
TOP2A-201ENST00000423485 C2orf48Q96LS8 159 aa2.61□□□□□ -1.99
TOP2A-201ENST00000423485 ACYP1P07311 99 aa2.61□□□□□ -1.99
TOP2A-201ENST00000423485 REG3AQ06141 175 aa2.61□□□□□ -1.99
TOP2A-201ENST00000423485 CASC2Q6XLA1 102 aa2.61□□□□□ -1.99
TOP2A-201ENST00000423485 RBM12B-AS1Q9P1G2 102 aa2.61□□□□□ -1.99
TOP2A-201ENST00000423485 HSPB8Q9UJY1 196 aa2.61□□□□□ -1.99
TOP2A-201ENST00000423485 IGKV1D-37A0A075B6S9 117 aa2.6□□□□□ -1.99
TOP2A-201ENST00000423485 I3L3M4 83 aa2.6□□□□□ -1.99
TOP2A-201ENST00000423485 LYPD1Q8N2G4 141 aa2.6□□□□□ -1.99
TOP2A-201ENST00000423485 A0A1W2PP11 408 aa2.6□□□□□ -1.99
TOP2A-201ENST00000423485 IGLV1-47P01700 117 aa2.6□□□□□ -1.99
TOP2A-201ENST00000423485 TCRAP04437 139 aa2.6□□□□□ -1.99
TOP2A-201ENST00000423485 PSMB8P28062 276 aa2.6□□□□□ -1.99
TOP2A-201ENST00000423485 C10orf55Q5SWW7 151 aa2.6□□□□□ -1.99
TOP2A-201ENST00000423485 PSORS1C2Q9UIG4 136 aa2.6□□□□□ -1.99
TOP2A-201ENST00000423485 ERG28Q9UKR5 140 aa2.6□□□□□ -1.99
TOP2A-201ENST00000423485 KRTDAPP60985 99 aa2.6□□□□□ -1.99
TOP2A-201ENST00000423485 MEF2BQ02080 365 aaPredicted RBP2.6□□□□□ -1.99
TOP2A-201ENST00000423485 PDE6HQ13956 83 aa2.6□□□□□ -1.99
TOP2A-201ENST00000423485 DEFB105AQ8NG35 78 aa2.6□□□□□ -1.99
TOP2A-201ENST00000423485 EPDR1Q9UM22 224 aa2.6□□□□□ -1.99
TOP2A-201ENST00000423485 F8WDY8 70 aa2.6□□□□□ -1.99
TOP2A-201ENST00000423485 TRBV12-3P01733 135 aa2.6□□□□□ -1.99
TOP2A-201ENST00000423485 IGKV1D-8A0A087WSZ0 117 aa2.59□□□□□ -1.99
TOP2A-201ENST00000423485 LINC00315P59091 139 aa2.59□□□□□ -1.99
TOP2A-201ENST00000423485 OR5C1Q8NGR4 320 aa2.59□□□□□ -1.99
TOP2A-201ENST00000423485 LEPROTO15243 131 aa2.59□□□□□ -1.99
TOP2A-201ENST00000423485 ORMDL2Q53FV1 153 aa2.59□□□□□ -1.99
TOP2A-201ENST00000423485 Q6ZRM9 215 aa2.59□□□□□ -1.99
TOP2A-201ENST00000423485 C19orf71A6NCJ1 209 aa2.59□□□□□ -1.99
TOP2A-201ENST00000423485 PGPEP1LA6NFU8 196 aa2.59□□□□□ -1.99
TOP2A-201ENST00000423485 ZNF705FA8MVS1 300 aaPredicted RBP2.59□□□□□ -1.99
TOP2A-201ENST00000423485 ZNF705DP0CH99 300 aaPredicted RBP2.59□□□□□ -1.99
TOP2A-201ENST00000423485 NMSQ5H8A3 153 aa2.59□□□□□ -1.99
TOP2A-201ENST00000423485 MIC13Q5XKP0 118 aa2.59□□□□□ -1.99
TOP2A-201ENST00000423485 SMIM7Q9BQ49 75 aa2.59□□□□□ -2
TOP2A-201ENST00000423485 LSM4Q9Y4Z0 139 aaKnown RBP2.59□□□□□ -2
TOP2A-201ENST00000423485 IGKV2-40A0A087WW87 121 aaPredicted RBP2.59□□□□□ -2
TOP2A-201ENST00000423485 IGKV2D-40P01614 121 aaPredicted RBP2.59□□□□□ -2
TOP2A-201ENST00000423485 CRYBA4P53673 196 aa2.59□□□□□ -2
TOP2A-201ENST00000423485 TRAPPC1Q9Y5R8 145 aa2.59□□□□□ -2
TOP2A-201ENST00000423485 CHKB-CPT1BH3BT56 60 aa2.58□□□□□ -2
TOP2A-201ENST00000423485 DCANP1Q8TF63 244 aa2.58□□□□□ -2
TOP2A-201ENST00000423485 DKK2Q9UBU2 259 aa2.58□□□□□ -2
TOP2A-201ENST00000423485 KIAA1109Q2LD37 5005 aa2.58□□□□□ -2
TOP2A-201ENST00000423485 TRBV10-1A0A0K0K1A3 114 aa2.58□□□□□ -2
TOP2A-201ENST00000423485 MYMXA0A1B0GTQ4 84 aa2.58□□□□□ -2
TOP2A-201ENST00000423485 GAGE10A6NGK3 116 aa2.58□□□□□ -2
TOP2A-201ENST00000423485 PMS2P5A8MQ11 134 aa2.58□□□□□ -2
TOP2A-201ENST00000423485 H0YIZ8 118 aa2.58□□□□□ -2
TOP2A-201ENST00000423485 CXCL1P09341 107 aa2.58□□□□□ -2
TOP2A-201ENST00000423485 COX8AP10176 69 aa2.58□□□□□ -2
TOP2A-201ENST00000423485 FOXI1Q12951 378 aa2.58□□□□□ -2
TOP2A-201ENST00000423485 EBI3Q14213 229 aa2.58□□□□□ -2
TOP2A-201ENST00000423485 PTH2Q96A98 100 aa2.58□□□□□ -2
TOP2A-201ENST00000423485 IGLV11-55A0A075B6I3 123 aa2.58□□□□□ -2
TOP2A-201ENST00000423485 PFN2P35080 140 aa2.58□□□□□ -2
TOP2A-201ENST00000423485 ATP5EP56381 51 aaPredicted RBP2.58□□□□□ -2
TOP2A-201ENST00000423485 SPATA45Q537H7 98 aa2.58□□□□□ -2
TOP2A-201ENST00000423485 SPINK6Q6UWN8 80 aa2.58□□□□□ -2
TOP2A-201ENST00000423485 TRBV7-3A0A075B6L6 115 aa2.58□□□□□ -2
TOP2A-201ENST00000423485 H7C2G1 150 aa2.58□□□□□ -2
TOP2A-201ENST00000423485 HSBP1O75506 76 aa2.58□□□□□ -2
TOP2A-201ENST00000423485 RPL23P62829 140 aaKnown RBP2.58□□□□□ -2
TOP2A-201ENST00000423485 HERVK_113P63121 156 aa2.58□□□□□ -2
TOP2A-201ENST00000423485 LAGE3Q14657 143 aa2.58□□□□□ -2
TOP2A-201ENST00000423485 C17orf58Q2M2W7 97 aa2.58□□□□□ -2
TOP2A-201ENST00000423485 RNASE8Q8TDE3 154 aaKnown RBP2.58□□□□□ -2
TOP2A-201ENST00000423485 IZUMO1RA6ND01 250 aa2.57□□□□□ -2
TOP2A-201ENST00000423485 FABP2P12104 132 aa2.57□□□□□ -2
TOP2A-201ENST00000423485 LINC00574Q9H8X3 128 aa2.57□□□□□ -2
TOP2A-201ENST00000423485 NUPR1O60356 82 aa2.57□□□□□ -2
TOP2A-201ENST00000423485 Q6ZSA8 131 aa2.57□□□□□ -2
TOP2A-201ENST00000423485 IGLV9-49A0A0B4J1Y8 123 aa2.57□□□□□ -2
TOP2A-201ENST00000423485 SMIM27A0A1W2PRY6 76 aa2.57□□□□□ -2
TOP2A-201ENST00000423485 TAX1BP3O14907 124 aa2.57□□□□□ -2
TOP2A-201ENST00000423485 CHTF8P0CG12 524 aa2.57□□□□□ -2
TOP2A-201ENST00000423485 FUSP35637 526 aaKnown RBP eCLIP2.57□□□□□ -2
TOP2A-201ENST00000423485 MRPS36P82909 103 aaKnown RBP2.57□□□□□ -2
TOP2A-201ENST00000423485 BVES-AS1Q5T3Y7 98 aa2.57□□□□□ -2
TOP2A-201ENST00000423485 NUP35Q8NFH5 326 aa2.57□□□□□ -2
TOP2A-201ENST00000423485 USP17L23D6RBM5 183 aa2.57□□□□□ -2
TOP2A-201ENST00000423485 ZNF705BP0CI00 300 aaPredicted RBP2.57□□□□□ -2
TOP2A-201ENST00000423485 FOXA3P55318 350 aaPredicted RBP2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms