RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 APOC3P02656 99 aa7.81□□□□□ -1.16
LINC00339-203ENST00000420503 MT-ND6P03923 174 aa7.81□□□□□ -1.16
LINC00339-203ENST00000420503 POLR2KP53803 58 aaKnown RBP7.81□□□□□ -1.16
LINC00339-203ENST00000420503 SLC7A5P1Q8MH63 180 aa7.81□□□□□ -1.16
LINC00339-203ENST00000420503 TRBV24-1A0A075B6N3 115 aa7.8□□□□□ -1.16
LINC00339-203ENST00000420503 RPL18AQ02543 176 aaKnown RBP7.8□□□□□ -1.16
LINC00339-203ENST00000420503 SS18Q15532 418 aa7.8□□□□□ -1.16
LINC00339-203ENST00000420503 SVBPQ8N300 66 aa7.8□□□□□ -1.16
LINC00339-203ENST00000420503 TMEM101Q96IK0 257 aa7.8□□□□□ -1.16
LINC00339-203ENST00000420503 RPS10P5Q9NQ39 176 aa7.8□□□□□ -1.16
LINC00339-203ENST00000420503 TRBV27A0A0K0K1C4 114 aa7.79□□□□□ -1.16
LINC00339-203ENST00000420503 D6R8Y8 96 aa7.79□□□□□ -1.16
LINC00339-203ENST00000420503 C5orf38Q86SI9 138 aa7.79□□□□□ -1.16
LINC00339-203ENST00000420503 ZNF664Q8N3J9 261 aa7.79□□□□□ -1.16
LINC00339-203ENST00000420503 CAMK2N2Q96S95 79 aa7.79□□□□□ -1.16
LINC00339-203ENST00000420503 ST20Q9HBF5 79 aa7.79□□□□□ -1.16
LINC00339-203ENST00000420503 SNAPINO95295 136 aa7.78□□□□□ -1.16
LINC00339-203ENST00000420503 APOMO95445 188 aa7.78□□□□□ -1.16
LINC00339-203ENST00000420503 PPP1R17O96001 155 aa7.78□□□□□ -1.16
LINC00339-203ENST00000420503 CKS2P33552 79 aa7.78□□□□□ -1.16
LINC00339-203ENST00000420503 SUMO2P61956 95 aaKnown RBP7.78□□□□□ -1.16
LINC00339-203ENST00000420503 NDUFA5Q16718 116 aa7.78□□□□□ -1.16
LINC00339-203ENST00000420503 TMEM136Q6ZRR5 245 aa7.78□□□□□ -1.16
LINC00339-203ENST00000420503 MRPL52Q86TS9 123 aaKnown RBP7.78□□□□□ -1.16
LINC00339-203ENST00000420503 TRAV13-1A0A0B4J241 112 aa7.77□□□□□ -1.17
LINC00339-203ENST00000420503 COX7A2LO14548 114 aa7.77□□□□□ -1.17
LINC00339-203ENST00000420503 TNFRSF6BO95407 300 aa7.77□□□□□ -1.17
LINC00339-203ENST00000420503 PPBPP02775 128 aa7.77□□□□□ -1.17
LINC00339-203ENST00000420503 IGLV7-43P04211 117 aa7.77□□□□□ -1.17
LINC00339-203ENST00000420503 MALP21145 153 aa7.77□□□□□ -1.17
LINC00339-203ENST00000420503 S100PP25815 95 aa7.77□□□□□ -1.17
LINC00339-203ENST00000420503 RPL32P62910 135 aaKnown RBP7.77□□□□□ -1.17
LINC00339-203ENST00000420503 Q6ZUT4 128 aa7.77□□□□□ -1.17
LINC00339-203ENST00000420503 KRTAP7-1Q8IUC3 87 aa7.77□□□□□ -1.17
LINC00339-203ENST00000420503 C20orf78Q9BR46 151 aa7.77□□□□□ -1.17
LINC00339-203ENST00000420503 KRTAP9-2Q9BYQ4 174 aa7.77□□□□□ -1.17
LINC00339-203ENST00000420503 NPYP01303 97 aa7.76□□□□□ -1.17
LINC00339-203ENST00000420503 KRTAP1-4P0C5Y4 121 aa7.76□□□□□ -1.17
LINC00339-203ENST00000420503 C10orf25Q5T742 122 aa7.76□□□□□ -1.17
LINC00339-203ENST00000420503 ORMDL3Q8N138 153 aa7.76□□□□□ -1.17
LINC00339-203ENST00000420503 PKIGQ9Y2B9 76 aa7.76□□□□□ -1.17
LINC00339-203ENST00000420503 VCYO14598 125 aa7.75□□□□□ -1.17
LINC00339-203ENST00000420503 SPAG11BQ08648 103 aa7.75□□□□□ -1.17
LINC00339-203ENST00000420503 UBE2D4Q9Y2X8 147 aa7.75□□□□□ -1.17
LINC00339-203ENST00000420503 A0A087WZ39 114 aa7.74□□□□□ -1.17
LINC00339-203ENST00000420503 PRSS47A8MTI9 375 aa7.74□□□□□ -1.17
LINC00339-203ENST00000420503 FAM19A5Q7Z5A7 132 aaPredicted RBP7.74□□□□□ -1.17
LINC00339-203ENST00000420503 FAM104AQ969W3 186 aa7.74□□□□□ -1.17
LINC00339-203ENST00000420503 PRELID3AQ96N28 172 aa7.74□□□□□ -1.17
LINC00339-203ENST00000420503 YPEL4Q96NS1 127 aa7.74□□□□□ -1.17
LINC00339-203ENST00000420503 SMIM2Q9BVW6 85 aa7.74□□□□□ -1.17
LINC00339-203ENST00000420503 GNB1LQ9BYB4 327 aa7.74□□□□□ -1.17
LINC00339-203ENST00000420503 LAMTOR2Q9Y2Q5 125 aa7.74□□□□□ -1.17
LINC00339-203ENST00000420503 H0Y9J4 135 aa7.73□□□□□ -1.17
LINC00339-203ENST00000420503 COX19Q49B96 90 aa7.73□□□□□ -1.17
LINC00339-203ENST00000420503 TGIF2-C20orf24A0A0A6YYL0 155 aa7.72□□□□□ -1.17
LINC00339-203ENST00000420503 C1orf196B1AJZ1 125 aa7.72□□□□□ -1.17
LINC00339-203ENST00000420503 PRR4Q16378 134 aa7.72□□□□□ -1.17
LINC00339-203ENST00000420503 DIRC1Q969H9 104 aa7.72□□□□□ -1.17
LINC00339-203ENST00000420503 C2orf48Q96LS8 159 aa7.72□□□□□ -1.17
LINC00339-203ENST00000420503 KIR2DL4Q99706 377 aa7.72□□□□□ -1.17
LINC00339-203ENST00000420503 FAT4Q6V0I7 4981 aa7.71□□□□□ -1.17
LINC00339-203ENST00000420503 RPL39P62891 51 aaKnown RBP7.71□□□□□ -1.18
LINC00339-203ENST00000420503 UNQ6190/PRO20217Q6UXQ8 127 aa7.71□□□□□ -1.18
LINC00339-203ENST00000420503 C6orf48Q9UBA6 75 aa7.71□□□□□ -1.18
LINC00339-203ENST00000420503 FCER1GP30273 86 aa7.7□□□□□ -1.18
LINC00339-203ENST00000420503 KIAA1644Q3SXP7 199 aa7.7□□□□□ -1.18
LINC00339-203ENST00000420503 GAGE2EQ4V326 116 aa7.7□□□□□ -1.18
LINC00339-203ENST00000420503 ORAOV1Q8WV07 137 aa7.7□□□□□ -1.18
LINC00339-203ENST00000420503 GAGE2DQ9UEU5 116 aa7.7□□□□□ -1.18
LINC00339-203ENST00000420503 TCAPO15273 167 aa7.69□□□□□ -1.18
LINC00339-203ENST00000420503 CBLN2Q8IUK8 224 aa7.69□□□□□ -1.18
LINC00339-203ENST00000420503 ALKBH7Q9BT30 221 aaPredicted RBP7.69□□□□□ -1.18
LINC00339-203ENST00000420503 MRPL18Q9H0U6 180 aaKnown RBP7.69□□□□□ -1.18
LINC00339-203ENST00000420503 MAP1LC3AQ9H492 121 aa7.69□□□□□ -1.18
LINC00339-203ENST00000420503 LOC100996750A0A140TA64 210 aa7.68□□□□□ -1.18
LINC00339-203ENST00000420503 RNF151Q2KHN1 245 aa7.68□□□□□ -1.18
LINC00339-203ENST00000420503 Q8N8P6 123 aa7.68□□□□□ -1.18
LINC00339-203ENST00000420503 KRTAP4-6Q9BYQ5 205 aa7.68□□□□□ -1.18
LINC00339-203ENST00000420503 MRPL35Q9NZE8 188 aaKnown RBP7.68□□□□□ -1.18
LINC00339-203ENST00000420503 CSDC2Q9Y534 153 aaKnown RBP7.68□□□□□ -1.18
LINC00339-203ENST00000420503 IGLV1-50A0A075B6I6 118 aa7.67□□□□□ -1.18
LINC00339-203ENST00000420503 IGHV3OR16-9A0A0B4J2B5 98 aa7.67□□□□□ -1.18
LINC00339-203ENST00000420503 LOC389332A0A1B0GUA5 103 aa7.67□□□□□ -1.18
LINC00339-203ENST00000420503 SMCO4Q9NRQ5 59 aa7.67□□□□□ -1.18
LINC00339-203ENST00000420503 M0QXV9 152 aa7.66□□□□□ -1.18
LINC00339-203ENST00000420503 TSPAN13O95857 204 aa7.66□□□□□ -1.18
LINC00339-203ENST00000420503 IFI27P40305 119 aaPredicted RBP7.66□□□□□ -1.18
LINC00339-203ENST00000420503 FABP9Q0Z7S8 132 aa7.66□□□□□ -1.18
LINC00339-203ENST00000420503 OR10D4PQ8NGN7 298 aa7.66□□□□□ -1.18
LINC00339-203ENST00000420503 TIMM21Q9BVV7 248 aa7.66□□□□□ -1.18
LINC00339-203ENST00000420503 TRAPPC1Q9Y5R8 145 aa7.66□□□□□ -1.18
LINC00339-203ENST00000420503 K7EMI3 77 aa7.65□□□□□ -1.18
LINC00339-203ENST00000420503 NDUFA1O15239 70 aa7.65□□□□□ -1.18
LINC00339-203ENST00000420503 RAB5AP20339 215 aa7.65□□□□□ -1.18
LINC00339-203ENST00000420503 C9orf129Q5T035 196 aaKnown RBP7.65□□□□□ -1.18
LINC00339-203ENST00000420503 LCE2AQ5TA79 106 aaPredicted RBP7.65□□□□□ -1.18
LINC00339-203ENST00000420503 C2orf82Q6UX34 121 aa7.65□□□□□ -1.18
LINC00339-203ENST00000420503 TMEM18Q96B42 140 aa7.65□□□□□ -1.18
LINC00339-203ENST00000420503 NXT2Q9NPJ8 142 aaKnown RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms