RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 SMIM6P0DI80 62 aa14.43□□□□□ -0.1
ABCF3-202ENST00000421340 ZNF22P17026 224 aaPredicted RBP14.43□□□□□ -0.1
ABCF3-202ENST00000421340 XCL1P47992 114 aa14.43□□□□□ -0.1
ABCF3-202ENST00000421340 LINC01561Q8N1V8 128 aa14.43□□□□□ -0.1
ABCF3-202ENST00000421340 C1orf43Q9BWL3 253 aa14.43□□□□□ -0.1
ABCF3-202ENST00000421340 KRTAP1-5Q9BYS1 174 aa14.43□□□□□ -0.1
ABCF3-202ENST00000421340 COX11Q9Y6N1 276 aa14.43□□□□□ -0.1
ABCF3-202ENST00000421340 IGLV10-54A0A075B6I4 117 aa14.42□□□□□ -0.1
ABCF3-202ENST00000421340 H3BRM9 83 aa14.42□□□□□ -0.1
ABCF3-202ENST00000421340 TMEM170BQ5T4T1 132 aa14.42□□□□□ -0.1
ABCF3-202ENST00000421340 KRTAP26-1Q6PEX3 210 aa14.42□□□□□ -0.1
ABCF3-202ENST00000421340 LINC00469Q8N7U9 141 aa14.42□□□□□ -0.1
ABCF3-202ENST00000421340 CDKN2A-AS1Q9UH64 79 aa14.42□□□□□ -0.1
ABCF3-202ENST00000421340 A0A087WZ39 114 aa14.41□□□□□ -0.1
ABCF3-202ENST00000421340 FOXI1Q12951 378 aa14.41□□□□□ -0.1
ABCF3-202ENST00000421340 GAGE12HA6NDE8 117 aa14.4□□□□□ -0.1
ABCF3-202ENST00000421340 Q6ZR54 194 aa14.4□□□□□ -0.1
ABCF3-202ENST00000421340 ATOH7Q8N100 152 aa14.4□□□□□ -0.1
ABCF3-202ENST00000421340 TM2D2Q9BX73 214 aa14.4□□□□□ -0.1
ABCF3-202ENST00000421340 IGKV2D-24A0A075B6R9 120 aa14.39□□□□□ -0.11
ABCF3-202ENST00000421340 TMEM223A0PJW6 202 aa14.39□□□□□ -0.11
ABCF3-202ENST00000421340 Q9HAA7 133 aa14.39□□□□□ -0.11
ABCF3-202ENST00000421340 COX7A2LO14548 114 aa14.38□□□□□ -0.11
ABCF3-202ENST00000421340 VPS13DQ5THJ4 4388 aa14.38□□□□□ -0.11
ABCF3-202ENST00000421340 HSBP1L1C9JCN9 74 aa14.37□□□□□ -0.11
ABCF3-202ENST00000421340 HERVK_113P61574 105 aa14.37□□□□□ -0.11
ABCF3-202ENST00000421340 STPG4Q8N801 248 aa14.36□□□□□ -0.11
ABCF3-202ENST00000421340 C5orf38Q86SI9 138 aa14.35□□□□□ -0.11
ABCF3-202ENST00000421340 hDV102S1A0JD36 115 aa14.34□□□□□ -0.11
ABCF3-202ENST00000421340 VAMP8Q9BV40 100 aa14.34□□□□□ -0.11
ABCF3-202ENST00000421340 LYSTQ99698 3801 aa14.34□□□□□ -0.11
ABCF3-202ENST00000421340 IGHV1-58A0A0C4DH39 117 aa14.33□□□□□ -0.12
ABCF3-202ENST00000421340 IGLV5-39A0A0G2JS06 123 aa14.33□□□□□ -0.12
ABCF3-202ENST00000421340 SMIM1B2RUZ4 78 aa14.33□□□□□ -0.12
ABCF3-202ENST00000421340 E9PLD3 99 aa14.33□□□□□ -0.12
ABCF3-202ENST00000421340 S100A12P80511 92 aa14.33□□□□□ -0.12
ABCF3-202ENST00000421340 DNAH1Q9P2D7 4330 aa14.32□□□□□ -0.12
ABCF3-202ENST00000421340 APOMO95445 188 aa14.32□□□□□ -0.12
ABCF3-202ENST00000421340 SPINK8P0C7L1 97 aa14.32□□□□□ -0.12
ABCF3-202ENST00000421340 MALP21145 153 aa14.32□□□□□ -0.12
ABCF3-202ENST00000421340 MAJINQ3KP22 176 aa14.32□□□□□ -0.12
ABCF3-202ENST00000421340 CDPF1Q6NVV7 123 aa14.32□□□□□ -0.12
ABCF3-202ENST00000421340 ALMS1Q8TCU4 4167 aa14.32□□□□□ -0.12
ABCF3-202ENST00000421340 LCE6AA0A183 80 aa14.31□□□□□ -0.12
ABCF3-202ENST00000421340 M0R2N4 97 aa14.31□□□□□ -0.12
ABCF3-202ENST00000421340 IGHV3-64A0A075B6Q5 118 aa14.3□□□□□ -0.12
ABCF3-202ENST00000421340 LEPROTO15243 131 aa14.3□□□□□ -0.12
ABCF3-202ENST00000421340 ANKRD39Q53RE8 183 aa14.3□□□□□ -0.12
ABCF3-202ENST00000421340 CFAP161Q6P656 301 aa14.3□□□□□ -0.12
ABCF3-202ENST00000421340 PLEKHB2Q96CS7 222 aa14.3□□□□□ -0.12
ABCF3-202ENST00000421340 LINC00518Q8N0U6 118 aa14.29□□□□□ -0.12
ABCF3-202ENST00000421340 C6orf223Q8N319 242 aa14.29□□□□□ -0.12
ABCF3-202ENST00000421340 Q6ZRN7 208 aaPredicted RBP14.28□□□□□ -0.12
ABCF3-202ENST00000421340 MAPKAPK5-AS1Q8N8E1 139 aa14.28□□□□□ -0.12
ABCF3-202ENST00000421340 C12orf57Q99622 126 aa14.28□□□□□ -0.12
ABCF3-202ENST00000421340 SPATA45Q537H7 98 aa14.27□□□□□ -0.13
ABCF3-202ENST00000421340 PAM16Q9Y3D7 125 aa14.27□□□□□ -0.13
ABCF3-202ENST00000421340 Q8IZM0 81 aa14.26□□□□□ -0.13
ABCF3-202ENST00000421340 J3QQQ9 107 aa14.25□□□□□ -0.13
ABCF3-202ENST00000421340 PSCAO43653 123 aa14.25□□□□□ -0.13
ABCF3-202ENST00000421340 C1orf134Q5TEV5 83 aa14.25□□□□□ -0.13
ABCF3-202ENST00000421340 COX7B2Q8TF08 81 aa14.25□□□□□ -0.13
ABCF3-202ENST00000421340 IGKV2D-26A0A0A0MRZ7 120 aa14.24□□□□□ -0.13
ABCF3-202ENST00000421340 ORAOV1Q8WV07 137 aa14.24□□□□□ -0.13
ABCF3-202ENST00000421340 KIAA0087Q14695 138 aa14.23□□□□□ -0.13
ABCF3-202ENST00000421340 C15orf56Q8N910 161 aa14.23□□□□□ -0.13
ABCF3-202ENST00000421340 F8WDY8 70 aa14.22□□□□□ -0.13
ABCF3-202ENST00000421340 PRSS2P07478 247 aa14.22□□□□□ -0.13
ABCF3-202ENST00000421340 LGALS3P17931 250 aaKnown RBP14.22□□□□□ -0.13
ABCF3-202ENST00000421340 NMUP48645 174 aa14.22□□□□□ -0.13
ABCF3-202ENST00000421340 C6orf226Q5I0X4 101 aa14.22□□□□□ -0.13
ABCF3-202ENST00000421340 SFTA2Q6UW10 78 aa14.22□□□□□ -0.13
ABCF3-202ENST00000421340 DNAH6Q9C0G6 4158 aa14.21□□□□□ -0.13
ABCF3-202ENST00000421340 GVQW2A0A096LPI5 108 aaPredicted RBP14.21□□□□□ -0.13
ABCF3-202ENST00000421340 USP17L23D6RBM5 183 aa14.2□□□□□ -0.14
ABCF3-202ENST00000421340 COX8AP10176 69 aa14.2□□□□□ -0.14
ABCF3-202ENST00000421340 CXCL5P42830 114 aa14.2□□□□□ -0.14
ABCF3-202ENST00000421340 TSPEAR-AS2P59090 65 aa14.2□□□□□ -0.14
ABCF3-202ENST00000421340 TOMM7Q9P0U1 55 aa14.2□□□□□ -0.14
ABCF3-202ENST00000421340 ZNF561-AS1K7EIQ3 104 aa14.19□□□□□ -0.14
ABCF3-202ENST00000421340 DLEU1O43261 78 aa14.19□□□□□ -0.14
ABCF3-202ENST00000421340 SPAG11BQ08648 103 aa14.19□□□□□ -0.14
ABCF3-202ENST00000421340 C2orf48Q96LS8 159 aa14.19□□□□□ -0.14
ABCF3-202ENST00000421340 C14orf177Q52M58 125 aa14.18□□□□□ -0.14
ABCF3-202ENST00000421340 NTN5Q8WTR8 489 aaPredicted RBP14.18□□□□□ -0.14
ABCF3-202ENST00000421340 MYMXA0A1B0GTQ4 84 aa14.17□□□□□ -0.14
ABCF3-202ENST00000421340 LRCOL1A6NCL2 159 aa14.17□□□□□ -0.14
ABCF3-202ENST00000421340 NDUFA1O15239 70 aa14.17□□□□□ -0.14
ABCF3-202ENST00000421340 PCP2Q8IVA1 136 aa14.17□□□□□ -0.14
ABCF3-202ENST00000421340 BOD1L2Q8IYS8 172 aa14.17□□□□□ -0.14
ABCF3-202ENST00000421340 ZNF625Q96I27 306 aaPredicted RBP14.17□□□□□ -0.14
ABCF3-202ENST00000421340 NDUFA12Q9UI09 145 aa14.17□□□□□ -0.14
ABCF3-202ENST00000421340 CKS1BP61024 79 aa14.15□□□□□ -0.14
ABCF3-202ENST00000421340 HERV-K104P63124 156 aa14.15□□□□□ -0.14
ABCF3-202ENST00000421340 C14orf144Q96I85 54 aa14.15□□□□□ -0.14
ABCF3-202ENST00000421340 ZNF815PA8K554 130 aa14.14□□□□□ -0.15
ABCF3-202ENST00000421340 HIGD2BQ4VC39 106 aa14.14□□□□□ -0.15
ABCF3-202ENST00000421340 SLC25A34Q6PIV7 304 aa14.14□□□□□ -0.15
ABCF3-202ENST00000421340 KMT2AQ03164 3969 aa14.14□□□□□ -0.15
ABCF3-202ENST00000421340 TTTY13Q9BZ97 58 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms