RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 TRBV6-4A0A1B0GX49 114 aa6.18□□□□□ -1.42
SNCA-206ENST00000420646 UBE2L6O14933 153 aa6.18□□□□□ -1.42
SNCA-206ENST00000420646 GYPEP15421 78 aa6.18□□□□□ -1.42
SNCA-206ENST00000420646 MUSTN1Q8IVN3 82 aa6.18□□□□□ -1.42
SNCA-206ENST00000420646 TMEM101Q96IK0 257 aa6.18□□□□□ -1.42
SNCA-206ENST00000420646 CDC42SE2Q9NRR3 84 aa6.18□□□□□ -1.42
SNCA-206ENST00000420646 CMYA5Q8N3K9 4069 aa6.17□□□□□ -1.42
SNCA-206ENST00000420646 A4D1N5 150 aa6.17□□□□□ -1.42
SNCA-206ENST00000420646 CFC1BP0CG36 223 aa6.17□□□□□ -1.42
SNCA-206ENST00000420646 CFC1P0CG37 223 aa6.17□□□□□ -1.42
SNCA-206ENST00000420646 SBSPONQ8IVN8 264 aa6.17□□□□□ -1.42
SNCA-206ENST00000420646 Q8N3U1 123 aa6.17□□□□□ -1.42
SNCA-206ENST00000420646 CHCHD5Q9BSY4 110 aa6.17□□□□□ -1.42
SNCA-206ENST00000420646 CELA1Q9UNI1 258 aa6.17□□□□□ -1.42
SNCA-206ENST00000420646 KRTAP24-1Q3LI83 254 aa6.17□□□□□ -1.42
SNCA-206ENST00000420646 CLPSL2Q6UWE3 100 aa6.17□□□□□ -1.42
SNCA-206ENST00000420646 TMEM243Q9BU79 118 aa6.17□□□□□ -1.42
SNCA-206ENST00000420646 IGHV4-28A0A0C4DH34 117 aa6.16□□□□□ -1.42
SNCA-206ENST00000420646 LOC107984156A0A0G2JMH3 177 aa6.16□□□□□ -1.42
SNCA-206ENST00000420646 HTN3P15516 51 aa6.16□□□□□ -1.42
SNCA-206ENST00000420646 INSL3P51460 131 aa6.16□□□□□ -1.42
SNCA-206ENST00000420646 ARL17AQ8IVW1 177 aa6.16□□□□□ -1.42
SNCA-206ENST00000420646 IGHV4-30-4P0DP06 118 aa6.16□□□□□ -1.42
SNCA-206ENST00000420646 GAGE12HA6NDE8 117 aa6.16□□□□□ -1.42
SNCA-206ENST00000420646 TSPAN13O95857 204 aa6.16□□□□□ -1.42
SNCA-206ENST00000420646 TRBV6-8A0A0A6YYG3 113 aa6.15□□□□□ -1.42
SNCA-206ENST00000420646 A0A1B0GWB2 263 aa6.15□□□□□ -1.42
SNCA-206ENST00000420646 TMEM262E9PQX1 116 aa6.15□□□□□ -1.42
SNCA-206ENST00000420646 LITAFQ99732 161 aa6.15□□□□□ -1.42
SNCA-206ENST00000420646 RETNQ9HD89 108 aa6.15□□□□□ -1.42
SNCA-206ENST00000420646 WFDC2Q14508 124 aa6.15□□□□□ -1.43
SNCA-206ENST00000420646 J3QR89 54 aa6.14□□□□□ -1.43
SNCA-206ENST00000420646 KRTAP10-11P60412 298 aa6.14□□□□□ -1.43
SNCA-206ENST00000420646 SH2D6Q7Z4S9 175 aa6.14□□□□□ -1.43
SNCA-206ENST00000420646 Q9H8V8 135 aa6.14□□□□□ -1.43
SNCA-206ENST00000420646 SMIM1B2RUZ4 78 aa6.14□□□□□ -1.43
SNCA-206ENST00000420646 SHISA2Q6UWI4 295 aa6.14□□□□□ -1.43
SNCA-206ENST00000420646 KIR2DL5BQ8NHK3 375 aa6.14□□□□□ -1.43
SNCA-206ENST00000420646 WFDC9Q8NEX5 89 aa6.13□□□□□ -1.43
SNCA-206ENST00000420646 ATP6V0E2Q8NHE4 81 aa6.13□□□□□ -1.43
SNCA-206ENST00000420646 SPANXB1Q9NS25 103 aaPredicted RBP6.13□□□□□ -1.43
SNCA-206ENST00000420646 TOMM7Q9P0U1 55 aa6.13□□□□□ -1.43
SNCA-206ENST00000420646 SS18L2Q9UHA2 77 aa6.13□□□□□ -1.43
SNCA-206ENST00000420646 A6NJY4 79 aa6.13□□□□□ -1.43
SNCA-206ENST00000420646 C5orf38Q86SI9 138 aa6.13□□□□□ -1.43
SNCA-206ENST00000420646 PAX4O43316 350 aa6.12□□□□□ -1.43
SNCA-206ENST00000420646 PRB2P02812 416 aaPredicted RBP6.12□□□□□ -1.43
SNCA-206ENST00000420646 PSMB2P49721 201 aa6.12□□□□□ -1.43
SNCA-206ENST00000420646 TIRAPP58753 221 aa6.12□□□□□ -1.43
SNCA-206ENST00000420646 SPATA25Q9BR10 227 aa6.12□□□□□ -1.43
SNCA-206ENST00000420646 C11orf68Q9H3H3 251 aaKnown RBP6.12□□□□□ -1.43
SNCA-206ENST00000420646 IGLV5-45A0A087WSX0 123 aa6.12□□□□□ -1.43
SNCA-206ENST00000420646 F5H768 121 aa6.12□□□□□ -1.43
SNCA-206ENST00000420646 HERVK_113P63121 156 aa6.12□□□□□ -1.43
SNCA-206ENST00000420646 ZFAND6Q6FIF0 208 aa6.12□□□□□ -1.43
SNCA-206ENST00000420646 LINC00612Q8N6U2 182 aa6.12□□□□□ -1.43
SNCA-206ENST00000420646 CSDC2Q9Y534 153 aaKnown RBP6.12□□□□□ -1.43
SNCA-206ENST00000420646 APOC4P55056 127 aa6.12□□□□□ -1.43
SNCA-206ENST00000420646 Q8NAQ8 132 aa6.12□□□□□ -1.43
SNCA-206ENST00000420646 PRO1854Q9UHT4 67 aa6.12□□□□□ -1.43
SNCA-206ENST00000420646 PRO0255Q9UI72 69 aa6.12□□□□□ -1.43
SNCA-206ENST00000420646 F8W1H4 67 aa6.11□□□□□ -1.43
SNCA-206ENST00000420646 XCL1P47992 114 aa6.11□□□□□ -1.43
SNCA-206ENST00000420646 DAD1P61803 113 aa6.11□□□□□ -1.43
SNCA-206ENST00000420646 ETDBQ3ZM63 59 aa6.11□□□□□ -1.43
SNCA-206ENST00000420646 C3orf56Q8N813 242 aa6.11□□□□□ -1.43
SNCA-206ENST00000420646 IGLV10-54A0A075B6I4 117 aa6.1□□□□□ -1.43
SNCA-206ENST00000420646 IGLV5-39A0A0G2JS06 123 aa6.1□□□□□ -1.43
SNCA-206ENST00000420646 SMIM9A6NGZ8 99 aa6.1□□□□□ -1.43
SNCA-206ENST00000420646 SCGB1C2P0DMR2 95 aa6.1□□□□□ -1.43
SNCA-206ENST00000420646 TCL1BO95988 128 aa6.1□□□□□ -1.43
SNCA-206ENST00000420646 Q1RN00 199 aa6.1□□□□□ -1.43
SNCA-206ENST00000420646 IGHV3-33P01772 117 aa6.09□□□□□ -1.43
SNCA-206ENST00000420646 COL7A1Q02388 2944 aa6.09□□□□□ -1.43
SNCA-206ENST00000420646 NDUFA1O15239 70 aa6.09□□□□□ -1.43
SNCA-206ENST00000420646 MEIG1Q5JSS6 88 aa6.09□□□□□ -1.43
SNCA-206ENST00000420646 SOSTDC1Q6X4U4 206 aa6.09□□□□□ -1.43
SNCA-206ENST00000420646 MIAQ16674 131 aa6.08□□□□□ -1.44
SNCA-206ENST00000420646 LINC00269Q8N2A0 174 aa6.08□□□□□ -1.44
SNCA-206ENST00000420646 RNF183Q96D59 192 aa6.08□□□□□ -1.44
SNCA-206ENST00000420646 LYRM9A8MSI8 78 aa6.08□□□□□ -1.44
SNCA-206ENST00000420646 SMCPP49901 116 aaPredicted RBP6.08□□□□□ -1.44
SNCA-206ENST00000420646 MEGF8Q7Z7M0 2845 aa6.08□□□□□ -1.44
SNCA-206ENST00000420646 IGHV3OR16-9A0A0B4J2B5 98 aa6.08□□□□□ -1.44
SNCA-206ENST00000420646 LINC00959A0A1B0GUT2 108 aa6.08□□□□□ -1.44
SNCA-206ENST00000420646 PRO0461Q9UI25 63 aa6.08□□□□□ -1.44
SNCA-206ENST00000420646 ERG28Q9UKR5 140 aa6.08□□□□□ -1.44
SNCA-206ENST00000420646 ATP5G1P05496 136 aa6.07□□□□□ -1.44
SNCA-206ENST00000420646 TENM2Q9NT68 2774 aa6.07□□□□□ -1.44
SNCA-206ENST00000420646 SPART-AS1P0CW21 52 aa6.06□□□□□ -1.44
SNCA-206ENST00000420646 PFN2P35080 140 aa6.06□□□□□ -1.44
SNCA-206ENST00000420646 C2orf82Q6UX34 121 aa6.06□□□□□ -1.44
SNCA-206ENST00000420646 LINC00308Q8TCZ7 52 aa6.06□□□□□ -1.44
SNCA-206ENST00000420646 TRIAP1O43715 76 aa6.06□□□□□ -1.44
SNCA-206ENST00000420646 MT-ATP8P03928 68 aa6.06□□□□□ -1.44
SNCA-206ENST00000420646 ANGP03950 147 aaKnown RBP6.06□□□□□ -1.44
SNCA-206ENST00000420646 MIFP14174 115 aa6.06□□□□□ -1.44
SNCA-206ENST00000420646 HERV-K104P63124 156 aa6.06□□□□□ -1.44
SNCA-206ENST00000420646 FAM19A3Q7Z5A8 133 aa6.06□□□□□ -1.44
SNCA-206ENST00000420646 LYSTQ99698 3801 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms