RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 SFT2D2O95562 160 aa-0.3□□□□□ -2.46
LINC00397-201ENST00000422074 AKAIN1P0CW23 69 aa-0.3□□□□□ -2.46
LINC00397-201ENST00000422074 SPRR2BP35325 72 aa-0.3□□□□□ -2.46
LINC00397-201ENST00000422074 C5orf38Q86SI9 138 aa-0.3□□□□□ -2.46
LINC00397-201ENST00000422074 FAIMQ9NVQ4 179 aa-0.3□□□□□ -2.46
LINC00397-201ENST00000422074 UQCR10Q9UDW1 63 aa-0.3□□□□□ -2.46
LINC00397-201ENST00000422074 ARHGEF12Q9NZN5 1544 aa-0.3□□□□□ -2.46
LINC00397-201ENST00000422074 MYOM1P52179 1685 aa-0.3□□□□□ -2.46
LINC00397-201ENST00000422074 SETD2Q9BYW2 2564 aaPredicted RBP-0.31□□□□□ -2.46
LINC00397-201ENST00000422074 K7EP13 123 aa-0.31□□□□□ -2.46
LINC00397-201ENST00000422074 MGPP08493 103 aa-0.31□□□□□ -2.46
LINC00397-201ENST00000422074 KRTAP19-8Q3LI54 63 aa-0.31□□□□□ -2.46
LINC00397-201ENST00000422074 FXYD6Q9H0Q3 95 aa-0.31□□□□□ -2.46
LINC00397-201ENST00000422074 SHROOM2Q13796 1616 aa-0.31□□□□□ -2.46
LINC00397-201ENST00000422074 PSME4Q14997 1843 aa-0.31□□□□□ -2.46
LINC00397-201ENST00000422074 TCHHQ07283 1943 aa-0.32□□□□□ -2.46
LINC00397-201ENST00000422074 PRKDCP78527 4128 aaKnown RBP-0.32□□□□□ -2.46
LINC00397-201ENST00000422074 KDM5AP29375 1690 aaKnown RBP-0.32□□□□□ -2.46
LINC00397-201ENST00000422074 COX6B1P14854 86 aa-0.32□□□□□ -2.46
LINC00397-201ENST00000422074 MRPL54Q6P161 138 aaKnown RBP-0.32□□□□□ -2.46
LINC00397-201ENST00000422074 MXRA5Q9NR99 2828 aa-0.32□□□□□ -2.46
LINC00397-201ENST00000422074 CUL7Q14999 1698 aa-0.33□□□□□ -2.46
LINC00397-201ENST00000422074 QRICH2Q9H0J4 1663 aa-0.33□□□□□ -2.46
LINC00397-201ENST00000422074 POLA1P09884 1462 aaPredicted RBP-0.33□□□□□ -2.46
LINC00397-201ENST00000422074 PCNX1Q96RV3 2341 aa-0.33□□□□□ -2.46
LINC00397-201ENST00000422074 LOC100130705A0A1B0GUX0 176 aa-0.33□□□□□ -2.46
LINC00397-201ENST00000422074 CHKB-CPT1BH3BT56 60 aa-0.33□□□□□ -2.46
LINC00397-201ENST00000422074 SPINK4O60575 86 aa-0.33□□□□□ -2.46
LINC00397-201ENST00000422074 KRTAP20-2Q3LI61 65 aa-0.33□□□□□ -2.46
LINC00397-201ENST00000422074 C9orf153Q5TBE3 101 aa-0.33□□□□□ -2.46
LINC00397-201ENST00000422074 ROBO1Q9Y6N7 1651 aa-0.33□□□□□ -2.46
LINC00397-201ENST00000422074 UBE2L5PA0A1B0GUS4 154 aa-0.34□□□□□ -2.46
LINC00397-201ENST00000422074 SNAPC5O75971 98 aa-0.34□□□□□ -2.46
LINC00397-201ENST00000422074 UBE2L3P68036 154 aaKnown RBP-0.34□□□□□ -2.46
LINC00397-201ENST00000422074 PP6455Q8WZ26 134 aa-0.34□□□□□ -2.46
LINC00397-201ENST00000422074 EPG5Q9HCE0 2579 aa-0.34□□□□□ -2.46
LINC00397-201ENST00000422074 HERC1Q15751 4861 aa-0.34□□□□□ -2.46
LINC00397-201ENST00000422074 A2ML1A8K2U0 1454 aa-0.35□□□□□ -2.46
LINC00397-201ENST00000422074 BTAF1O14981 1849 aa-0.35□□□□□ -2.47
LINC00397-201ENST00000422074 SPRR1BP22528 89 aa-0.35□□□□□ -2.47
LINC00397-201ENST00000422074 ATP5EP56381 51 aaPredicted RBP-0.35□□□□□ -2.47
LINC00397-201ENST00000422074 UBA52P62987 128 aaKnown RBP-0.35□□□□□ -2.47
LINC00397-201ENST00000422074 WHAMMP3Q1A5X7 153 aa-0.35□□□□□ -2.47
LINC00397-201ENST00000422074 NXT2Q9NPJ8 142 aaKnown RBP-0.35□□□□□ -2.47
LINC00397-201ENST00000422074 KMT2CQ8NEZ4 4911 aaKnown RBP-0.35□□□□□ -2.47
LINC00397-201ENST00000422074 SPG11Q96JI7 2443 aa-0.35□□□□□ -2.47
LINC00397-201ENST00000422074 ROCK2O75116 1388 aaKnown RBP-0.35□□□□□ -2.47
LINC00397-201ENST00000422074 SMG6Q86US8 1419 aaKnown RBP-0.36□□□□□ -2.47
LINC00397-201ENST00000422074 PKHD1P08F94 4074 aa-0.36□□□□□ -2.47
LINC00397-201ENST00000422074 OOSP1A8MZH6 123 aa-0.36□□□□□ -2.47
LINC00397-201ENST00000422074 M0R2T5 61 aa-0.36□□□□□ -2.47
LINC00397-201ENST00000422074 NALCNQ8IZF0 1738 aa-0.36□□□□□ -2.47
LINC00397-201ENST00000422074 FLGP20930 4061 aaPredicted RBP-0.36□□□□□ -2.47
LINC00397-201ENST00000422074 ARHGEF5Q12774 1597 aa-0.36□□□□□ -2.47
LINC00397-201ENST00000422074 NBASA2RRP1 2371 aa-0.37□□□□□ -2.47
LINC00397-201ENST00000422074 KNL1Q8NG31 2342 aa-0.37□□□□□ -2.47
LINC00397-201ENST00000422074 FAM24AA6NFZ4 105 aa-0.37□□□□□ -2.47
LINC00397-201ENST00000422074 GNG11P61952 73 aa-0.37□□□□□ -2.47
LINC00397-201ENST00000422074 DEFB123Q8N688 67 aa-0.37□□□□□ -2.47
LINC00397-201ENST00000422074 FDCSPQ8NFU4 85 aa-0.37□□□□□ -2.47
LINC00397-201ENST00000422074 TMEM263Q8WUH6 116 aaKnown RBP-0.37□□□□□ -2.47
LINC00397-201ENST00000422074 LINC00474Q9P2X8 69 aa-0.37□□□□□ -2.47
LINC00397-201ENST00000422074 FAT1Q14517 4588 aa-0.37□□□□□ -2.47
LINC00397-201ENST00000422074 MYOM2P54296 1465 aa-0.37□□□□□ -2.47
LINC00397-201ENST00000422074 GAPVD1Q14C86 1478 aa-0.37□□□□□ -2.47
LINC00397-201ENST00000422074 SVEP1Q4LDE5 3571 aa-0.37□□□□□ -2.47
LINC00397-201ENST00000422074 PCLOQ9Y6V0 5065 aa-0.38□□□□□ -2.47
LINC00397-201ENST00000422074 TRBV7-4A0A0J9YYF1 115 aa-0.38□□□□□ -2.47
LINC00397-201ENST00000422074 F6UZH7 168 aa-0.38□□□□□ -2.47
LINC00397-201ENST00000422074 SYS1-DBNDD2H3BUS1 97 aa-0.38□□□□□ -2.47
LINC00397-201ENST00000422074 IGLC1P0CG04 106 aa-0.38□□□□□ -2.47
LINC00397-201ENST00000422074 COX8AP10176 69 aa-0.38□□□□□ -2.47
LINC00397-201ENST00000422074 KLK9Q2XQG4 91 aa-0.38□□□□□ -2.47
LINC00397-201ENST00000422074 RPL13AP3Q6NVV1 102 aa-0.38□□□□□ -2.47
LINC00397-201ENST00000422074 FAM223AQ8IWN6 122 aa-0.38□□□□□ -2.47
LINC00397-201ENST00000422074 DEFB105AQ8NG35 78 aa-0.38□□□□□ -2.47
LINC00397-201ENST00000422074 ARL2-SNX15V9GYD0 113 aa-0.38□□□□□ -2.47
LINC00397-201ENST00000422074 IQSEC2Q5JU85 1478 aa-0.38□□□□□ -2.47
LINC00397-201ENST00000422074 TET3O43151 1660 aa-0.38□□□□□ -2.47
LINC00397-201ENST00000422074 NSD3Q9BZ95 1437 aa-0.38□□□□□ -2.47
LINC00397-201ENST00000422074 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.39□□□□□ -2.47
LINC00397-201ENST00000422074 C10orf113Q5VZT2 155 aa-0.39□□□□□ -2.47
LINC00397-201ENST00000422074 USMG5Q96IX5 58 aa-0.39□□□□□ -2.47
LINC00397-201ENST00000422074 MANBALQ9NQG1 85 aa-0.39□□□□□ -2.47
LINC00397-201ENST00000422074 EHBP1L1Q8N3D4 1523 aa-0.39□□□□□ -2.47
LINC00397-201ENST00000422074 ZFHX3Q15911 3703 aa-0.39□□□□□ -2.47
LINC00397-201ENST00000422074 MAGI1Q96QZ7 1491 aaPredicted RBP-0.4□□□□□ -2.47
LINC00397-201ENST00000422074 CDC42SE2Q9NRR3 84 aa-0.4□□□□□ -2.47
LINC00397-201ENST00000422074 TOP2BQ02880 1626 aa-0.4□□□□□ -2.47
LINC00397-201ENST00000422074 EIF4G3O43432 1585 aaKnown RBP-0.4□□□□□ -2.47
LINC00397-201ENST00000422074 SETBP1Q9Y6X0 1596 aa-0.4□□□□□ -2.47
LINC00397-201ENST00000422074 LAMA5O15230 3695 aa-0.41□□□□□ -2.47
LINC00397-201ENST00000422074 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.41□□□□□ -2.47
LINC00397-201ENST00000422074 SPRR2AP35326 72 aa-0.41□□□□□ -2.48
LINC00397-201ENST00000422074 KRTAP6-2Q3LI66 62 aa-0.41□□□□□ -2.48
LINC00397-201ENST00000422074 SVBPQ8N300 66 aa-0.41□□□□□ -2.48
LINC00397-201ENST00000422074 FAM167A-AS1Q96KT0 104 aa-0.41□□□□□ -2.48
LINC00397-201ENST00000422074 PRO1933Q9H354 126 aa-0.41□□□□□ -2.48
LINC00397-201ENST00000422074 SPTBN4Q9H254 2564 aa-0.41□□□□□ -2.48
LINC00397-201ENST00000422074 USP9YO00507 2555 aaPredicted RBP-0.42□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms