RNA–Protein interactions for RNA: ENST00000423251.1

MCF2L-214, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-214ENST00000423251 COX7A2LO14548 114 aa12.2□□□□□ -0.46
MCF2L-214ENST00000423251 LINC00173Q6ZV60 143 aa12.2□□□□□ -0.46
MCF2L-214ENST00000423251 CHCHD1Q96BP2 118 aaKnown RBP12.2□□□□□ -0.46
MCF2L-214ENST00000423251 IGHV3OR16-9A0A0B4J2B5 98 aa12.19□□□□□ -0.46
MCF2L-214ENST00000423251 UBE2D1P51668 147 aa12.19□□□□□ -0.46
MCF2L-214ENST00000423251 KRTAP10-1P60331 282 aa12.19□□□□□ -0.46
MCF2L-214ENST00000423251 A0A096LNJ9 63 aa12.18□□□□□ -0.46
MCF2L-214ENST00000423251 GVQW2A0A096LPI5 108 aaPredicted RBP12.18□□□□□ -0.46
MCF2L-214ENST00000423251 HBDP02042 147 aa12.18□□□□□ -0.46
MCF2L-214ENST00000423251 CNBPP62633 177 aaKnown RBP12.18□□□□□ -0.46
MCF2L-214ENST00000423251 LINC00242Q5T6M2 205 aa12.18□□□□□ -0.46
MCF2L-214ENST00000423251 ZC2HC1BQ5TFG8 222 aa12.18□□□□□ -0.46
MCF2L-214ENST00000423251 MALP21145 153 aa12.17□□□□□ -0.46
MCF2L-214ENST00000423251 C5orf38Q86SI9 138 aa12.17□□□□□ -0.46
MCF2L-214ENST00000423251 BAGE3Q86Y29 109 aa12.17□□□□□ -0.46
MCF2L-214ENST00000423251 HERC1Q15751 4861 aa12.16□□□□□ -0.46
MCF2L-214ENST00000423251 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.16□□□□□ -0.46
MCF2L-214ENST00000423251 FAM19A3Q7Z5A8 133 aa12.16□□□□□ -0.46
MCF2L-214ENST00000423251 FAT1Q14517 4588 aa12.16□□□□□ -0.46
MCF2L-214ENST00000423251 APOMO95445 188 aa12.15□□□□□ -0.46
MCF2L-214ENST00000423251 SLPIP03973 132 aa12.15□□□□□ -0.46
MCF2L-214ENST00000423251 SEC11AP67812 179 aa12.15□□□□□ -0.46
MCF2L-214ENST00000423251 PMCHL1Q16048 86 aa12.15□□□□□ -0.46
MCF2L-214ENST00000423251 HIGD2BQ4VC39 106 aa12.15□□□□□ -0.46
MCF2L-214ENST00000423251 PDZD11Q5EBL8 140 aa12.15□□□□□ -0.46
MCF2L-214ENST00000423251 C9orf163Q8N9P6 203 aa12.15□□□□□ -0.46
MCF2L-214ENST00000423251 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.14□□□□□ -0.47
MCF2L-214ENST00000423251 COX6A2Q02221 97 aa12.14□□□□□ -0.47
MCF2L-214ENST00000423251 CST9LQ9H4G1 147 aa12.14□□□□□ -0.47
MCF2L-214ENST00000423251 A0A087WZ39 114 aa12.13□□□□□ -0.47
MCF2L-214ENST00000423251 EPM2AB3EWF7 344 aa12.13□□□□□ -0.47
MCF2L-214ENST00000423251 ATP5LO75964 103 aa12.13□□□□□ -0.47
MCF2L-214ENST00000423251 PMVKQ15126 192 aa12.13□□□□□ -0.47
MCF2L-214ENST00000423251 ZNF561-AS1K7EIQ3 104 aa12.12□□□□□ -0.47
MCF2L-214ENST00000423251 HSBP1O75506 76 aa12.12□□□□□ -0.47
MCF2L-214ENST00000423251 LINC01620Q4KN68 170 aa12.12□□□□□ -0.47
MCF2L-214ENST00000423251 LINC01561Q8N1V8 128 aa12.12□□□□□ -0.47
MCF2L-214ENST00000423251 IGHV3-64A0A075B6Q5 118 aa12.11□□□□□ -0.47
MCF2L-214ENST00000423251 HERVK_113P63121 156 aa12.11□□□□□ -0.47
MCF2L-214ENST00000423251 OR10D4PQ8NGN7 298 aa12.1□□□□□ -0.47
MCF2L-214ENST00000423251 A0A0J9YXV3 536 aa12.09□□□□□ -0.47
MCF2L-214ENST00000423251 SERF1AO75920 110 aa12.09□□□□□ -0.47
MCF2L-214ENST00000423251 GEMIN7Q9H840 131 aaKnown RBP12.09□□□□□ -0.47
MCF2L-214ENST00000423251 IGLV4-69A0A075B6H9 119 aa12.08□□□□□ -0.48
MCF2L-214ENST00000423251 TINCRA0A1B0GVN0 87 aa12.08□□□□□ -0.48
MCF2L-214ENST00000423251 XGP55808 180 aa12.08□□□□□ -0.48
MCF2L-214ENST00000423251 LINC00310P59036 64 aa12.08□□□□□ -0.48
MCF2L-214ENST00000423251 SDIM1Q6ZPB5 146 aa12.08□□□□□ -0.48
MCF2L-214ENST00000423251 Q6ZSA8 131 aa12.08□□□□□ -0.48
MCF2L-214ENST00000423251 LINC00526Q96FQ7 95 aa12.08□□□□□ -0.48
MCF2L-214ENST00000423251 C2orf48Q96LS8 159 aa12.08□□□□□ -0.48
MCF2L-214ENST00000423251 FAM30AQ9NZY2 134 aa12.08□□□□□ -0.48
MCF2L-214ENST00000423251 F8WDY8 70 aa12.07□□□□□ -0.48
MCF2L-214ENST00000423251 HIST1H2BKO60814 126 aa12.07□□□□□ -0.48
MCF2L-214ENST00000423251 HIST1H2BJP06899 126 aa12.07□□□□□ -0.48
MCF2L-214ENST00000423251 HIST1H2BOP23527 126 aa12.07□□□□□ -0.48
MCF2L-214ENST00000423251 HIST1H2BBP33778 126 aa12.07□□□□□ -0.48
MCF2L-214ENST00000423251 HIST1H2BDP58876 126 aa12.07□□□□□ -0.48
MCF2L-214ENST00000423251 HIST1H2BCP62807 126 aa12.07□□□□□ -0.48
MCF2L-214ENST00000423251 HIST2H2BEQ16778 126 aa12.07□□□□□ -0.48
MCF2L-214ENST00000423251 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.07□□□□□ -0.48
MCF2L-214ENST00000423251 FAM19A2Q8N3H0 131 aa12.07□□□□□ -0.48
MCF2L-214ENST00000423251 ORAOV1Q8WV07 137 aa12.07□□□□□ -0.48
MCF2L-214ENST00000423251 HIST1H2BHQ93079 126 aa12.07□□□□□ -0.48
MCF2L-214ENST00000423251 HIST1H2BNQ99877 126 aa12.07□□□□□ -0.48
MCF2L-214ENST00000423251 HIST1H2BMQ99879 126 aa12.07□□□□□ -0.48
MCF2L-214ENST00000423251 NDUFA6P56556 154 aa12.06□□□□□ -0.48
MCF2L-214ENST00000423251 SPAG11BQ08648 103 aa12.06□□□□□ -0.48
MCF2L-214ENST00000423251 SYCNQ0VAF6 134 aa12.06□□□□□ -0.48
MCF2L-214ENST00000423251 CDKN2A-AS1Q9UH64 79 aa12.06□□□□□ -0.48
MCF2L-214ENST00000423251 INAFM2P0DMQ5 153 aa12.05□□□□□ -0.48
MCF2L-214ENST00000423251 Q5VSD8 79 aa12.05□□□□□ -0.48
MCF2L-214ENST00000423251 IFI27L1Q96BM0 104 aa12.05□□□□□ -0.48
MCF2L-214ENST00000423251 IGLV5-45A0A087WSX0 123 aa12.04□□□□□ -0.48
MCF2L-214ENST00000423251 NUPR1O60356 82 aa12.04□□□□□ -0.48
MCF2L-214ENST00000423251 S100A6P06703 90 aa12.04□□□□□ -0.48
MCF2L-214ENST00000423251 CARD19Q96LW7 228 aa12.04□□□□□ -0.48
MCF2L-214ENST00000423251 CAMK2N2Q96S95 79 aa12.04□□□□□ -0.48
MCF2L-214ENST00000423251 IGLC3P0DOY3 106 aa12.03□□□□□ -0.48
MCF2L-214ENST00000423251 LINC00469Q8N7U9 141 aa12.03□□□□□ -0.48
MCF2L-214ENST00000423251 DMBT1Q9UGM3 2413 aaPredicted RBP12.02□□□□□ -0.48
MCF2L-214ENST00000423251 VPS13BQ7Z7G8 4022 aa12.02□□□□□ -0.49
MCF2L-214ENST00000423251 KIAA0087Q14695 138 aa12.02□□□□□ -0.49
MCF2L-214ENST00000423251 TRAV12-1A0A0B4J245 112 aa12.01□□□□□ -0.49
MCF2L-214ENST00000423251 LEPROTL1O95214 131 aa12.01□□□□□ -0.49
MCF2L-214ENST00000423251 Q6ZRU5 148 aa12.01□□□□□ -0.49
MCF2L-214ENST00000423251 PACRGQ96M98 296 aaPredicted RBP12.01□□□□□ -0.49
MCF2L-214ENST00000423251 PKIGQ9Y2B9 76 aa12.01□□□□□ -0.49
MCF2L-214ENST00000423251 MYCBP2O75592 4640 aa12□□□□□ -0.49
MCF2L-214ENST00000423251 HAMPP81172 84 aa12□□□□□ -0.49
MCF2L-214ENST00000423251 RNF151Q2KHN1 245 aa12□□□□□ -0.49
MCF2L-214ENST00000423251 CHAC1Q9BUX1 264 aa12□□□□□ -0.49
MCF2L-214ENST00000423251 DNAH8Q96JB1 4490 aa11.99□□□□□ -0.49
MCF2L-214ENST00000423251 NDUFA1O15239 70 aa11.99□□□□□ -0.49
MCF2L-214ENST00000423251 MRPL35Q9NZE8 188 aaKnown RBP11.99□□□□□ -0.49
MCF2L-214ENST00000423251 HSPB8Q9UJY1 196 aa11.99□□□□□ -0.49
MCF2L-214ENST00000423251 CHTOPQ9Y3Y2 248 aaKnown RBP11.99□□□□□ -0.49
MCF2L-214ENST00000423251 H3BRM9 83 aa11.98□□□□□ -0.49
MCF2L-214ENST00000423251 SMR3BP02814 79 aaPredicted RBP11.98□□□□□ -0.49
MCF2L-214ENST00000423251 PRSS2P07478 247 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms