RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 LINC00526Q96FQ7 95 aa10.23□□□□□ -0.77
BRAT1-202ENST00000421712 AMELXQ99217 191 aa10.23□□□□□ -0.77
BRAT1-202ENST00000421712 GVQW2A0A096LPI5 108 aaPredicted RBP10.22□□□□□ -0.77
BRAT1-202ENST00000421712 UBE2D1P51668 147 aa10.22□□□□□ -0.77
BRAT1-202ENST00000421712 CNBPP62633 177 aaKnown RBP10.22□□□□□ -0.77
BRAT1-202ENST00000421712 PMCHL1Q16048 86 aa10.22□□□□□ -0.77
BRAT1-202ENST00000421712 LINC00242Q5T6M2 205 aa10.22□□□□□ -0.77
BRAT1-202ENST00000421712 BAGE3Q86Y29 109 aa10.22□□□□□ -0.77
BRAT1-202ENST00000421712 C9orf163Q8N9P6 203 aa10.22□□□□□ -0.77
BRAT1-202ENST00000421712 URB1-AS1Q96HZ7 61 aa10.22□□□□□ -0.77
BRAT1-202ENST00000421712 IGHV3OR16-9A0A0B4J2B5 98 aa10.21□□□□□ -0.77
BRAT1-202ENST00000421712 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.21□□□□□ -0.77
BRAT1-202ENST00000421712 HBDP02042 147 aa10.21□□□□□ -0.77
BRAT1-202ENST00000421712 SLPIP03973 132 aa10.21□□□□□ -0.77
BRAT1-202ENST00000421712 COX6A2Q02221 97 aa10.21□□□□□ -0.77
BRAT1-202ENST00000421712 LINC00173Q6ZV60 143 aa10.21□□□□□ -0.77
BRAT1-202ENST00000421712 FAM30AQ9NZY2 134 aa10.21□□□□□ -0.77
BRAT1-202ENST00000421712 IGHV3-64A0A075B6Q5 118 aa10.2□□□□□ -0.78
BRAT1-202ENST00000421712 NDUFA6P56556 154 aa10.2□□□□□ -0.78
BRAT1-202ENST00000421712 HAMPP81172 84 aa10.2□□□□□ -0.78
BRAT1-202ENST00000421712 XGP55808 180 aa10.19□□□□□ -0.78
BRAT1-202ENST00000421712 SEC11AP67812 179 aa10.19□□□□□ -0.78
BRAT1-202ENST00000421712 ORAOV1Q8WV07 137 aa10.19□□□□□ -0.78
BRAT1-202ENST00000421712 CHCHD1Q96BP2 118 aaKnown RBP10.19□□□□□ -0.78
BRAT1-202ENST00000421712 GEMIN7Q9H840 131 aaKnown RBP10.19□□□□□ -0.78
BRAT1-202ENST00000421712 KIAA1109Q2LD37 5005 aa10.19□□□□□ -0.78
BRAT1-202ENST00000421712 IGLV4-69A0A075B6H9 119 aa10.18□□□□□ -0.78
BRAT1-202ENST00000421712 SPAG11BQ08648 103 aa10.18□□□□□ -0.78
BRAT1-202ENST00000421712 A0A096LNJ9 63 aa10.17□□□□□ -0.78
BRAT1-202ENST00000421712 HSBP1O75506 76 aa10.17□□□□□ -0.78
BRAT1-202ENST00000421712 HERVK_113P63121 156 aa10.17□□□□□ -0.78
BRAT1-202ENST00000421712 SYCNQ0VAF6 134 aa10.17□□□□□ -0.78
BRAT1-202ENST00000421712 PMVKQ15126 192 aa10.17□□□□□ -0.78
BRAT1-202ENST00000421712 DPH3Q96FX2 82 aa10.17□□□□□ -0.78
BRAT1-202ENST00000421712 CARD19Q96LW7 228 aa10.17□□□□□ -0.78
BRAT1-202ENST00000421712 CST9LQ9H4G1 147 aa10.17□□□□□ -0.78
BRAT1-202ENST00000421712 A0A087WZ39 114 aa10.16□□□□□ -0.78
BRAT1-202ENST00000421712 A0A0J9YXV3 536 aa10.16□□□□□ -0.78
BRAT1-202ENST00000421712 ATP5LO75964 103 aa10.16□□□□□ -0.78
BRAT1-202ENST00000421712 OR10D4PQ8NGN7 298 aa10.16□□□□□ -0.78
BRAT1-202ENST00000421712 CAMK2N2Q96S95 79 aa10.16□□□□□ -0.78
BRAT1-202ENST00000421712 S100A1P23297 94 aa10.15□□□□□ -0.78
BRAT1-202ENST00000421712 SDIM1Q6ZPB5 146 aa10.15□□□□□ -0.78
BRAT1-202ENST00000421712 PACRGQ96M98 296 aaPredicted RBP10.15□□□□□ -0.78
BRAT1-202ENST00000421712 PDZD11Q5EBL8 140 aa10.14□□□□□ -0.79
BRAT1-202ENST00000421712 Q6ZSA8 131 aa10.14□□□□□ -0.79
BRAT1-202ENST00000421712 FAM19A3Q7Z5A8 133 aa10.14□□□□□ -0.79
BRAT1-202ENST00000421712 SMR3BP02814 79 aaPredicted RBP10.13□□□□□ -0.79
BRAT1-202ENST00000421712 FAM19A2Q8N3H0 131 aa10.13□□□□□ -0.79
BRAT1-202ENST00000421712 LINC00469Q8N7U9 141 aa10.13□□□□□ -0.79
BRAT1-202ENST00000421712 C2orf48Q96LS8 159 aa10.13□□□□□ -0.79
BRAT1-202ENST00000421712 CDKN2A-AS1Q9UH64 79 aa10.13□□□□□ -0.79
BRAT1-202ENST00000421712 APOBP04114 4563 aaKnown RBP10.13□□□□□ -0.79
BRAT1-202ENST00000421712 TINCRA0A1B0GVN0 87 aa10.12□□□□□ -0.79
BRAT1-202ENST00000421712 ATP6V1G1O75348 118 aa10.12□□□□□ -0.79
BRAT1-202ENST00000421712 SERF1AO75920 110 aa10.12□□□□□ -0.79
BRAT1-202ENST00000421712 PRSS2P07478 247 aa10.12□□□□□ -0.79
BRAT1-202ENST00000421712 Q6ZRU5 148 aa10.12□□□□□ -0.79
BRAT1-202ENST00000421712 LINC01561Q8N1V8 128 aa10.12□□□□□ -0.79
BRAT1-202ENST00000421712 CHAC1Q9BUX1 264 aa10.12□□□□□ -0.79
BRAT1-202ENST00000421712 TOMM7Q9P0U1 55 aa10.12□□□□□ -0.79
BRAT1-202ENST00000421712 NDUFA1O15239 70 aa10.11□□□□□ -0.79
BRAT1-202ENST00000421712 SCXQ7RTU7 201 aa10.11□□□□□ -0.79
BRAT1-202ENST00000421712 IFI27L1Q96BM0 104 aa10.11□□□□□ -0.79
BRAT1-202ENST00000421712 PKIGQ9Y2B9 76 aa10.11□□□□□ -0.79
BRAT1-202ENST00000421712 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.11□□□□□ -0.79
BRAT1-202ENST00000421712 HSPG2P98160 4391 aa10.1□□□□□ -0.79
BRAT1-202ENST00000421712 IGKV2-24A0A0C4DH68 120 aa10.1□□□□□ -0.79
BRAT1-202ENST00000421712 Q8N1X5 172 aa10.1□□□□□ -0.79
BRAT1-202ENST00000421712 F8WDY8 70 aa10.09□□□□□ -0.79
BRAT1-202ENST00000421712 CHTF8P0CG12 524 aa10.09□□□□□ -0.79
BRAT1-202ENST00000421712 C6orf226Q5I0X4 101 aa10.09□□□□□ -0.79
BRAT1-202ENST00000421712 CIRBP-AS1Q8TBR5 109 aa10.09□□□□□ -0.79
BRAT1-202ENST00000421712 H3BRM9 83 aa10.08□□□□□ -0.8
BRAT1-202ENST00000421712 PANO1I0J062 215 aa10.08□□□□□ -0.8
BRAT1-202ENST00000421712 CKS1BP61024 79 aa10.08□□□□□ -0.8
BRAT1-202ENST00000421712 MAJINQ3KP22 176 aa10.08□□□□□ -0.8
BRAT1-202ENST00000421712 UNQ6190/PRO20217Q6UXQ8 127 aa10.08□□□□□ -0.8
BRAT1-202ENST00000421712 LOC107984640A0A0U1RRK4 108 aa10.07□□□□□ -0.8
BRAT1-202ENST00000421712 EPM2AB3EWF7 344 aa10.07□□□□□ -0.8
BRAT1-202ENST00000421712 FAM229AH3BQW9 127 aa10.07□□□□□ -0.8
BRAT1-202ENST00000421712 NUPR1O60356 82 aa10.07□□□□□ -0.8
BRAT1-202ENST00000421712 LEPROTL1O95214 131 aa10.07□□□□□ -0.8
BRAT1-202ENST00000421712 LINC00310P59036 64 aa10.07□□□□□ -0.8
BRAT1-202ENST00000421712 GAGE2BQ13066 116 aa10.07□□□□□ -0.8
BRAT1-202ENST00000421712 KIAA0087Q14695 138 aa10.07□□□□□ -0.8
BRAT1-202ENST00000421712 CHTOPQ9Y3Y2 248 aaKnown RBP10.07□□□□□ -0.8
BRAT1-202ENST00000421712 H0Y8G0 127 aa10.06□□□□□ -0.8
BRAT1-202ENST00000421712 HIST1H2BKO60814 126 aa10.06□□□□□ -0.8
BRAT1-202ENST00000421712 HIST1H2BJP06899 126 aa10.06□□□□□ -0.8
BRAT1-202ENST00000421712 SPINK8P0C7L1 97 aa10.06□□□□□ -0.8
BRAT1-202ENST00000421712 IGLC3P0DOY3 106 aa10.06□□□□□ -0.8
BRAT1-202ENST00000421712 FABP4P15090 132 aa10.06□□□□□ -0.8
BRAT1-202ENST00000421712 HIST1H2BOP23527 126 aa10.06□□□□□ -0.8
BRAT1-202ENST00000421712 HIST1H2BBP33778 126 aa10.06□□□□□ -0.8
BRAT1-202ENST00000421712 HIST1H2BDP58876 126 aa10.06□□□□□ -0.8
BRAT1-202ENST00000421712 HIST1H2BCP62807 126 aa10.06□□□□□ -0.8
BRAT1-202ENST00000421712 HIST2H2BEQ16778 126 aa10.06□□□□□ -0.8
BRAT1-202ENST00000421712 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.06□□□□□ -0.8
BRAT1-202ENST00000421712 C10orf25Q5T742 122 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms